RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 LINC00483Q53H64 154 aa8.82□□□□□ -1
NUP50-213ENST00000461437 C4orf48Q5BLP8 95 aa8.82□□□□□ -1
NUP50-213ENST00000461437 TTTY13Q9BZ97 58 aa8.82□□□□□ -1
NUP50-213ENST00000461437 FAT4Q6V0I7 4981 aa8.81□□□□□ -1
NUP50-213ENST00000461437 TRAV23DV6A0A075B6W5 121 aa8.81□□□□□ -1
NUP50-213ENST00000461437 A0A0U1RQV1 116 aa8.81□□□□□ -1
NUP50-213ENST00000461437 TPRXLQ17RH7 258 aa8.81□□□□□ -1
NUP50-213ENST00000461437 Q6ZRX8 168 aa8.81□□□□□ -1
NUP50-213ENST00000461437 NDUFC2O95298 119 aa8.8□□□□□ -1
NUP50-213ENST00000461437 SPAG11AQ6PDA7 123 aa8.8□□□□□ -1
NUP50-213ENST00000461437 LITAFQ99732 161 aa8.8□□□□□ -1
NUP50-213ENST00000461437 ST20-AS1Q8NBB2 130 aa8.79□□□□□ -1
NUP50-213ENST00000461437 LINC01545Q5VT33 79 aa8.78□□□□□ -1
NUP50-213ENST00000461437 LINC00308Q8TCZ7 52 aa8.77□□□□□ -1.01
NUP50-213ENST00000461437 ZNF73O43830 326 aaPredicted RBP8.76□□□□□ -1.01
NUP50-213ENST00000461437 C3orf79P0CE67 100 aa8.76□□□□□ -1.01
NUP50-213ENST00000461437 CTAG1AP78358 180 aa8.76□□□□□ -1.01
NUP50-213ENST00000461437 ZNF815PA8K554 130 aa8.75□□□□□ -1.01
NUP50-213ENST00000461437 PET117Q6UWS5 81 aa8.75□□□□□ -1.01
NUP50-213ENST00000461437 OR13C6PQ8NH95 151 aa8.75□□□□□ -1.01
NUP50-213ENST00000461437 KRTDAPP60985 99 aa8.74□□□□□ -1.01
NUP50-213ENST00000461437 C9orf153Q5TBE3 101 aa8.74□□□□□ -1.01
NUP50-213ENST00000461437 KRTAP9-6A0A140TA67 174 aa8.73□□□□□ -1.01
NUP50-213ENST00000461437 SPINK1P00995 79 aa8.73□□□□□ -1.01
NUP50-213ENST00000461437 KRTAP13-3Q3SY46 172 aa8.72□□□□□ -1.01
NUP50-213ENST00000461437 FP248Q71RG6 208 aaPredicted RBP8.72□□□□□ -1.01
NUP50-213ENST00000461437 SPANXCQ9NY87 97 aa8.72□□□□□ -1.01
NUP50-213ENST00000461437 TIMM17BO60830 172 aa8.71□□□□□ -1.02
NUP50-213ENST00000461437 JOSD1Q15040 202 aaPredicted RBP8.71□□□□□ -1.02
NUP50-213ENST00000461437 LCE2AQ5TA79 106 aaPredicted RBP8.71□□□□□ -1.02
NUP50-213ENST00000461437 SSBP3-AS1Q7Z2R9 100 aa8.71□□□□□ -1.02
NUP50-213ENST00000461437 ATOH7Q8N100 152 aa8.71□□□□□ -1.02
NUP50-213ENST00000461437 ANKRD39Q53RE8 183 aa8.7□□□□□ -1.02
NUP50-213ENST00000461437 Q8N377 158 aa8.7□□□□□ -1.02
NUP50-213ENST00000461437 COA6Q5JTJ3 125 aaKnown RBP8.67□□□□□ -1.02
NUP50-213ENST00000461437 HINT1P49773 126 aaPredicted RBP8.66□□□□□ -1.02
NUP50-213ENST00000461437 C6orf99Q4VX62 202 aa8.66□□□□□ -1.02
NUP50-213ENST00000461437 HRCT1Q6UXD1 115 aa8.66□□□□□ -1.02
NUP50-213ENST00000461437 SPANXDQ9BXN6 97 aa8.66□□□□□ -1.02
NUP50-213ENST00000461437 COX7BP24311 80 aa8.64□□□□□ -1.03
NUP50-213ENST00000461437 SCGB1D4Q6XE38 83 aa8.64□□□□□ -1.03
NUP50-213ENST00000461437 PCP2Q8IVA1 136 aa8.64□□□□□ -1.03
NUP50-213ENST00000461437 KRTAP4-1Q9BYQ7 146 aa8.64□□□□□ -1.03
NUP50-213ENST00000461437 ELOF1P60002 83 aaKnown RBP8.63□□□□□ -1.03
NUP50-213ENST00000461437 RPS29P62273 56 aaKnown RBP8.63□□□□□ -1.03
NUP50-213ENST00000461437 C20orf202A1L168 122 aa8.62□□□□□ -1.03
NUP50-213ENST00000461437 SLC25A20O43772 301 aa8.62□□□□□ -1.03
NUP50-213ENST00000461437 DEFB105AQ8NG35 78 aa8.62□□□□□ -1.03
NUP50-213ENST00000461437 SPRR1BP22528 89 aa8.61□□□□□ -1.03
NUP50-213ENST00000461437 Q1RN00 199 aa8.61□□□□□ -1.03
NUP50-213ENST00000461437 DHRS4-AS1Q9P1J3 65 aa8.61□□□□□ -1.03
NUP50-213ENST00000461437 CBY1Q9Y3M2 126 aa8.61□□□□□ -1.03
NUP50-213ENST00000461437 MUSTN1Q8IVN3 82 aa8.6□□□□□ -1.03
NUP50-213ENST00000461437 LINC00518Q8N0U6 118 aa8.6□□□□□ -1.03
NUP50-213ENST00000461437 ASB16-AS1Q495Z4 193 aa8.59□□□□□ -1.03
NUP50-213ENST00000461437 A0A0G2JQZ4 141 aa8.58□□□□□ -1.04
NUP50-213ENST00000461437 A6NDN8 102 aa8.58□□□□□ -1.04
NUP50-213ENST00000461437 C5orf52A6NGY3 159 aa8.58□□□□□ -1.04
NUP50-213ENST00000461437 TAL2Q16559 108 aa8.58□□□□□ -1.04
NUP50-213ENST00000461437 LAMTOR3Q9UHA4 124 aa8.57□□□□□ -1.04
NUP50-213ENST00000461437 XP32Q5T750 250 aa8.56□□□□□ -1.04
NUP50-213ENST00000461437 H7C2G1 150 aa8.55□□□□□ -1.04
NUP50-213ENST00000461437 IFITM1P13164 125 aa8.54□□□□□ -1.04
NUP50-213ENST00000461437 AKR1D1P51857 326 aa8.54□□□□□ -1.04
NUP50-213ENST00000461437 LINC01547P58512 204 aaPredicted RBP8.54□□□□□ -1.04
NUP50-213ENST00000461437 SLC25A34Q6PIV7 304 aa8.54□□□□□ -1.04
NUP50-213ENST00000461437 SMIM29Q86T20 159 aa8.54□□□□□ -1.04
NUP50-213ENST00000461437 S100A1P23297 94 aa8.53□□□□□ -1.04
NUP50-213ENST00000461437 SEC61BP60468 96 aaKnown RBP8.53□□□□□ -1.04
NUP50-213ENST00000461437 HIST3H2BBQ8N257 126 aa8.53□□□□□ -1.04
NUP50-213ENST00000461437 TEX49A0A1B0GTD5 131 aa8.52□□□□□ -1.05
NUP50-213ENST00000461437 A0A1B0GWB2 263 aa8.52□□□□□ -1.05
NUP50-213ENST00000461437 C9orf92A6NGG3 77 aa8.52□□□□□ -1.05
NUP50-213ENST00000461437 S100A2P29034 98 aa8.52□□□□□ -1.05
NUP50-213ENST00000461437 SMIM11BQ8TCY0 68 aa8.52□□□□□ -1.05
NUP50-213ENST00000461437 COPS9Q8WXC6 57 aa8.52□□□□□ -1.05
NUP50-213ENST00000461437 HIST1H2BLQ99880 126 aa8.52□□□□□ -1.05
NUP50-213ENST00000461437 TRBV7-6A0A0J9YX20 115 aa8.5□□□□□ -1.05
NUP50-213ENST00000461437 Q6ZVH6 145 aa8.5□□□□□ -1.05
NUP50-213ENST00000461437 LIMD2Q9BT23 127 aa8.5□□□□□ -1.05
NUP50-213ENST00000461437 SNRPEP62304 92 aaKnown RBP8.49□□□□□ -1.05
NUP50-213ENST00000461437 PRO1933Q9H354 126 aa8.49□□□□□ -1.05
NUP50-213ENST00000461437 IGLV5-48A0A075B6I7 105 aa8.48□□□□□ -1.05
NUP50-213ENST00000461437 S100A6P06703 90 aa8.48□□□□□ -1.05
NUP50-213ENST00000461437 TRAV13-2A0A0B4J235 113 aa8.47□□□□□ -1.05
NUP50-213ENST00000461437 A4D1N5 150 aa8.45□□□□□ -1.06
NUP50-213ENST00000461437 HSBP1L1C9JCN9 74 aa8.45□□□□□ -1.06
NUP50-213ENST00000461437 C12orf57Q99622 126 aa8.45□□□□□ -1.06
NUP50-213ENST00000461437 PCOTHQ58A44 107 aa8.44□□□□□ -1.06
NUP50-213ENST00000461437 CD164Q04900 197 aa8.43□□□□□ -1.06
NUP50-213ENST00000461437 C1orf195Q5TG92 126 aa8.42□□□□□ -1.06
NUP50-213ENST00000461437 LINC00575Q6W349 94 aa8.4□□□□□ -1.06
NUP50-213ENST00000461437 NHP2Q9NX24 153 aaKnown RBP8.4□□□□□ -1.06
NUP50-213ENST00000461437 SCGB1D1O95968 90 aa8.39□□□□□ -1.07
NUP50-213ENST00000461437 Q6ZQY7 126 aa8.39□□□□□ -1.07
NUP50-213ENST00000461437 IGLV8-61A0A075B6I0 122 aa8.38□□□□□ -1.07
NUP50-213ENST00000461437 LCE2CQ5TA81 110 aa8.38□□□□□ -1.07
NUP50-213ENST00000461437 LCE2DQ5TA82 110 aaPredicted RBP8.37□□□□□ -1.07
NUP50-213ENST00000461437 Q5XG85 94 aa8.37□□□□□ -1.07
NUP50-213ENST00000461437 hADV29S1A0JD25 119 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms