RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 UPK3BQ9BT76 320 aa11.59□□□□□ -0.55
CLDN9-201ENST00000445369 RMI2Q96E14 147 aa11.58□□□□□ -0.56
CLDN9-201ENST00000445369 C9orf153Q5TBE3 101 aa11.56□□□□□ -0.56
CLDN9-201ENST00000445369 IGLV5-37A0A075B6J1 123 aa11.55□□□□□ -0.56
CLDN9-201ENST00000445369 FAM19A1Q7Z5A9 133 aa11.55□□□□□ -0.56
CLDN9-201ENST00000445369 Q6ZVQ6 151 aa11.54□□□□□ -0.56
CLDN9-201ENST00000445369 FAM168BA1KXE4 195 aa11.52□□□□□ -0.57
CLDN9-201ENST00000445369 MDFIQ99750 246 aa11.52□□□□□ -0.57
CLDN9-201ENST00000445369 LINC01547P58512 204 aaPredicted RBP11.51□□□□□ -0.57
CLDN9-201ENST00000445369 KRTAP7-1Q8IUC3 87 aa11.51□□□□□ -0.57
CLDN9-201ENST00000445369 SERP2Q8N6R1 65 aa11.5□□□□□ -0.57
CLDN9-201ENST00000445369 KRTAP4-16G5E9R7 235 aaPredicted RBP11.5□□□□□ -0.57
CLDN9-201ENST00000445369 PRYO14603 147 aa11.5□□□□□ -0.57
CLDN9-201ENST00000445369 CRYGAP11844 174 aa11.5□□□□□ -0.57
CLDN9-201ENST00000445369 IGLV1-50A0A075B6I6 118 aa11.49□□□□□ -0.57
CLDN9-201ENST00000445369 SPRR1AP35321 89 aa11.48□□□□□ -0.57
CLDN9-201ENST00000445369 RPL37AP8A6NKH3 93 aa11.48□□□□□ -0.57
CLDN9-201ENST00000445369 Q6ZRX8 168 aa11.48□□□□□ -0.57
CLDN9-201ENST00000445369 NBEAL1Q6ZS30 2694 aa11.48□□□□□ -0.57
CLDN9-201ENST00000445369 HAMPP81172 84 aa11.47□□□□□ -0.57
CLDN9-201ENST00000445369 CXCL6P80162 114 aa11.47□□□□□ -0.57
CLDN9-201ENST00000445369 LOC107984640A0A0U1RRK4 108 aa11.46□□□□□ -0.57
CLDN9-201ENST00000445369 Q8N377 158 aa11.46□□□□□ -0.57
CLDN9-201ENST00000445369 DHRS4-AS1Q9P1J3 65 aa11.46□□□□□ -0.57
CLDN9-201ENST00000445369 Q9BRP9 147 aa11.45□□□□□ -0.58
CLDN9-201ENST00000445369 KRTAP1-5Q9BYS1 174 aa11.44□□□□□ -0.58
CLDN9-201ENST00000445369 MRPL55Q7Z7F7 128 aaKnown RBP11.44□□□□□ -0.58
CLDN9-201ENST00000445369 FAM19A5Q7Z5A7 132 aaPredicted RBP11.43□□□□□ -0.58
CLDN9-201ENST00000445369 ETDCA0A1B0GVM5 59 aa11.42□□□□□ -0.58
CLDN9-201ENST00000445369 DEFB105AQ8NG35 78 aa11.42□□□□□ -0.58
CLDN9-201ENST00000445369 IGLV5-48A0A075B6I7 105 aa11.4□□□□□ -0.58
CLDN9-201ENST00000445369 CYSTM1Q9H1C7 97 aa11.4□□□□□ -0.58
CLDN9-201ENST00000445369 MGAM2Q2M2H8 2515 aa11.38□□□□□ -0.59
CLDN9-201ENST00000445369 DNAH9Q9NYC9 4486 aa11.38□□□□□ -0.59
CLDN9-201ENST00000445369 BCE1O60756 84 aa11.37□□□□□ -0.59
CLDN9-201ENST00000445369 APLNQ9ULZ1 77 aa11.37□□□□□ -0.59
CLDN9-201ENST00000445369 CNBPP62633 177 aaKnown RBP11.37□□□□□ -0.59
CLDN9-201ENST00000445369 SCXQ7RTU7 201 aa11.36□□□□□ -0.59
CLDN9-201ENST00000445369 TNP2Q05952 138 aa11.36□□□□□ -0.59
CLDN9-201ENST00000445369 ST20-AS1Q8NBB2 130 aa11.36□□□□□ -0.59
CLDN9-201ENST00000445369 LYSTQ99698 3801 aa11.35□□□□□ -0.59
CLDN9-201ENST00000445369 DNAH10Q8IVF4 4471 aa11.34□□□□□ -0.59
CLDN9-201ENST00000445369 A0A096LNI7 61 aa11.34□□□□□ -0.59
CLDN9-201ENST00000445369 REG3GQ6UW15 175 aa11.34□□□□□ -0.59
CLDN9-201ENST00000445369 UBE2DNLQ8IWF7 75 aa11.34□□□□□ -0.59
CLDN9-201ENST00000445369 C16orf90A8MZG2 172 aa11.34□□□□□ -0.59
CLDN9-201ENST00000445369 ERC2-IT1O76042 136 aa11.34□□□□□ -0.59
CLDN9-201ENST00000445369 SMIM20Q8N5G0 67 aa11.34□□□□□ -0.59
CLDN9-201ENST00000445369 DYNC2H1Q8NCM8 4307 aaKnown RBP11.33□□□□□ -0.6
CLDN9-201ENST00000445369 PSCAO43653 123 aa11.32□□□□□ -0.6
CLDN9-201ENST00000445369 C3orf84H3BNL1 204 aa11.31□□□□□ -0.6
CLDN9-201ENST00000445369 UBE2BP63146 152 aa11.31□□□□□ -0.6
CLDN9-201ENST00000445369 B9D2Q9BPU9 175 aa11.31□□□□□ -0.6
CLDN9-201ENST00000445369 NREPQ16612 68 aa11.31□□□□□ -0.6
CLDN9-201ENST00000445369 TRAV7A0A075B6U4 112 aa11.3□□□□□ -0.6
CLDN9-201ENST00000445369 IGKV2-24A0A0C4DH68 120 aa11.29□□□□□ -0.6
CLDN9-201ENST00000445369 KRTAP21-3Q3LHN1 58 aa11.29□□□□□ -0.6
CLDN9-201ENST00000445369 COL7A1Q02388 2944 aa11.29□□□□□ -0.6
CLDN9-201ENST00000445369 A0A1B0GW54 56 aa11.29□□□□□ -0.6
CLDN9-201ENST00000445369 A0A1W2PNM2 257 aa11.29□□□□□ -0.6
CLDN9-201ENST00000445369 A0A1W2PNN7 141 aa11.29□□□□□ -0.6
CLDN9-201ENST00000445369 FUSP35637 526 aaKnown RBP eCLIP11.28□□□□□ -0.6
CLDN9-201ENST00000445369 TMEM258P61165 79 aa11.28□□□□□ -0.6
CLDN9-201ENST00000445369 C1orf137Q5JT78 98 aa11.28□□□□□ -0.6
CLDN9-201ENST00000445369 STAB2Q8WWQ8 2551 aa11.28□□□□□ -0.6
CLDN9-201ENST00000445369 C14orf177Q52M58 125 aa11.27□□□□□ -0.61
CLDN9-201ENST00000445369 IGKV4-1P06312 121 aa11.26□□□□□ -0.61
CLDN9-201ENST00000445369 Q8NBF4 154 aa11.26□□□□□ -0.61
CLDN9-201ENST00000445369 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.25□□□□□ -0.61
CLDN9-201ENST00000445369 SMIM29Q86T20 159 aa11.24□□□□□ -0.61
CLDN9-201ENST00000445369 C20orf197Q8N268 126 aa11.24□□□□□ -0.61
CLDN9-201ENST00000445369 Q8N9L7 120 aa11.24□□□□□ -0.61
CLDN9-201ENST00000445369 DNHD1Q96M86 4753 aa11.24□□□□□ -0.61
CLDN9-201ENST00000445369 BPY2O14599 106 aa11.23□□□□□ -0.61
CLDN9-201ENST00000445369 SPRR4Q96PI1 79 aa11.23□□□□□ -0.61
CLDN9-201ENST00000445369 PRLHP81277 87 aa11.21□□□□□ -0.61
CLDN9-201ENST00000445369 LRCOL1A6NCL2 159 aa11.2□□□□□ -0.62
CLDN9-201ENST00000445369 DNAH7Q8WXX0 4024 aa11.2□□□□□ -0.62
CLDN9-201ENST00000445369 CHTF8P0CG12 524 aa11.2□□□□□ -0.62
CLDN9-201ENST00000445369 CSMD3Q7Z407 3707 aa11.19□□□□□ -0.62
CLDN9-201ENST00000445369 NBDYA0A0U1RRE5 68 aa11.19□□□□□ -0.62
CLDN9-201ENST00000445369 NUPR2A6NF83 97 aa11.19□□□□□ -0.62
CLDN9-201ENST00000445369 C9orf163Q8N9P6 203 aa11.18□□□□□ -0.62
CLDN9-201ENST00000445369 LINC00476Q8WZB0 136 aa11.18□□□□□ -0.62
CLDN9-201ENST00000445369 PLECQ15149 4684 aaKnown RBP11.18□□□□□ -0.62
CLDN9-201ENST00000445369 J3KT08 172 aa11.17□□□□□ -0.62
CLDN9-201ENST00000445369 KLKP1Q107X0 134 aa11.17□□□□□ -0.62
CLDN9-201ENST00000445369 PHF5AQ7RTV0 110 aaKnown RBP11.17□□□□□ -0.62
CLDN9-201ENST00000445369 KRTAP11-1Q8IUC1 163 aa11.17□□□□□ -0.62
CLDN9-201ENST00000445369 F8WEM9 126 aa11.16□□□□□ -0.62
CLDN9-201ENST00000445369 RPS28P62857 69 aaKnown RBP11.16□□□□□ -0.62
CLDN9-201ENST00000445369 Q6ZRN7 208 aaPredicted RBP11.16□□□□□ -0.62
CLDN9-201ENST00000445369 HIGD2AQ9BW72 106 aa11.15□□□□□ -0.62
CLDN9-201ENST00000445369 DPH3Q96FX2 82 aa11.15□□□□□ -0.63
CLDN9-201ENST00000445369 PKIGQ9Y2B9 76 aa11.14□□□□□ -0.63
CLDN9-201ENST00000445369 IGLV8-61A0A075B6I0 122 aa11.13□□□□□ -0.63
CLDN9-201ENST00000445369 IGFL1Q6UW32 110 aa11.13□□□□□ -0.63
CLDN9-201ENST00000445369 H7BZZ5 65 aa11.13□□□□□ -0.63
CLDN9-201ENST00000445369 H0Y9J4 135 aa11.12□□□□□ -0.63
CLDN9-201ENST00000445369 EPM2AB3EWF7 344 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms