RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 FLG2Q5D862 2391 aaPredicted RBP4.83□□□□□ -1.64
CDC42BPA-208ENST00000442054 NDUFC2O95298 119 aa4.83□□□□□ -1.64
CDC42BPA-208ENST00000442054 KRTAP10-2P60368 255 aa4.83□□□□□ -1.64
CDC42BPA-208ENST00000442054 CYSTM1Q9H1C7 97 aa4.83□□□□□ -1.64
CDC42BPA-208ENST00000442054 COL7A1Q02388 2944 aa4.83□□□□□ -1.64
CDC42BPA-208ENST00000442054 DMBT1Q9UGM3 2413 aaPredicted RBP4.83□□□□□ -1.64
CDC42BPA-208ENST00000442054 LINC00846Q9NV44 126 aa4.83□□□□□ -1.64
CDC42BPA-208ENST00000442054 H0YGX0 51 aa4.82□□□□□ -1.64
CDC42BPA-208ENST00000442054 XAGE1AQ9HD64 81 aa4.82□□□□□ -1.64
CDC42BPA-208ENST00000442054 INAFM2P0DMQ5 153 aa4.81□□□□□ -1.64
CDC42BPA-208ENST00000442054 RPL37AP61513 92 aaKnown RBP4.81□□□□□ -1.64
CDC42BPA-208ENST00000442054 COX17Q14061 63 aa4.81□□□□□ -1.64
CDC42BPA-208ENST00000442054 FAM236AA0A1B0GUQ0 79 aa4.81□□□□□ -1.64
CDC42BPA-208ENST00000442054 FAM236BA0A1B0GV22 79 aa4.81□□□□□ -1.64
CDC42BPA-208ENST00000442054 OXTP01178 125 aa4.81□□□□□ -1.64
CDC42BPA-208ENST00000442054 CHTF8P0CG12 524 aa4.81□□□□□ -1.64
CDC42BPA-208ENST00000442054 UBE2AP49459 152 aa4.81□□□□□ -1.64
CDC42BPA-208ENST00000442054 S100A7L2Q5SY68 101 aa4.81□□□□□ -1.64
CDC42BPA-208ENST00000442054 KRTAP26-1Q6PEX3 210 aa4.81□□□□□ -1.64
CDC42BPA-208ENST00000442054 PRR34Q9NV39 138 aa4.81□□□□□ -1.64
CDC42BPA-208ENST00000442054 Q6JHZ5 121 aa4.81□□□□□ -1.64
CDC42BPA-208ENST00000442054 PRR3P79522 188 aaKnown RBP4.8□□□□□ -1.64
CDC42BPA-208ENST00000442054 UNQ6190/PRO20217Q6UXQ8 127 aa4.8□□□□□ -1.64
CDC42BPA-208ENST00000442054 IGLV6-57P01721 117 aa4.79□□□□□ -1.64
CDC42BPA-208ENST00000442054 CRYGAP11844 174 aa4.79□□□□□ -1.64
CDC42BPA-208ENST00000442054 C3orf22Q8N5N4 141 aa4.79□□□□□ -1.64
CDC42BPA-208ENST00000442054 C14orf132Q9NPU4 83 aa4.79□□□□□ -1.64
CDC42BPA-208ENST00000442054 CCKP06307 115 aa4.79□□□□□ -1.64
CDC42BPA-208ENST00000442054 NCR3O14931 201 aa4.79□□□□□ -1.64
CDC42BPA-208ENST00000442054 C9orf116Q5BN46 136 aaPredicted RBP4.79□□□□□ -1.64
CDC42BPA-208ENST00000442054 Q6ZRU5 148 aa4.79□□□□□ -1.64
CDC42BPA-208ENST00000442054 C9orf163Q8N9P6 203 aa4.79□□□□□ -1.64
CDC42BPA-208ENST00000442054 SLPIP03973 132 aa4.78□□□□□ -1.64
CDC42BPA-208ENST00000442054 C10orf25Q5T742 122 aa4.78□□□□□ -1.64
CDC42BPA-208ENST00000442054 GVQW2A0A096LPI5 108 aaPredicted RBP4.78□□□□□ -1.64
CDC42BPA-208ENST00000442054 KRTAP10-1P60331 282 aa4.78□□□□□ -1.64
CDC42BPA-208ENST00000442054 C1orf137Q5JT78 98 aa4.78□□□□□ -1.64
CDC42BPA-208ENST00000442054 Q5VSD8 79 aa4.78□□□□□ -1.64
CDC42BPA-208ENST00000442054 SCXQ7RTU7 201 aa4.77□□□□□ -1.65
CDC42BPA-208ENST00000442054 UQCRQO14949 82 aa4.77□□□□□ -1.65
CDC42BPA-208ENST00000442054 COX7CP15954 63 aa4.77□□□□□ -1.65
CDC42BPA-208ENST00000442054 LINC00575Q6W349 94 aa4.77□□□□□ -1.65
CDC42BPA-208ENST00000442054 LOC110117498A0A087WWA1 95 aa4.76□□□□□ -1.65
CDC42BPA-208ENST00000442054 GAGE2AQ6NT46 116 aa4.76□□□□□ -1.65
CDC42BPA-208ENST00000442054 Q6ZQT0 140 aa4.75□□□□□ -1.65
CDC42BPA-208ENST00000442054 HIGD2AQ9BW72 106 aa4.75□□□□□ -1.65
CDC42BPA-208ENST00000442054 ETDCA0A1B0GVM5 59 aa4.75□□□□□ -1.65
CDC42BPA-208ENST00000442054 CIRBP-AS1Q8TBR5 109 aa4.74□□□□□ -1.65
CDC42BPA-208ENST00000442054 ORMDL1Q9P0S3 153 aa4.74□□□□□ -1.65
CDC42BPA-208ENST00000442054 REG3GQ6UW15 175 aa4.74□□□□□ -1.65
CDC42BPA-208ENST00000442054 A0A087WVE0 104 aa4.74□□□□□ -1.65
CDC42BPA-208ENST00000442054 Q6ZRP5 223 aa4.74□□□□□ -1.65
CDC42BPA-208ENST00000442054 PRKDCP78527 4128 aaKnown RBP4.73□□□□□ -1.65
CDC42BPA-208ENST00000442054 HECTD4Q9Y4D8 3996 aa4.73□□□□□ -1.65
CDC42BPA-208ENST00000442054 A0A096LNI7 61 aa4.73□□□□□ -1.65
CDC42BPA-208ENST00000442054 TRBV10-3A0A0K0K1G6 114 aa4.73□□□□□ -1.65
CDC42BPA-208ENST00000442054 CDK2AP2O75956 126 aa4.73□□□□□ -1.65
CDC42BPA-208ENST00000442054 FAM19A1Q7Z5A9 133 aa4.73□□□□□ -1.65
CDC42BPA-208ENST00000442054 RPL37AP8A6NKH3 93 aa4.73□□□□□ -1.65
CDC42BPA-208ENST00000442054 NDUFC2-KCTD14E9PQ53 114 aa4.73□□□□□ -1.65
CDC42BPA-208ENST00000442054 C6orf48Q9UBA6 75 aa4.73□□□□□ -1.65
CDC42BPA-208ENST00000442054 TMEM256-PLSCR3K7ERE1 68 aa4.72□□□□□ -1.65
CDC42BPA-208ENST00000442054 SERTAD4-AS1Q5TG53 156 aa4.72□□□□□ -1.65
CDC42BPA-208ENST00000442054 Q6ZRN7 208 aaPredicted RBP4.72□□□□□ -1.65
CDC42BPA-208ENST00000442054 TRBV7-6A0A0J9YX20 115 aa4.71□□□□□ -1.65
CDC42BPA-208ENST00000442054 J3KT08 172 aa4.71□□□□□ -1.65
CDC42BPA-208ENST00000442054 ATOX1O00244 68 aa4.71□□□□□ -1.65
CDC42BPA-208ENST00000442054 JMJD7-PLA2G4BH0Y9G9 81 aa4.71□□□□□ -1.66
CDC42BPA-208ENST00000442054 C6orf99Q4VX62 202 aa4.71□□□□□ -1.66
CDC42BPA-208ENST00000442054 C15orf56Q8N910 161 aa4.71□□□□□ -1.66
CDC42BPA-208ENST00000442054 TRBV7-4A0A0J9YYF1 115 aa4.71□□□□□ -1.66
CDC42BPA-208ENST00000442054 Q8N1X5 172 aa4.71□□□□□ -1.66
CDC42BPA-208ENST00000442054 FAM30AQ9NZY2 134 aa4.71□□□□□ -1.66
CDC42BPA-208ENST00000442054 IGKV3D-7A0A0C4DH55 119 aa4.7□□□□□ -1.66
CDC42BPA-208ENST00000442054 DNAL4O96015 105 aa4.7□□□□□ -1.66
CDC42BPA-208ENST00000442054 PHF5AQ7RTV0 110 aaKnown RBP4.7□□□□□ -1.66
CDC42BPA-208ENST00000442054 CNBPP62633 177 aaKnown RBP4.7□□□□□ -1.66
CDC42BPA-208ENST00000442054 VPREB1P12018 145 aa4.7□□□□□ -1.66
CDC42BPA-208ENST00000442054 ATP5EP2Q5VTU8 51 aa4.7□□□□□ -1.66
CDC42BPA-208ENST00000442054 SERP2Q8N6R1 65 aa4.7□□□□□ -1.66
CDC42BPA-208ENST00000442054 DIRC1Q969H9 104 aa4.7□□□□□ -1.66
CDC42BPA-208ENST00000442054 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.69□□□□□ -1.66
CDC42BPA-208ENST00000442054 ELOF1P60002 83 aaKnown RBP4.69□□□□□ -1.66
CDC42BPA-208ENST00000442054 PRO0628Q9UI54 55 aa4.68□□□□□ -1.66
CDC42BPA-208ENST00000442054 C9orf153Q5TBE3 101 aa4.68□□□□□ -1.66
CDC42BPA-208ENST00000442054 PLECQ15149 4684 aaKnown RBP4.68□□□□□ -1.66
CDC42BPA-208ENST00000442054 SRRM2Q9UQ35 2752 aaKnown RBP4.68□□□□□ -1.66
CDC42BPA-208ENST00000442054 C4orf26Q17RF5 130 aa4.68□□□□□ -1.66
CDC42BPA-208ENST00000442054 hADV29S1A0JD25 119 aa4.67□□□□□ -1.66
CDC42BPA-208ENST00000442054 BCE1O60756 84 aa4.67□□□□□ -1.66
CDC42BPA-208ENST00000442054 LINC01547P58512 204 aaPredicted RBP4.67□□□□□ -1.66
CDC42BPA-208ENST00000442054 KRTAP4-16G5E9R7 235 aaPredicted RBP4.67□□□□□ -1.66
CDC42BPA-208ENST00000442054 MRPL55Q7Z7F7 128 aaKnown RBP4.67□□□□□ -1.66
CDC42BPA-208ENST00000442054 KRTAP7-1Q8IUC3 87 aa4.67□□□□□ -1.66
CDC42BPA-208ENST00000442054 A0A0A0MQY5 61 aa4.66□□□□□ -1.66
CDC42BPA-208ENST00000442054 A0A1B0GVY2 172 aa4.65□□□□□ -1.66
CDC42BPA-208ENST00000442054 H3BS24 57 aa4.65□□□□□ -1.66
CDC42BPA-208ENST00000442054 VPS13DQ5THJ4 4388 aa4.65□□□□□ -1.67
CDC42BPA-208ENST00000442054 Q6ZVQ6 151 aa4.65□□□□□ -1.67
CDC42BPA-208ENST00000442054 DNAH2Q9P225 4427 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms