RNA–Protein interactions for RNA: ENST00000469939.1

TTC3-213, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-213ENST00000469939 TMEM167BQ9NRX6 74 aa1.17□□□□□ -2.22
TTC3-213ENST00000469939 TNRC6CQ9HCJ0 1690 aaKnown RBP1.16□□□□□ -2.22
TTC3-213ENST00000469939 A0A087WVE0 104 aa1.16□□□□□ -2.22
TTC3-213ENST00000469939 IGIPA6NJ69 53 aa1.16□□□□□ -2.22
TTC3-213ENST00000469939 PIN1P1O15428 100 aa1.16□□□□□ -2.22
TTC3-213ENST00000469939 TRBV6-1A0A0K0K1D8 114 aa1.15□□□□□ -2.23
TTC3-213ENST00000469939 MGPP08493 103 aa1.15□□□□□ -2.23
TTC3-213ENST00000469939 LINC00472Q9H8W2 130 aa1.15□□□□□ -2.23
TTC3-213ENST00000469939 H0Y9P7 68 aa1.14□□□□□ -2.23
TTC3-213ENST00000469939 H0YGX0 51 aa1.14□□□□□ -2.23
TTC3-213ENST00000469939 COX17Q14061 63 aa1.14□□□□□ -2.23
TTC3-213ENST00000469939 ENHOQ6UWT2 76 aa1.14□□□□□ -2.23
TTC3-213ENST00000469939 SPRR4Q96PI1 79 aa1.14□□□□□ -2.23
TTC3-213ENST00000469939 TRAV21A0A0B4J279 112 aa1.13□□□□□ -2.23
TTC3-213ENST00000469939 I3L3M4 83 aa1.13□□□□□ -2.23
TTC3-213ENST00000469939 M0R1W7 72 aa1.13□□□□□ -2.23
TTC3-213ENST00000469939 M0R3E3 92 aa1.13□□□□□ -2.23
TTC3-213ENST00000469939 SPATA8Q6RVD6 105 aa1.13□□□□□ -2.23
TTC3-213ENST00000469939 CNFNQ9BYD5 112 aa1.13□□□□□ -2.23
TTC3-213ENST00000469939 C10orf95Q9H7T3 257 aa1.13□□□□□ -2.23
TTC3-213ENST00000469939 CACNA1CQ13936 2221 aa1.13□□□□□ -2.23
TTC3-213ENST00000469939 RPL38P63173 70 aaKnown RBP1.12□□□□□ -2.23
TTC3-213ENST00000469939 PRB3Q04118 309 aaPredicted RBP1.12□□□□□ -2.23
TTC3-213ENST00000469939 KCNQ1DNQ9H478 68 aa1.12□□□□□ -2.23
TTC3-213ENST00000469939 SPINK4O60575 86 aa1.11□□□□□ -2.23
TTC3-213ENST00000469939 WFDC9Q8NEX5 89 aa1.11□□□□□ -2.23
TTC3-213ENST00000469939 TENM1Q9UKZ4 2725 aa1.1□□□□□ -2.23
TTC3-213ENST00000469939 ETDCA0A1B0GVM5 59 aa1.1□□□□□ -2.23
TTC3-213ENST00000469939 NDUFA4O00483 81 aa1.1□□□□□ -2.23
TTC3-213ENST00000469939 MRPL33O75394 65 aaKnown RBP1.1□□□□□ -2.23
TTC3-213ENST00000469939 NDUFA3O95167 84 aa1.1□□□□□ -2.23
TTC3-213ENST00000469939 FDCSPQ8NFU4 85 aa1.1□□□□□ -2.23
TTC3-213ENST00000469939 GAFA1Q96PS6 74 aa1.1□□□□□ -2.23
TTC3-213ENST00000469939 SMIM2Q9BVW6 85 aa1.1□□□□□ -2.23
TTC3-213ENST00000469939 DNAJC13O75165 2243 aa1.09□□□□□ -2.23
TTC3-213ENST00000469939 DEFB112Q30KQ8 113 aa1.09□□□□□ -2.23
TTC3-213ENST00000469939 LINC01590Q5TEZ4 76 aa1.09□□□□□ -2.23
TTC3-213ENST00000469939 TIMM8BQ9Y5J9 83 aaPredicted RBP1.09□□□□□ -2.23
TTC3-213ENST00000469939 CACNA1HO95180 2353 aa1.08□□□□□ -2.24
TTC3-213ENST00000469939 DEFB131BA0A096LNP1 70 aa1.08□□□□□ -2.24
TTC3-213ENST00000469939 CPSF4LA6NMK7 179 aaKnown RBP1.08□□□□□ -2.24
TTC3-213ENST00000469939 COX7BP24311 80 aa1.08□□□□□ -2.24
TTC3-213ENST00000469939 SPINK7P58062 85 aa1.08□□□□□ -2.24
TTC3-213ENST00000469939 TFF3Q07654 80 aa1.08□□□□□ -2.24
TTC3-213ENST00000469939 RPS27LQ71UM5 84 aaKnown RBP1.08□□□□□ -2.24
TTC3-213ENST00000469939 UBE2DNLQ8IWF7 75 aa1.08□□□□□ -2.24
TTC3-213ENST00000469939 ARHGAP5-AS1Q96IT6 56 aa1.08□□□□□ -2.24
TTC3-213ENST00000469939 TNCP24821 2201 aa1.07□□□□□ -2.24
TTC3-213ENST00000469939 AHCTF1Q8WYP5 2266 aa1.07□□□□□ -2.24
TTC3-213ENST00000469939 NDUFA1O15239 70 aa1.07□□□□□ -2.24
TTC3-213ENST00000469939 IAPPP10997 89 aa1.07□□□□□ -2.24
TTC3-213ENST00000469939 HAMPP81172 84 aa1.07□□□□□ -2.24
TTC3-213ENST00000469939 ZFHX3Q15911 3703 aa1.07□□□□□ -2.24
TTC3-213ENST00000469939 GOLGA4Q13439 2230 aaKnown RBP1.07□□□□□ -2.24
TTC3-213ENST00000469939 A0A1B0GU69 56 aa1.06□□□□□ -2.24
TTC3-213ENST00000469939 LINC00959A0A1B0GUT2 108 aa1.06□□□□□ -2.24
TTC3-213ENST00000469939 LINC00308Q8TCZ7 52 aa1.06□□□□□ -2.24
TTC3-213ENST00000469939 FAM208BQ5VWN6 2430 aa1.06□□□□□ -2.24
TTC3-213ENST00000469939 SSBP3-AS1Q7Z2R9 100 aa1.05□□□□□ -2.24
TTC3-213ENST00000469939 LOC730098B7Z3J9 87 aa1.04□□□□□ -2.24
TTC3-213ENST00000469939 CEP350Q5VT06 3117 aa1.04□□□□□ -2.24
TTC3-213ENST00000469939 LINC00158P58513 81 aa1.03□□□□□ -2.24
TTC3-213ENST00000469939 TTTY10Q9BZA0 68 aa1.03□□□□□ -2.24
TTC3-213ENST00000469939 LYNX1G3V0Z9 82 aa1.02□□□□□ -2.25
TTC3-213ENST00000469939 POLR2KP53803 58 aaKnown RBP1.02□□□□□ -2.25
TTC3-213ENST00000469939 Q8IZM0 81 aa1.02□□□□□ -2.25
TTC3-213ENST00000469939 SPTY2D1-AS1A0A0U1RR47 76 aa1.01□□□□□ -2.25
TTC3-213ENST00000469939 PRCDQ00LT1 54 aa1.01□□□□□ -2.25
TTC3-213ENST00000469939 COX6B2Q6YFQ2 88 aa1.01□□□□□ -2.25
TTC3-213ENST00000469939 TP53AIP1Q9HCN2 124 aa1.01□□□□□ -2.25
TTC3-213ENST00000469939 BPTFQ12830 3046 aa1□□□□□ -2.25
TTC3-213ENST00000469939 CRIP1P50238 77 aa1□□□□□ -2.25
TTC3-213ENST00000469939 TTC28Q96AY4 2481 aa0.99□□□□□ -2.25
TTC3-213ENST00000469939 CDKN2A-AS1Q9UH64 79 aa0.99□□□□□ -2.25
TTC3-213ENST00000469939 USP24Q9UPU5 2620 aa0.99□□□□□ -2.25
TTC3-213ENST00000469939 IGLV5-48A0A075B6I7 105 aa0.98□□□□□ -2.25
TTC3-213ENST00000469939 K7EQZ3 153 aa0.98□□□□□ -2.25
TTC3-213ENST00000469939 ZNF469Q96JG9 3925 aaPredicted RBP0.98□□□□□ -2.25
TTC3-213ENST00000469939 MEGF8Q7Z7M0 2845 aa0.97□□□□□ -2.25
TTC3-213ENST00000469939 CCL22O00626 93 aa0.97□□□□□ -2.25
TTC3-213ENST00000469939 RPL39P62891 51 aaKnown RBP0.97□□□□□ -2.25
TTC3-213ENST00000469939 COX6A2Q02221 97 aa0.97□□□□□ -2.25
TTC3-213ENST00000469939 PIGYQ3MUY2 71 aa0.97□□□□□ -2.25
TTC3-213ENST00000469939 F8P00451 2351 aa0.97□□□□□ -2.25
TTC3-213ENST00000469939 CHD8Q9HCK8 2581 aa0.96□□□□□ -2.26
TTC3-213ENST00000469939 H3BSH0 61 aa0.96□□□□□ -2.26
TTC3-213ENST00000469939 KRTAP19-3Q7Z4W3 81 aa0.96□□□□□ -2.26
TTC3-213ENST00000469939 USMG5Q96IX5 58 aa0.96□□□□□ -2.26
TTC3-213ENST00000469939 C6orf48Q9UBA6 75 aa0.96□□□□□ -2.26
TTC3-213ENST00000469939 PLCE1Q9P212 2302 aa0.96□□□□□ -2.26
TTC3-213ENST00000469939 ANKRD17O75179 2603 aaKnown RBP0.96□□□□□ -2.26
TTC3-213ENST00000469939 FRAS1Q86XX4 4008 aa0.95□□□□□ -2.26
TTC3-213ENST00000469939 FBN2P35556 2912 aa0.95□□□□□ -2.26
TTC3-213ENST00000469939 I3L2K1 104 aa0.95□□□□□ -2.26
TTC3-213ENST00000469939 RPS27P42677 84 aaKnown RBP0.95□□□□□ -2.26
TTC3-213ENST00000469939 DEFB131AP59861 70 aa0.95□□□□□ -2.26
TTC3-213ENST00000469939 MINOS1Q5TGZ0 78 aa0.95□□□□□ -2.26
TTC3-213ENST00000469939 DEFB106AQ8N104 65 aa0.95□□□□□ -2.26
TTC3-213ENST00000469939 RPL39LQ96EH5 51 aaKnown RBP0.95□□□□□ -2.26
TTC3-213ENST00000469939 PRO3102Q9H379 93 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms