RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 LINC01545Q5VT33 79 aa9.39□□□□□ -0.91
NCKIPSD-208ENST00000454134 CDIP1Q9H305 208 aa9.39□□□□□ -0.91
NCKIPSD-208ENST00000454134 TRAV23DV6A0A075B6W5 121 aa9.38□□□□□ -0.91
NCKIPSD-208ENST00000454134 TPRXLQ17RH7 258 aa9.38□□□□□ -0.91
NCKIPSD-208ENST00000454134 MUC2Q02817 5179 aa9.37□□□□□ -0.91
NCKIPSD-208ENST00000454134 IGLV9-49A0A0B4J1Y8 123 aa9.37□□□□□ -0.91
NCKIPSD-208ENST00000454134 MOBPQ13875 183 aa9.37□□□□□ -0.91
NCKIPSD-208ENST00000454134 LITAFQ99732 161 aa9.37□□□□□ -0.91
NCKIPSD-208ENST00000454134 PET117Q6UWS5 81 aa9.36□□□□□ -0.91
NCKIPSD-208ENST00000454134 TTTY13Q9BZ97 58 aa9.36□□□□□ -0.91
NCKIPSD-208ENST00000454134 ZNF73O43830 326 aaPredicted RBP9.35□□□□□ -0.91
NCKIPSD-208ENST00000454134 C3orf79P0CE67 100 aa9.35□□□□□ -0.91
NCKIPSD-208ENST00000454134 LINC00308Q8TCZ7 52 aa9.35□□□□□ -0.91
NCKIPSD-208ENST00000454134 ZNF815PA8K554 130 aa9.34□□□□□ -0.91
NCKIPSD-208ENST00000454134 TIMM17BO60830 172 aa9.33□□□□□ -0.92
NCKIPSD-208ENST00000454134 KRTDAPP60985 99 aa9.33□□□□□ -0.92
NCKIPSD-208ENST00000454134 JOSD1Q15040 202 aaPredicted RBP9.33□□□□□ -0.92
NCKIPSD-208ENST00000454134 SPINK1P00995 79 aa9.32□□□□□ -0.92
NCKIPSD-208ENST00000454134 ST20-AS1Q8NBB2 130 aa9.32□□□□□ -0.92
NCKIPSD-208ENST00000454134 OR13C6PQ8NH95 151 aa9.32□□□□□ -0.92
NCKIPSD-208ENST00000454134 SPANXCQ9NY87 97 aa9.32□□□□□ -0.92
NCKIPSD-208ENST00000454134 FP248Q71RG6 208 aaPredicted RBP9.31□□□□□ -0.92
NCKIPSD-208ENST00000454134 COA6Q5JTJ3 125 aaKnown RBP9.3□□□□□ -0.92
NCKIPSD-208ENST00000454134 SSBP3-AS1Q7Z2R9 100 aa9.3□□□□□ -0.92
NCKIPSD-208ENST00000454134 A0A0U1RQV1 116 aa9.28□□□□□ -0.92
NCKIPSD-208ENST00000454134 S100A1P23297 94 aa9.28□□□□□ -0.92
NCKIPSD-208ENST00000454134 HINT1P49773 126 aaPredicted RBP9.28□□□□□ -0.92
NCKIPSD-208ENST00000454134 C9orf153Q5TBE3 101 aa9.28□□□□□ -0.92
NCKIPSD-208ENST00000454134 CBY1Q9Y3M2 126 aa9.27□□□□□ -0.93
NCKIPSD-208ENST00000454134 KRTAP13-3Q3SY46 172 aa9.26□□□□□ -0.93
NCKIPSD-208ENST00000454134 ANKRD39Q53RE8 183 aa9.26□□□□□ -0.93
NCKIPSD-208ENST00000454134 ATOH7Q8N100 152 aa9.26□□□□□ -0.93
NCKIPSD-208ENST00000454134 Q8N377 158 aa9.26□□□□□ -0.93
NCKIPSD-208ENST00000454134 SPANXDQ9BXN6 97 aa9.26□□□□□ -0.93
NCKIPSD-208ENST00000454134 C20orf202A1L168 122 aa9.24□□□□□ -0.93
NCKIPSD-208ENST00000454134 SCGB1D4Q6XE38 83 aa9.24□□□□□ -0.93
NCKIPSD-208ENST00000454134 RPS29P62273 56 aaKnown RBP9.23□□□□□ -0.93
NCKIPSD-208ENST00000454134 C5orf52A6NGY3 159 aa9.22□□□□□ -0.93
NCKIPSD-208ENST00000454134 C6orf99Q4VX62 202 aa9.22□□□□□ -0.93
NCKIPSD-208ENST00000454134 LINC00518Q8N0U6 118 aa9.22□□□□□ -0.93
NCKIPSD-208ENST00000454134 DHRS4-AS1Q9P1J3 65 aa9.22□□□□□ -0.93
NCKIPSD-208ENST00000454134 MUC17Q685J3 4493 aa9.21□□□□□ -0.93
NCKIPSD-208ENST00000454134 SLC25A20O43772 301 aa9.21□□□□□ -0.94
NCKIPSD-208ENST00000454134 COX7BP24311 80 aa9.21□□□□□ -0.94
NCKIPSD-208ENST00000454134 ELOF1P60002 83 aaKnown RBP9.2□□□□□ -0.94
NCKIPSD-208ENST00000454134 PCP2Q8IVA1 136 aa9.2□□□□□ -0.94
NCKIPSD-208ENST00000454134 SPRR1BP22528 89 aa9.19□□□□□ -0.94
NCKIPSD-208ENST00000454134 HRCT1Q6UXD1 115 aa9.17□□□□□ -0.94
NCKIPSD-208ENST00000454134 MUSTN1Q8IVN3 82 aa9.17□□□□□ -0.94
NCKIPSD-208ENST00000454134 DEFB105AQ8NG35 78 aa9.17□□□□□ -0.94
NCKIPSD-208ENST00000454134 A6NDN8 102 aa9.16□□□□□ -0.94
NCKIPSD-208ENST00000454134 IFITM1P13164 125 aa9.16□□□□□ -0.94
NCKIPSD-208ENST00000454134 TAL2Q16559 108 aa9.15□□□□□ -0.94
NCKIPSD-208ENST00000454134 Q1RN00 199 aa9.15□□□□□ -0.94
NCKIPSD-208ENST00000454134 LCE2AQ5TA79 106 aaPredicted RBP9.15□□□□□ -0.94
NCKIPSD-208ENST00000454134 SLC25A34Q6PIV7 304 aa9.15□□□□□ -0.94
NCKIPSD-208ENST00000454134 COPS9Q8WXC6 57 aa9.15□□□□□ -0.94
NCKIPSD-208ENST00000454134 LAMTOR3Q9UHA4 124 aa9.15□□□□□ -0.94
NCKIPSD-208ENST00000454134 ASB16-AS1Q495Z4 193 aa9.14□□□□□ -0.95
NCKIPSD-208ENST00000454134 Q6ZVH6 145 aa9.13□□□□□ -0.95
NCKIPSD-208ENST00000454134 FAT4Q6V0I7 4981 aa9.13□□□□□ -0.95
NCKIPSD-208ENST00000454134 TRBV7-6A0A0J9YX20 115 aa9.12□□□□□ -0.95
NCKIPSD-208ENST00000454134 HIST3H2BBQ8N257 126 aa9.12□□□□□ -0.95
NCKIPSD-208ENST00000454134 A0A1B0GWB2 263 aa9.11□□□□□ -0.95
NCKIPSD-208ENST00000454134 AKR1D1P51857 326 aa9.11□□□□□ -0.95
NCKIPSD-208ENST00000454134 HIST1H2BLQ99880 126 aa9.11□□□□□ -0.95
NCKIPSD-208ENST00000454134 TEX49A0A1B0GTD5 131 aa9.1□□□□□ -0.95
NCKIPSD-208ENST00000454134 KRTAP4-1Q9BYQ7 146 aa9.1□□□□□ -0.95
NCKIPSD-208ENST00000454134 S100A2P29034 98 aa9.09□□□□□ -0.95
NCKIPSD-208ENST00000454134 SEC61BP60468 96 aaKnown RBP9.09□□□□□ -0.95
NCKIPSD-208ENST00000454134 SNRPEP62304 92 aaKnown RBP9.09□□□□□ -0.95
NCKIPSD-208ENST00000454134 LIMD2Q9BT23 127 aa9.09□□□□□ -0.95
NCKIPSD-208ENST00000454134 SMIM29Q86T20 159 aa9.08□□□□□ -0.96
NCKIPSD-208ENST00000454134 SMIM11BQ8TCY0 68 aa9.08□□□□□ -0.96
NCKIPSD-208ENST00000454134 TRAV13-2A0A0B4J235 113 aa9.07□□□□□ -0.96
NCKIPSD-208ENST00000454134 LINC01547P58512 204 aaPredicted RBP9.07□□□□□ -0.96
NCKIPSD-208ENST00000454134 XP32Q5T750 250 aa9.07□□□□□ -0.96
NCKIPSD-208ENST00000454134 PRO1933Q9H354 126 aa9.07□□□□□ -0.96
NCKIPSD-208ENST00000454134 IGLV5-48A0A075B6I7 105 aa9.06□□□□□ -0.96
NCKIPSD-208ENST00000454134 A0A0G2JQZ4 141 aa9.06□□□□□ -0.96
NCKIPSD-208ENST00000454134 H7C2G1 150 aa9.05□□□□□ -0.96
NCKIPSD-208ENST00000454134 A4D1N5 150 aa9.04□□□□□ -0.96
NCKIPSD-208ENST00000454134 HSBP1L1C9JCN9 74 aa9.04□□□□□ -0.96
NCKIPSD-208ENST00000454134 S100A6P06703 90 aa9.03□□□□□ -0.96
NCKIPSD-208ENST00000454134 CD164Q04900 197 aa9.03□□□□□ -0.96
NCKIPSD-208ENST00000454134 C9orf92A6NGG3 77 aa9.01□□□□□ -0.97
NCKIPSD-208ENST00000454134 NHP2Q9NX24 153 aaKnown RBP9.01□□□□□ -0.97
NCKIPSD-208ENST00000454134 KRTAP9-2Q9BYQ4 174 aa9□□□□□ -0.97
NCKIPSD-208ENST00000454134 VAMP3Q15836 100 aa8.98□□□□□ -0.97
NCKIPSD-208ENST00000454134 SCGB1D1O95968 90 aa8.97□□□□□ -0.97
NCKIPSD-208ENST00000454134 LINC00575Q6W349 94 aa8.97□□□□□ -0.97
NCKIPSD-208ENST00000454134 C1orf195Q5TG92 126 aa8.96□□□□□ -0.98
NCKIPSD-208ENST00000454134 C12orf57Q99622 126 aa8.96□□□□□ -0.98
NCKIPSD-208ENST00000454134 Q5XG85 94 aa8.95□□□□□ -0.98
NCKIPSD-208ENST00000454134 PCOTHQ58A44 107 aa8.94□□□□□ -0.98
NCKIPSD-208ENST00000454134 Q6ZQY7 126 aa8.94□□□□□ -0.98
NCKIPSD-208ENST00000454134 hADV29S1A0JD25 119 aa8.93□□□□□ -0.98
NCKIPSD-208ENST00000454134 HIST1H4GQ99525 98 aa8.93□□□□□ -0.98
NCKIPSD-208ENST00000454134 F8WEM9 126 aa8.92□□□□□ -0.98
NCKIPSD-208ENST00000454134 COX8AP10176 69 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms