RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 TNP2Q05952 138 aa11.77□□□□□ -0.52
ATPAF2-202ENST00000462733 FAT2Q9NYQ8 4349 aa11.77□□□□□ -0.53
ATPAF2-202ENST00000462733 LRCOL1A6NCL2 159 aa11.77□□□□□ -0.53
ATPAF2-202ENST00000462733 HIGD2BQ4VC39 106 aa11.77□□□□□ -0.53
ATPAF2-202ENST00000462733 C15orf56Q8N910 161 aa11.77□□□□□ -0.53
ATPAF2-202ENST00000462733 C6orf48Q9UBA6 75 aa11.77□□□□□ -0.53
ATPAF2-202ENST00000462733 CCDC179H3BU77 68 aa11.76□□□□□ -0.53
ATPAF2-202ENST00000462733 A0A087WTM6 91 aa11.75□□□□□ -0.53
ATPAF2-202ENST00000462733 LINC00846Q9NV44 126 aa11.75□□□□□ -0.53
ATPAF2-202ENST00000462733 hADV29S1A0JD25 119 aa11.74□□□□□ -0.53
ATPAF2-202ENST00000462733 LINC00526Q96FQ7 95 aa11.74□□□□□ -0.53
ATPAF2-202ENST00000462733 C2orf48Q96LS8 159 aa11.74□□□□□ -0.53
ATPAF2-202ENST00000462733 ZNF561-AS1K7EIQ3 104 aa11.74□□□□□ -0.53
ATPAF2-202ENST00000462733 HIST1H4AP62805 103 aaKnown RBP11.74□□□□□ -0.53
ATPAF2-202ENST00000462733 ATP5EP2Q5VTU8 51 aa11.74□□□□□ -0.53
ATPAF2-202ENST00000462733 TRBV7-6A0A0J9YX20 115 aa11.73□□□□□ -0.53
ATPAF2-202ENST00000462733 RPL18AQ02543 176 aaKnown RBP11.73□□□□□ -0.53
ATPAF2-202ENST00000462733 SS18L2Q9UHA2 77 aa11.72□□□□□ -0.53
ATPAF2-202ENST00000462733 CAMK2N2Q96S95 79 aa11.72□□□□□ -0.53
ATPAF2-202ENST00000462733 TRAV23DV6A0A075B6W5 121 aa11.71□□□□□ -0.54
ATPAF2-202ENST00000462733 C14orf177Q52M58 125 aa11.71□□□□□ -0.54
ATPAF2-202ENST00000462733 DIRC1Q969H9 104 aa11.71□□□□□ -0.54
ATPAF2-202ENST00000462733 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.7□□□□□ -0.54
ATPAF2-202ENST00000462733 GHRHP01286 108 aa11.7□□□□□ -0.54
ATPAF2-202ENST00000462733 DNAH11Q96DT5 4516 aa11.7□□□□□ -0.54
ATPAF2-202ENST00000462733 LOC110117498A0A087WWA1 95 aa11.69□□□□□ -0.54
ATPAF2-202ENST00000462733 ATOX1O00244 68 aa11.69□□□□□ -0.54
ATPAF2-202ENST00000462733 LINC00336Q6ZUF6 198 aa11.69□□□□□ -0.54
ATPAF2-202ENST00000462733 TRBV10-3A0A0K0K1G6 114 aa11.69□□□□□ -0.54
ATPAF2-202ENST00000462733 VPREB1P12018 145 aa11.67□□□□□ -0.54
ATPAF2-202ENST00000462733 NDUFC2-KCTD14E9PQ53 114 aa11.66□□□□□ -0.54
ATPAF2-202ENST00000462733 M0R378 163 aa11.66□□□□□ -0.54
ATPAF2-202ENST00000462733 PDE6GP18545 87 aa11.66□□□□□ -0.54
ATPAF2-202ENST00000462733 FUSP35637 526 aaKnown RBP eCLIP11.66□□□□□ -0.54
ATPAF2-202ENST00000462733 UQCRQO14949 82 aa11.66□□□□□ -0.54
ATPAF2-202ENST00000462733 ZNF73O43830 326 aaPredicted RBP11.66□□□□□ -0.54
ATPAF2-202ENST00000462733 RBM3P98179 157 aaKnown RBP11.66□□□□□ -0.54
ATPAF2-202ENST00000462733 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.66□□□□□ -0.54
ATPAF2-202ENST00000462733 XAGE1AQ9HD64 81 aa11.66□□□□□ -0.54
ATPAF2-202ENST00000462733 COX7BP24311 80 aa11.65□□□□□ -0.54
ATPAF2-202ENST00000462733 PKD1P98161 4303 aa11.64□□□□□ -0.55
ATPAF2-202ENST00000462733 ELOF1P60002 83 aaKnown RBP11.64□□□□□ -0.55
ATPAF2-202ENST00000462733 Q6ZRU5 148 aa11.64□□□□□ -0.55
ATPAF2-202ENST00000462733 C3orf22Q8N5N4 141 aa11.64□□□□□ -0.55
ATPAF2-202ENST00000462733 HECTD4Q9Y4D8 3996 aa11.64□□□□□ -0.55
ATPAF2-202ENST00000462733 Q6ZQT0 140 aa11.63□□□□□ -0.55
ATPAF2-202ENST00000462733 IGKV3D-7A0A0C4DH55 119 aa11.63□□□□□ -0.55
ATPAF2-202ENST00000462733 SYCNQ0VAF6 134 aa11.63□□□□□ -0.55
ATPAF2-202ENST00000462733 Q6ZQY7 126 aa11.63□□□□□ -0.55
ATPAF2-202ENST00000462733 UBL5Q9BZL1 73 aa11.62□□□□□ -0.55
ATPAF2-202ENST00000462733 KRTAP10-2P60368 255 aa11.61□□□□□ -0.55
ATPAF2-202ENST00000462733 LAMTOR3Q9UHA4 124 aa11.61□□□□□ -0.55
ATPAF2-202ENST00000462733 COX7CP15954 63 aa11.6□□□□□ -0.55
ATPAF2-202ENST00000462733 DNAH5Q8TE73 4624 aa11.6□□□□□ -0.55
ATPAF2-202ENST00000462733 CNBPP62633 177 aaKnown RBP11.6□□□□□ -0.55
ATPAF2-202ENST00000462733 IGLV5-52A0A0A0MRZ9 124 aa11.59□□□□□ -0.55
ATPAF2-202ENST00000462733 DSCR8Q96T75 97 aa11.59□□□□□ -0.55
ATPAF2-202ENST00000462733 C9orf153Q5TBE3 101 aa11.58□□□□□ -0.56
ATPAF2-202ENST00000462733 A0A1B0GVY2 172 aa11.56□□□□□ -0.56
ATPAF2-202ENST00000462733 LINC00528Q8N1L1 170 aa11.55□□□□□ -0.56
ATPAF2-202ENST00000462733 TLX1NBP0CAT3 122 aa11.55□□□□□ -0.56
ATPAF2-202ENST00000462733 PKHD1P08F94 4074 aa11.54□□□□□ -0.56
ATPAF2-202ENST00000462733 SERP2Q8N6R1 65 aa11.54□□□□□ -0.56
ATPAF2-202ENST00000462733 C9orf163Q8N9P6 203 aa11.54□□□□□ -0.56
ATPAF2-202ENST00000462733 CRYGAP11844 174 aa11.53□□□□□ -0.56
ATPAF2-202ENST00000462733 Q6ZRP5 223 aa11.53□□□□□ -0.56
ATPAF2-202ENST00000462733 PLA2G2DQ9UNK4 145 aa11.53□□□□□ -0.56
ATPAF2-202ENST00000462733 TRBV7-4A0A0J9YYF1 115 aa11.52□□□□□ -0.56
ATPAF2-202ENST00000462733 A0A087WVE0 104 aa11.5□□□□□ -0.57
ATPAF2-202ENST00000462733 KCNQ1DNQ9H478 68 aa11.5□□□□□ -0.57
ATPAF2-202ENST00000462733 NKAPP1Q8N9T2 125 aa11.49□□□□□ -0.57
ATPAF2-202ENST00000462733 BCE1O60756 84 aa11.49□□□□□ -0.57
ATPAF2-202ENST00000462733 SMIM20Q8N5G0 67 aa11.49□□□□□ -0.57
ATPAF2-202ENST00000462733 IGLV5-37A0A075B6J1 123 aa11.48□□□□□ -0.57
ATPAF2-202ENST00000462733 LOC107984640A0A0U1RRK4 108 aa11.48□□□□□ -0.57
ATPAF2-202ENST00000462733 CXCL6P80162 114 aa11.47□□□□□ -0.57
ATPAF2-202ENST00000462733 Q6ZVQ6 151 aa11.47□□□□□ -0.57
ATPAF2-202ENST00000462733 C16orf90A8MZG2 172 aa11.46□□□□□ -0.57
ATPAF2-202ENST00000462733 DYNC1H1Q14204 4646 aaKnown RBP11.45□□□□□ -0.58
ATPAF2-202ENST00000462733 LRP1BQ9NZR2 4599 aa11.45□□□□□ -0.58
ATPAF2-202ENST00000462733 IGKV2-24A0A0C4DH68 120 aa11.45□□□□□ -0.58
ATPAF2-202ENST00000462733 LINC01547P58512 204 aaPredicted RBP11.45□□□□□ -0.58
ATPAF2-202ENST00000462733 A0A096LNI7 61 aa11.44□□□□□ -0.58
ATPAF2-202ENST00000462733 CHTF8P0CG12 524 aa11.44□□□□□ -0.58
ATPAF2-202ENST00000462733 KRTAP10-1P60331 282 aa11.44□□□□□ -0.58
ATPAF2-202ENST00000462733 C7orf33Q8WU49 177 aa11.44□□□□□ -0.58
ATPAF2-202ENST00000462733 FAM19A1Q7Z5A9 133 aa11.43□□□□□ -0.58
ATPAF2-202ENST00000462733 DNAH8Q96JB1 4490 aa11.43□□□□□ -0.58
ATPAF2-202ENST00000462733 PRYO14603 147 aa11.43□□□□□ -0.58
ATPAF2-202ENST00000462733 PKIGQ9Y2B9 76 aa11.43□□□□□ -0.58
ATPAF2-202ENST00000462733 SERTAD4-AS1Q5TG53 156 aa11.41□□□□□ -0.58
ATPAF2-202ENST00000462733 DHRS4-AS1Q9P1J3 65 aa11.41□□□□□ -0.58
ATPAF2-202ENST00000462733 PANO1I0J062 215 aa11.4□□□□□ -0.58
ATPAF2-202ENST00000462733 RPS28P62857 69 aaKnown RBP11.4□□□□□ -0.58
ATPAF2-202ENST00000462733 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.4□□□□□ -0.58
ATPAF2-202ENST00000462733 DPH3Q96FX2 82 aa11.39□□□□□ -0.59
ATPAF2-202ENST00000462733 TMEM258P61165 79 aa11.38□□□□□ -0.59
ATPAF2-202ENST00000462733 HAMPP81172 84 aa11.38□□□□□ -0.59
ATPAF2-202ENST00000462733 FAM30AQ9NZY2 134 aa11.38□□□□□ -0.59
ATPAF2-202ENST00000462733 EPPK1P58107 5090 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms