RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 RETNLBQ9BQ08 111 aa12.23□□□□□ -0.45
CDKN3-204ENST00000442975 Q6ZRX8 168 aa12.22□□□□□ -0.45
CDKN3-204ENST00000442975 ATOH7Q8N100 152 aa12.22□□□□□ -0.45
CDKN3-204ENST00000442975 SPANXCQ9NY87 97 aa12.21□□□□□ -0.45
CDKN3-204ENST00000442975 ERC2-IT1O76042 136 aa12.2□□□□□ -0.46
CDKN3-204ENST00000442975 GAGE2AQ6NT46 116 aa12.2□□□□□ -0.46
CDKN3-204ENST00000442975 Q9BRP9 147 aa12.2□□□□□ -0.46
CDKN3-204ENST00000442975 ZNF73O43830 326 aaPredicted RBP12.19□□□□□ -0.46
CDKN3-204ENST00000442975 SCGB1D4Q6XE38 83 aa12.19□□□□□ -0.46
CDKN3-204ENST00000442975 OR13C6PQ8NH95 151 aa12.19□□□□□ -0.46
CDKN3-204ENST00000442975 ANKRD39Q53RE8 183 aa12.17□□□□□ -0.46
CDKN3-204ENST00000442975 JOSD1Q15040 202 aaPredicted RBP12.16□□□□□ -0.46
CDKN3-204ENST00000442975 LINC00483Q53H64 154 aa12.16□□□□□ -0.46
CDKN3-204ENST00000442975 Q8NBF4 154 aa12.16□□□□□ -0.46
CDKN3-204ENST00000442975 CBY1Q9Y3M2 126 aa12.15□□□□□ -0.46
CDKN3-204ENST00000442975 IGLV9-49A0A0B4J1Y8 123 aa12.14□□□□□ -0.47
CDKN3-204ENST00000442975 S100A1P23297 94 aa12.14□□□□□ -0.47
CDKN3-204ENST00000442975 C4orf48Q5BLP8 95 aa12.14□□□□□ -0.47
CDKN3-204ENST00000442975 S100A2P29034 98 aa12.13□□□□□ -0.47
CDKN3-204ENST00000442975 HINT1P49773 126 aaPredicted RBP12.13□□□□□ -0.47
CDKN3-204ENST00000442975 SPAG11AQ6PDA7 123 aa12.13□□□□□ -0.47
CDKN3-204ENST00000442975 AKR1D1P51857 326 aa12.12□□□□□ -0.47
CDKN3-204ENST00000442975 MOBPQ13875 183 aa12.12□□□□□ -0.47
CDKN3-204ENST00000442975 SPANXDQ9BXN6 97 aa12.12□□□□□ -0.47
CDKN3-204ENST00000442975 PCP2Q8IVA1 136 aa12.1□□□□□ -0.47
CDKN3-204ENST00000442975 HIST3H2BBQ8N257 126 aa12.1□□□□□ -0.47
CDKN3-204ENST00000442975 CTAG1AP78358 180 aa12.09□□□□□ -0.47
CDKN3-204ENST00000442975 HIST1H2BLQ99880 126 aa12.09□□□□□ -0.47
CDKN3-204ENST00000442975 LINC00518Q8N0U6 118 aa12.08□□□□□ -0.48
CDKN3-204ENST00000442975 ST20-AS1Q8NBB2 130 aa12.08□□□□□ -0.48
CDKN3-204ENST00000442975 IGLV7-46A0A075B6I9 117 aa12.07□□□□□ -0.48
CDKN3-204ENST00000442975 COPS9Q8WXC6 57 aa12.07□□□□□ -0.48
CDKN3-204ENST00000442975 S100A6P06703 90 aa12.06□□□□□ -0.48
CDKN3-204ENST00000442975 C9orf153Q5TBE3 101 aa12.06□□□□□ -0.48
CDKN3-204ENST00000442975 C6orf99Q4VX62 202 aa12.04□□□□□ -0.48
CDKN3-204ENST00000442975 IFITM1P13164 125 aa12.03□□□□□ -0.48
CDKN3-204ENST00000442975 SNRPEP62304 92 aaKnown RBP12.03□□□□□ -0.48
CDKN3-204ENST00000442975 HSBP1L1C9JCN9 74 aa12.02□□□□□ -0.49
CDKN3-204ENST00000442975 SPINK1P00995 79 aa12.02□□□□□ -0.49
CDKN3-204ENST00000442975 COX7BP24311 80 aa12.02□□□□□ -0.49
CDKN3-204ENST00000442975 DHRS4-AS1Q9P1J3 65 aa12.02□□□□□ -0.49
CDKN3-204ENST00000442975 A6NDN8 102 aa12.01□□□□□ -0.49
CDKN3-204ENST00000442975 Q6ZVH6 145 aa12.01□□□□□ -0.49
CDKN3-204ENST00000442975 MUSTN1Q8IVN3 82 aa12.01□□□□□ -0.49
CDKN3-204ENST00000442975 CDIP1Q9H305 208 aa12.01□□□□□ -0.49
CDKN3-204ENST00000442975 ELOF1P60002 83 aaKnown RBP12□□□□□ -0.49
CDKN3-204ENST00000442975 TPRXLQ17RH7 258 aa12□□□□□ -0.49
CDKN3-204ENST00000442975 SSBP3-AS1Q7Z2R9 100 aa12□□□□□ -0.49
CDKN3-204ENST00000442975 MUC2Q02817 5179 aa11.99□□□□□ -0.49
CDKN3-204ENST00000442975 C5orf52A6NGY3 159 aa11.97□□□□□ -0.49
CDKN3-204ENST00000442975 FP248Q71RG6 208 aaPredicted RBP11.96□□□□□ -0.49
CDKN3-204ENST00000442975 SLC25A34Q6PIV7 304 aa11.93□□□□□ -0.5
CDKN3-204ENST00000442975 TRAV13-2A0A0B4J235 113 aa11.92□□□□□ -0.5
CDKN3-204ENST00000442975 SCGB1D1O95968 90 aa11.92□□□□□ -0.5
CDKN3-204ENST00000442975 SPRR1BP22528 89 aa11.92□□□□□ -0.5
CDKN3-204ENST00000442975 DEFB105AQ8NG35 78 aa11.92□□□□□ -0.5
CDKN3-204ENST00000442975 A0A1B0GWB2 263 aa11.91□□□□□ -0.5
CDKN3-204ENST00000442975 MUC17Q685J3 4493 aa11.9□□□□□ -0.5
CDKN3-204ENST00000442975 TRBV7-6A0A0J9YX20 115 aa11.9□□□□□ -0.5
CDKN3-204ENST00000442975 RPS29P62273 56 aaKnown RBP11.9□□□□□ -0.5
CDKN3-204ENST00000442975 TAL2Q16559 108 aa11.9□□□□□ -0.5
CDKN3-204ENST00000442975 Q8N377 158 aa11.9□□□□□ -0.5
CDKN3-204ENST00000442975 LAMTOR3Q9UHA4 124 aa11.9□□□□□ -0.5
CDKN3-204ENST00000442975 Q1RN00 199 aa11.88□□□□□ -0.51
CDKN3-204ENST00000442975 SLC25A20O43772 301 aa11.87□□□□□ -0.51
CDKN3-204ENST00000442975 SMIM11BQ8TCY0 68 aa11.87□□□□□ -0.51
CDKN3-204ENST00000442975 HRCT1Q6UXD1 115 aa11.86□□□□□ -0.51
CDKN3-204ENST00000442975 TEX49A0A1B0GTD5 131 aa11.85□□□□□ -0.51
CDKN3-204ENST00000442975 A4D1N5 150 aa11.84□□□□□ -0.51
CDKN3-204ENST00000442975 KRTAP13-3Q3SY46 172 aa11.84□□□□□ -0.51
CDKN3-204ENST00000442975 NHP2Q9NX24 153 aaKnown RBP11.82□□□□□ -0.52
CDKN3-204ENST00000442975 C12orf57Q99622 126 aa11.81□□□□□ -0.52
CDKN3-204ENST00000442975 A0A0U1RQV1 116 aa11.8□□□□□ -0.52
CDKN3-204ENST00000442975 HIST1H4GQ99525 98 aa11.8□□□□□ -0.52
CDKN3-204ENST00000442975 COX8AP10176 69 aa11.79□□□□□ -0.52
CDKN3-204ENST00000442975 LIMD2Q9BT23 127 aa11.79□□□□□ -0.52
CDKN3-204ENST00000442975 IGLV5-48A0A075B6I7 105 aa11.78□□□□□ -0.52
CDKN3-204ENST00000442975 VAMP3Q15836 100 aa11.78□□□□□ -0.52
CDKN3-204ENST00000442975 LINC01547P58512 204 aaPredicted RBP11.77□□□□□ -0.53
CDKN3-204ENST00000442975 PRO1933Q9H354 126 aa11.77□□□□□ -0.53
CDKN3-204ENST00000442975 SMIM29Q86T20 159 aa11.76□□□□□ -0.53
CDKN3-204ENST00000442975 PAM16Q9Y3D7 125 aa11.75□□□□□ -0.53
CDKN3-204ENST00000442975 C14orf144Q96I85 54 aa11.73□□□□□ -0.53
CDKN3-204ENST00000442975 H7C2G1 150 aa11.72□□□□□ -0.53
CDKN3-204ENST00000442975 DLEU1O43261 78 aa11.72□□□□□ -0.53
CDKN3-204ENST00000442975 SPATA45Q537H7 98 aa11.72□□□□□ -0.53
CDKN3-204ENST00000442975 LINC00575Q6W349 94 aa11.71□□□□□ -0.53
CDKN3-204ENST00000442975 VAMP8Q9BV40 100 aa11.71□□□□□ -0.53
CDKN3-204ENST00000442975 A0A0G2JQZ4 141 aa11.7□□□□□ -0.54
CDKN3-204ENST00000442975 CD164Q04900 197 aa11.7□□□□□ -0.54
CDKN3-204ENST00000442975 FAT4Q6V0I7 4981 aa11.69□□□□□ -0.54
CDKN3-204ENST00000442975 F8WEM9 126 aa11.69□□□□□ -0.54
CDKN3-204ENST00000442975 Q6ZQY7 126 aa11.69□□□□□ -0.54
CDKN3-204ENST00000442975 hADV29S1A0JD25 119 aa11.68□□□□□ -0.54
CDKN3-204ENST00000442975 ASB16-AS1Q495Z4 193 aa11.65□□□□□ -0.54
CDKN3-204ENST00000442975 BVES-AS1Q5T3Y7 98 aa11.65□□□□□ -0.54
CDKN3-204ENST00000442975 RAB37Q96AX2 223 aa11.65□□□□□ -0.54
CDKN3-204ENST00000442975 SEC61BP60468 96 aaKnown RBP11.64□□□□□ -0.55
CDKN3-204ENST00000442975 XP32Q5T750 250 aa11.63□□□□□ -0.55
CDKN3-204ENST00000442975 HIGD1BQ9P298 99 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms