RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 HIST1H2BNQ99877 126 aa10.8□□□□□ -0.68
VARS-220ENST00000461874 HIST1H2BMQ99879 126 aa10.8□□□□□ -0.68
VARS-220ENST00000461874 A0A0U1RQV1 116 aa10.78□□□□□ -0.68
VARS-220ENST00000461874 NPC2P61916 151 aa10.78□□□□□ -0.68
VARS-220ENST00000461874 TRAV23DV6A0A075B6W5 121 aa10.77□□□□□ -0.69
VARS-220ENST00000461874 SPINK1P00995 79 aa10.77□□□□□ -0.69
VARS-220ENST00000461874 FP248Q71RG6 208 aaPredicted RBP10.77□□□□□ -0.69
VARS-220ENST00000461874 MUC17Q685J3 4493 aa10.76□□□□□ -0.69
VARS-220ENST00000461874 LINC01545Q5VT33 79 aa10.75□□□□□ -0.69
VARS-220ENST00000461874 IGLV9-49A0A0B4J1Y8 123 aa10.74□□□□□ -0.69
VARS-220ENST00000461874 ZNF73O43830 326 aaPredicted RBP10.74□□□□□ -0.69
VARS-220ENST00000461874 MOBPQ13875 183 aa10.74□□□□□ -0.69
VARS-220ENST00000461874 JOSD1Q15040 202 aaPredicted RBP10.74□□□□□ -0.69
VARS-220ENST00000461874 PET117Q6UWS5 81 aa10.74□□□□□ -0.69
VARS-220ENST00000461874 SSBP3-AS1Q7Z2R9 100 aa10.74□□□□□ -0.69
VARS-220ENST00000461874 LITAFQ99732 161 aa10.74□□□□□ -0.69
VARS-220ENST00000461874 TIMM17BO60830 172 aa10.72□□□□□ -0.69
VARS-220ENST00000461874 LINC00308Q8TCZ7 52 aa10.72□□□□□ -0.69
VARS-220ENST00000461874 SPANXCQ9NY87 97 aa10.71□□□□□ -0.69
VARS-220ENST00000461874 CBY1Q9Y3M2 126 aa10.7□□□□□ -0.7
VARS-220ENST00000461874 RPS29P62273 56 aaKnown RBP10.69□□□□□ -0.7
VARS-220ENST00000461874 FAT4Q6V0I7 4981 aa10.69□□□□□ -0.7
VARS-220ENST00000461874 ZNF815PA8K554 130 aa10.68□□□□□ -0.7
VARS-220ENST00000461874 C3orf79P0CE67 100 aa10.68□□□□□ -0.7
VARS-220ENST00000461874 KRTAP13-3Q3SY46 172 aa10.68□□□□□ -0.7
VARS-220ENST00000461874 C5orf52A6NGY3 159 aa10.67□□□□□ -0.7
VARS-220ENST00000461874 HINT1P49773 126 aaPredicted RBP10.67□□□□□ -0.7
VARS-220ENST00000461874 ST20-AS1Q8NBB2 130 aa10.67□□□□□ -0.7
VARS-220ENST00000461874 TTTY13Q9BZ97 58 aa10.67□□□□□ -0.7
VARS-220ENST00000461874 COA6Q5JTJ3 125 aaKnown RBP10.66□□□□□ -0.7
VARS-220ENST00000461874 OR13C6PQ8NH95 151 aa10.66□□□□□ -0.7
VARS-220ENST00000461874 Q8N377 158 aa10.65□□□□□ -0.7
VARS-220ENST00000461874 C9orf153Q5TBE3 101 aa10.64□□□□□ -0.71
VARS-220ENST00000461874 SPANXDQ9BXN6 97 aa10.64□□□□□ -0.71
VARS-220ENST00000461874 SLC25A20O43772 301 aa10.62□□□□□ -0.71
VARS-220ENST00000461874 KRTDAPP60985 99 aa10.62□□□□□ -0.71
VARS-220ENST00000461874 LCE2AQ5TA79 106 aaPredicted RBP10.61□□□□□ -0.71
VARS-220ENST00000461874 LINC00518Q8N0U6 118 aa10.61□□□□□ -0.71
VARS-220ENST00000461874 DHRS4-AS1Q9P1J3 65 aa10.61□□□□□ -0.71
VARS-220ENST00000461874 SPRR1BP22528 89 aa10.6□□□□□ -0.71
VARS-220ENST00000461874 C20orf202A1L168 122 aa10.57□□□□□ -0.72
VARS-220ENST00000461874 COX7BP24311 80 aa10.57□□□□□ -0.72
VARS-220ENST00000461874 ELOF1P60002 83 aaKnown RBP10.57□□□□□ -0.72
VARS-220ENST00000461874 ASB16-AS1Q495Z4 193 aa10.57□□□□□ -0.72
VARS-220ENST00000461874 ANKRD39Q53RE8 183 aa10.57□□□□□ -0.72
VARS-220ENST00000461874 SCGB1D4Q6XE38 83 aa10.57□□□□□ -0.72
VARS-220ENST00000461874 C6orf99Q4VX62 202 aa10.56□□□□□ -0.72
VARS-220ENST00000461874 SLC25A34Q6PIV7 304 aa10.56□□□□□ -0.72
VARS-220ENST00000461874 IFITM1P13164 125 aa10.53□□□□□ -0.72
VARS-220ENST00000461874 ATOH7Q8N100 152 aa10.53□□□□□ -0.72
VARS-220ENST00000461874 COPS9Q8WXC6 57 aa10.53□□□□□ -0.72
VARS-220ENST00000461874 LAMTOR3Q9UHA4 124 aa10.53□□□□□ -0.72
VARS-220ENST00000461874 TRBV7-6A0A0J9YX20 115 aa10.51□□□□□ -0.73
VARS-220ENST00000461874 SEC61BP60468 96 aaKnown RBP10.51□□□□□ -0.73
VARS-220ENST00000461874 Q6ZVH6 145 aa10.51□□□□□ -0.73
VARS-220ENST00000461874 AKR1D1P51857 326 aa10.5□□□□□ -0.73
VARS-220ENST00000461874 PCP2Q8IVA1 136 aa10.5□□□□□ -0.73
VARS-220ENST00000461874 TAL2Q16559 108 aa10.49□□□□□ -0.73
VARS-220ENST00000461874 MUSTN1Q8IVN3 82 aa10.49□□□□□ -0.73
VARS-220ENST00000461874 A6NDN8 102 aa10.48□□□□□ -0.73
VARS-220ENST00000461874 XP32Q5T750 250 aa10.48□□□□□ -0.73
VARS-220ENST00000461874 HRCT1Q6UXD1 115 aa10.48□□□□□ -0.73
VARS-220ENST00000461874 DEFB105AQ8NG35 78 aa10.48□□□□□ -0.73
VARS-220ENST00000461874 TEX49A0A1B0GTD5 131 aa10.47□□□□□ -0.73
VARS-220ENST00000461874 A0A1B0GWB2 263 aa10.47□□□□□ -0.73
VARS-220ENST00000461874 LIMD2Q9BT23 127 aa10.47□□□□□ -0.73
VARS-220ENST00000461874 KRTAP4-1Q9BYQ7 146 aa10.47□□□□□ -0.73
VARS-220ENST00000461874 Q1RN00 199 aa10.46□□□□□ -0.73
VARS-220ENST00000461874 SNRPEP62304 92 aaKnown RBP10.45□□□□□ -0.74
VARS-220ENST00000461874 LINC01547P58512 204 aaPredicted RBP10.43□□□□□ -0.74
VARS-220ENST00000461874 CD164Q04900 197 aa10.43□□□□□ -0.74
VARS-220ENST00000461874 SMIM29Q86T20 159 aa10.43□□□□□ -0.74
VARS-220ENST00000461874 PRO1933Q9H354 126 aa10.43□□□□□ -0.74
VARS-220ENST00000461874 IGLV5-48A0A075B6I7 105 aa10.42□□□□□ -0.74
VARS-220ENST00000461874 TRAV13-2A0A0B4J235 113 aa10.42□□□□□ -0.74
VARS-220ENST00000461874 KRTAP9-2Q9BYQ4 174 aa10.42□□□□□ -0.74
VARS-220ENST00000461874 A4D1N5 150 aa10.41□□□□□ -0.74
VARS-220ENST00000461874 HIST3H2BBQ8N257 126 aa10.4□□□□□ -0.74
VARS-220ENST00000461874 SMIM11BQ8TCY0 68 aa10.39□□□□□ -0.75
VARS-220ENST00000461874 HIST1H2BLQ99880 126 aa10.39□□□□□ -0.75
VARS-220ENST00000461874 H7C2G1 150 aa10.38□□□□□ -0.75
VARS-220ENST00000461874 NHP2Q9NX24 153 aaKnown RBP10.37□□□□□ -0.75
VARS-220ENST00000461874 S100A2P29034 98 aa10.36□□□□□ -0.75
VARS-220ENST00000461874 Q5XG85 94 aa10.36□□□□□ -0.75
VARS-220ENST00000461874 A0A0G2JQZ4 141 aa10.34□□□□□ -0.75
VARS-220ENST00000461874 HSBP1L1C9JCN9 74 aa10.34□□□□□ -0.75
VARS-220ENST00000461874 C9orf92A6NGG3 77 aa10.33□□□□□ -0.76
VARS-220ENST00000461874 VAMP3Q15836 100 aa10.31□□□□□ -0.76
VARS-220ENST00000461874 C1orf195Q5TG92 126 aa10.3□□□□□ -0.76
VARS-220ENST00000461874 LINC00575Q6W349 94 aa10.29□□□□□ -0.76
VARS-220ENST00000461874 S100A6P06703 90 aa10.28□□□□□ -0.76
VARS-220ENST00000461874 S100A1P23297 94 aa10.28□□□□□ -0.76
VARS-220ENST00000461874 PCOTHQ58A44 107 aa10.28□□□□□ -0.76
VARS-220ENST00000461874 hADV29S1A0JD25 119 aa10.25□□□□□ -0.77
VARS-220ENST00000461874 F8WEM9 126 aa10.24□□□□□ -0.77
VARS-220ENST00000461874 Q6ZQY7 126 aa10.24□□□□□ -0.77
VARS-220ENST00000461874 IGLV8-61A0A075B6I0 122 aa10.23□□□□□ -0.77
VARS-220ENST00000461874 LCE2CQ5TA81 110 aa10.23□□□□□ -0.77
VARS-220ENST00000461874 SCGB1D1O95968 90 aa10.22□□□□□ -0.77
VARS-220ENST00000461874 TCL1BO95988 128 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms