RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 TTC28Q96AY4 2481 aa3.24□□□□□ -1.89
PCDH9-203ENST00000456367 INAFM1C9JVW0 142 aa3.23□□□□□ -1.89
PCDH9-203ENST00000456367 CRIPTQ9P021 101 aa3.23□□□□□ -1.89
PCDH9-203ENST00000456367 CACNA1AO00555 2505 aa3.23□□□□□ -1.89
PCDH9-203ENST00000456367 TLN1Q9Y490 2541 aaKnown RBP3.23□□□□□ -1.89
PCDH9-203ENST00000456367 C19orf73Q9NVV2 129 aa3.23□□□□□ -1.89
PCDH9-203ENST00000456367 CCDC168Q8NDH2 2452 aa3.22□□□□□ -1.89
PCDH9-203ENST00000456367 IGLV5-52A0A0A0MRZ9 124 aa3.22□□□□□ -1.89
PCDH9-203ENST00000456367 J3QL48 77 aa3.22□□□□□ -1.89
PCDH9-203ENST00000456367 IGLV8-61A0A075B6I0 122 aa3.22□□□□□ -1.89
PCDH9-203ENST00000456367 SEC61BP60468 96 aaKnown RBP3.22□□□□□ -1.89
PCDH9-203ENST00000456367 ZCCHC13Q8WW36 166 aaKnown RBP3.22□□□□□ -1.89
PCDH9-203ENST00000456367 FAM168BA1KXE4 195 aa3.22□□□□□ -1.89
PCDH9-203ENST00000456367 C9orf163Q8N9P6 203 aa3.21□□□□□ -1.9
PCDH9-203ENST00000456367 A0A087X002 238 aa3.21□□□□□ -1.9
PCDH9-203ENST00000456367 SPRR1AP35321 89 aa3.2□□□□□ -1.9
PCDH9-203ENST00000456367 DMDP11532 3685 aa3.2□□□□□ -1.9
PCDH9-203ENST00000456367 SONP18583 2426 aaKnown RBP3.2□□□□□ -1.9
PCDH9-203ENST00000456367 LCE6AA0A183 80 aa3.2□□□□□ -1.9
PCDH9-203ENST00000456367 CNBPP62633 177 aaKnown RBP3.2□□□□□ -1.9
PCDH9-203ENST00000456367 TNP2Q05952 138 aa3.2□□□□□ -1.9
PCDH9-203ENST00000456367 FN1P02751 2386 aaKnown RBP3.2□□□□□ -1.9
PCDH9-203ENST00000456367 DMAC1Q96GE9 116 aa3.19□□□□□ -1.9
PCDH9-203ENST00000456367 MMP24-AS1A0A0U1RRL7 71 aa3.19□□□□□ -1.9
PCDH9-203ENST00000456367 PIEZO2Q9H5I5 2752 aa3.19□□□□□ -1.9
PCDH9-203ENST00000456367 MUC6Q6W4X9 2439 aa3.19□□□□□ -1.9
PCDH9-203ENST00000456367 A6NN06 94 aa3.18□□□□□ -1.9
PCDH9-203ENST00000456367 HRES1P13985 223 aa3.18□□□□□ -1.9
PCDH9-203ENST00000456367 KRTAP10-9P60411 292 aa3.18□□□□□ -1.9
PCDH9-203ENST00000456367 ABCA2Q9BZC7 2435 aa3.18□□□□□ -1.9
PCDH9-203ENST00000456367 C1orf134Q5TEV5 83 aa3.18□□□□□ -1.9
PCDH9-203ENST00000456367 SPINK7P58062 85 aa3.18□□□□□ -1.9
PCDH9-203ENST00000456367 PRAC1Q96KF2 57 aa3.18□□□□□ -1.9
PCDH9-203ENST00000456367 CHD8Q9HCK8 2581 aa3.17□□□□□ -1.9
PCDH9-203ENST00000456367 HIVEP3Q5T1R4 2406 aa3.17□□□□□ -1.9
PCDH9-203ENST00000456367 SPRR1BP22528 89 aa3.17□□□□□ -1.9
PCDH9-203ENST00000456367 PLA2G1BP04054 148 aaKnown RBP3.17□□□□□ -1.9
PCDH9-203ENST00000456367 SPACA4Q8TDM5 124 aa3.17□□□□□ -1.9
PCDH9-203ENST00000456367 MYO18BQ8IUG5 2567 aa3.17□□□□□ -1.9
PCDH9-203ENST00000456367 ZNF861PO60384 105 aa3.17□□□□□ -1.9
PCDH9-203ENST00000456367 WDR87Q6ZQQ6 2873 aa3.17□□□□□ -1.9
PCDH9-203ENST00000456367 USP9XQ93008 2570 aaPredicted RBP3.16□□□□□ -1.9
PCDH9-203ENST00000456367 LINC00472Q9H8W2 130 aa3.16□□□□□ -1.9
PCDH9-203ENST00000456367 MYO15AQ9UKN7 3530 aa3.16□□□□□ -1.9
PCDH9-203ENST00000456367 CSAG1Q6PB30 78 aa3.16□□□□□ -1.9
PCDH9-203ENST00000456367 Q96NJ1 140 aa3.16□□□□□ -1.9
PCDH9-203ENST00000456367 Q8NDZ9 215 aa3.16□□□□□ -1.9
PCDH9-203ENST00000456367 VCANP13611 3396 aa3.15□□□□□ -1.9
PCDH9-203ENST00000456367 NBDYA0A0U1RRE5 68 aa3.15□□□□□ -1.91
PCDH9-203ENST00000456367 A0A0G2JQZ4 141 aa3.15□□□□□ -1.91
PCDH9-203ENST00000456367 A0A1W2PNN7 141 aa3.15□□□□□ -1.91
PCDH9-203ENST00000456367 TLN2Q9Y4G6 2542 aa3.14□□□□□ -1.91
PCDH9-203ENST00000456367 ZNF462Q96JM2 2506 aa3.14□□□□□ -1.91
PCDH9-203ENST00000456367 A0A1B0GU33 70 aa3.14□□□□□ -1.91
PCDH9-203ENST00000456367 CHTF8P0CG12 524 aa3.14□□□□□ -1.91
PCDH9-203ENST00000456367 Q6ZR54 194 aa3.14□□□□□ -1.91
PCDH9-203ENST00000456367 KRTAP29-1A8MX34 341 aaPredicted RBP3.14□□□□□ -1.91
PCDH9-203ENST00000456367 RTL8CO15255 209 aa3.13□□□□□ -1.91
PCDH9-203ENST00000456367 KRTAP16-1A8MUX0 517 aa3.13□□□□□ -1.91
PCDH9-203ENST00000456367 SPATA8Q6RVD6 105 aa3.13□□□□□ -1.91
PCDH9-203ENST00000456367 TYMSOSQ8TAI1 123 aa3.13□□□□□ -1.91
PCDH9-203ENST00000456367 BPTFQ12830 3046 aa3.13□□□□□ -1.91
PCDH9-203ENST00000456367 LY6G6CO95867 125 aa3.12□□□□□ -1.91
PCDH9-203ENST00000456367 USP9YO00507 2555 aaPredicted RBP3.12□□□□□ -1.91
PCDH9-203ENST00000456367 CDH23Q9H251 3354 aa3.12□□□□□ -1.91
PCDH9-203ENST00000456367 PKD1L2Q7Z442 2459 aa3.11□□□□□ -1.91
PCDH9-203ENST00000456367 LUZP6Q538Z0 58 aa3.11□□□□□ -1.91
PCDH9-203ENST00000456367 CR1P17927 2039 aa3.11□□□□□ -1.91
PCDH9-203ENST00000456367 ABCA12Q86UK0 2595 aa3.11□□□□□ -1.91
PCDH9-203ENST00000456367 CENPFP49454 3210 aa3.11□□□□□ -1.91
PCDH9-203ENST00000456367 IGF2RP11717 2491 aa3.11□□□□□ -1.91
PCDH9-203ENST00000456367 APLNQ9ULZ1 77 aa3.11□□□□□ -1.91
PCDH9-203ENST00000456367 IGLV7-43P04211 117 aa3.1□□□□□ -1.91
PCDH9-203ENST00000456367 SMR3AQ99954 134 aa3.1□□□□□ -1.91
PCDH9-203ENST00000456367 PIEZO1Q92508 2521 aa3.09□□□□□ -1.91
PCDH9-203ENST00000456367 KRTAP4-16G5E9R7 235 aaPredicted RBP3.08□□□□□ -1.92
PCDH9-203ENST00000456367 Q5W150 140 aa3.08□□□□□ -1.92
PCDH9-203ENST00000456367 PSORS1C2Q9UIG4 136 aa3.07□□□□□ -1.92
PCDH9-203ENST00000456367 SMG1Q96Q15 3661 aaKnown RBP3.07□□□□□ -1.92
PCDH9-203ENST00000456367 KRTAP26-1Q6PEX3 210 aa3.07□□□□□ -1.92
PCDH9-203ENST00000456367 Q8N1X5 172 aa3.06□□□□□ -1.92
PCDH9-203ENST00000456367 ROMO1P60602 79 aa3.06□□□□□ -1.92
PCDH9-203ENST00000456367 CASC10Q5T4H9 136 aa3.06□□□□□ -1.92
PCDH9-203ENST00000456367 LINC00304Q8N9R0 145 aa3.05□□□□□ -1.92
PCDH9-203ENST00000456367 SETD2Q9BYW2 2564 aaPredicted RBP3.05□□□□□ -1.92
PCDH9-203ENST00000456367 XIRP2A4UGR9 3374 aa3.05□□□□□ -1.92
PCDH9-203ENST00000456367 A0A087WTM6 91 aa3.05□□□□□ -1.92
PCDH9-203ENST00000456367 NOTCH2NLQ7Z3S9 236 aa3.05□□□□□ -1.92
PCDH9-203ENST00000456367 KRTAP25-1Q3LHN0 102 aa3.04□□□□□ -1.92
PCDH9-203ENST00000456367 ANKRD11Q6UB99 2663 aaPredicted RBP3.04□□□□□ -1.92
PCDH9-203ENST00000456367 LRRK2Q5S007 2527 aa3.04□□□□□ -1.92
PCDH9-203ENST00000456367 CEP350Q5VT06 3117 aa3.04□□□□□ -1.92
PCDH9-203ENST00000456367 NCOR2Q9Y618 2525 aa3.04□□□□□ -1.92
PCDH9-203ENST00000456367 ANKRD17O75179 2603 aaKnown RBP3.03□□□□□ -1.92
PCDH9-203ENST00000456367 JMJD1CQ15652 2540 aa3.03□□□□□ -1.92
PCDH9-203ENST00000456367 SZT2Q5T011 3432 aa3.03□□□□□ -1.92
PCDH9-203ENST00000456367 RPL37P61927 97 aaKnown RBP3.03□□□□□ -1.92
PCDH9-203ENST00000456367 LINC00483Q53H64 154 aa3.03□□□□□ -1.92
PCDH9-203ENST00000456367 KRTAP10-3P60369 221 aa3.02□□□□□ -1.93
PCDH9-203ENST00000456367 H1FX-AS1Q4G0G2 97 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 168.7 ms