RNA–Protein interactions for RNA: ENST00000441141.5

VPS8-208, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-208ENST00000441141 NLRP1Q9C000 1473 aa-0.32□□□□□ -2.46
VPS8-208ENST00000441141 MRC2Q9UBG0 1479 aa-0.32□□□□□ -2.46
VPS8-208ENST00000441141 TMEM262E9PQX1 116 aa-0.32□□□□□ -2.46
VPS8-208ENST00000441141 SPINK4O60575 86 aa-0.32□□□□□ -2.46
VPS8-208ENST00000441141 MT1AP04731 61 aa-0.32□□□□□ -2.46
VPS8-208ENST00000441141 KRTDAPP60985 99 aa-0.32□□□□□ -2.46
VPS8-208ENST00000441141 HSD52Q0P140 79 aa-0.32□□□□□ -2.46
VPS8-208ENST00000441141 DEFB135Q30KP9 77 aa-0.32□□□□□ -2.46
VPS8-208ENST00000441141 GTF2H5Q6ZYL4 71 aa-0.32□□□□□ -2.46
VPS8-208ENST00000441141 DEFB105AQ8NG35 78 aa-0.32□□□□□ -2.46
VPS8-208ENST00000441141 LINC00846Q9NV44 126 aa-0.32□□□□□ -2.46
VPS8-208ENST00000441141 RANBP2P49792 3224 aaKnown RBP-0.32□□□□□ -2.46
VPS8-208ENST00000441141 CICQ96RK0 1608 aaPredicted RBP-0.32□□□□□ -2.46
VPS8-208ENST00000441141 ALKQ9UM73 1620 aa-0.32□□□□□ -2.46
VPS8-208ENST00000441141 DNAH17Q9UFH2 4485 aa-0.32□□□□□ -2.46
VPS8-208ENST00000441141 NCOA3Q9Y6Q9 1424 aa-0.32□□□□□ -2.46
VPS8-208ENST00000441141 TLN1Q9Y490 2541 aaKnown RBP-0.32□□□□□ -2.46
VPS8-208ENST00000441141 RGPD8O14715 1765 aaPredicted RBP-0.32□□□□□ -2.46
VPS8-208ENST00000441141 RGPD5Q99666 1765 aa-0.32□□□□□ -2.46
VPS8-208ENST00000441141 DDX60LQ5H9U9 1706 aaKnown RBP-0.33□□□□□ -2.46
VPS8-208ENST00000441141 ZNF831Q5JPB2 1677 aa-0.33□□□□□ -2.46
VPS8-208ENST00000441141 PLEKHH2Q8IVE3 1493 aa-0.33□□□□□ -2.46
VPS8-208ENST00000441141 SEC11AP67812 179 aa-0.33□□□□□ -2.46
VPS8-208ENST00000441141 LELP1Q5T871 98 aa-0.33□□□□□ -2.46
VPS8-208ENST00000441141 TROQ12816 1431 aaPredicted RBP-0.33□□□□□ -2.46
VPS8-208ENST00000441141 SETBP1Q9Y6X0 1596 aa-0.33□□□□□ -2.46
VPS8-208ENST00000441141 TJP1Q07157 1748 aa-0.33□□□□□ -2.46
VPS8-208ENST00000441141 DNAH5Q8TE73 4624 aa-0.33□□□□□ -2.46
VPS8-208ENST00000441141 CHD7Q9P2D1 2997 aa-0.33□□□□□ -2.46
VPS8-208ENST00000441141 CLTCQ00610 1675 aaKnown RBP-0.33□□□□□ -2.46
VPS8-208ENST00000441141 A0A087WVE0 104 aa-0.34□□□□□ -2.46
VPS8-208ENST00000441141 C20orf202A1L168 122 aa-0.34□□□□□ -2.46
VPS8-208ENST00000441141 ABCC5O15440 1437 aa-0.34□□□□□ -2.46
VPS8-208ENST00000441141 ITSN1Q15811 1721 aa-0.34□□□□□ -2.46
VPS8-208ENST00000441141 H1FX-AS1Q4G0G2 97 aa-0.34□□□□□ -2.46
VPS8-208ENST00000441141 ADGRG4Q8IZF6 3080 aa-0.34□□□□□ -2.46
VPS8-208ENST00000441141 CGREF1Q99674 301 aa-0.34□□□□□ -2.46
VPS8-208ENST00000441141 PARP4Q9UKK3 1724 aaKnown RBP-0.34□□□□□ -2.46
VPS8-208ENST00000441141 PLCH1Q4KWH8 1693 aa-0.34□□□□□ -2.46
VPS8-208ENST00000441141 ARFGEF2Q9Y6D5 1785 aa-0.34□□□□□ -2.46
VPS8-208ENST00000441141 CELSR3Q9NYQ7 3312 aa-0.35□□□□□ -2.46
VPS8-208ENST00000441141 TMEM131LA2VDJ0 1609 aa-0.35□□□□□ -2.46
VPS8-208ENST00000441141 USP32Q8NFA0 1604 aa-0.35□□□□□ -2.46
VPS8-208ENST00000441141 EYSQ5T1H1 3165 aa-0.35□□□□□ -2.46
VPS8-208ENST00000441141 PLXNC1O60486 1568 aa-0.35□□□□□ -2.47
VPS8-208ENST00000441141 EDC4Q6P2E9 1401 aaKnown RBP-0.35□□□□□ -2.47
VPS8-208ENST00000441141 C7orf77A4D0Y5 90 aa-0.35□□□□□ -2.47
VPS8-208ENST00000441141 SYS1-DBNDD2H3BUS1 97 aa-0.35□□□□□ -2.47
VPS8-208ENST00000441141 COX8AP10176 69 aa-0.35□□□□□ -2.47
VPS8-208ENST00000441141 USMG5Q96IX5 58 aa-0.35□□□□□ -2.47
VPS8-208ENST00000441141 CRIPTQ9P021 101 aa-0.35□□□□□ -2.47
VPS8-208ENST00000441141 APLNQ9ULZ1 77 aa-0.35□□□□□ -2.47
VPS8-208ENST00000441141 MAP3K1Q13233 1512 aa-0.35□□□□□ -2.47
VPS8-208ENST00000441141 CSMD1Q96PZ7 3565 aa-0.35□□□□□ -2.47
VPS8-208ENST00000441141 MGAQ8IWI9 3026 aa-0.35□□□□□ -2.47
VPS8-208ENST00000441141 ABCA13Q86UQ4 5058 aa-0.35□□□□□ -2.47
VPS8-208ENST00000441141 SMG1Q96Q15 3661 aaKnown RBP-0.36□□□□□ -2.47
VPS8-208ENST00000441141 WIZO95785 1651 aa-0.36□□□□□ -2.47
VPS8-208ENST00000441141 FAM135AQ9P2D6 1515 aa-0.36□□□□□ -2.47
VPS8-208ENST00000441141 C9orf62Q8N4C0 152 aa-0.36□□□□□ -2.47
VPS8-208ENST00000441141 MYO3AQ8NEV4 1616 aa-0.36□□□□□ -2.47
VPS8-208ENST00000441141 LY75O60449 1722 aa-0.36□□□□□ -2.47
VPS8-208ENST00000441141 TRIOO75962 3097 aa-0.36□□□□□ -2.47
VPS8-208ENST00000441141 ZC3H13Q5T200 1668 aaKnown RBP-0.37□□□□□ -2.47
VPS8-208ENST00000441141 CFAP43Q8NDM7 1665 aa-0.37□□□□□ -2.47
VPS8-208ENST00000441141 DMXL2Q8TDJ6 3036 aa-0.37□□□□□ -2.47
VPS8-208ENST00000441141 TOGARAM1Q9Y4F4 1720 aa-0.37□□□□□ -2.47
VPS8-208ENST00000441141 A0A0G2JND7 137 aa-0.37□□□□□ -2.47
VPS8-208ENST00000441141 A0A1B0GU69 56 aa-0.37□□□□□ -2.47
VPS8-208ENST00000441141 CPSF4LA6NMK7 179 aaKnown RBP-0.37□□□□□ -2.47
VPS8-208ENST00000441141 GNGT2O14610 69 aa-0.37□□□□□ -2.47
VPS8-208ENST00000441141 ASIPP42127 132 aa-0.37□□□□□ -2.47
VPS8-208ENST00000441141 KRTAP19-5Q3LI72 72 aa-0.37□□□□□ -2.47
VPS8-208ENST00000441141 VAMP8Q9BV40 100 aa-0.37□□□□□ -2.47
VPS8-208ENST00000441141 CACFD1Q9UGQ2 172 aa-0.37□□□□□ -2.47
VPS8-208ENST00000441141 NWD1Q149M9 1564 aa-0.37□□□□□ -2.47
VPS8-208ENST00000441141 SAMD9Q5K651 1589 aa-0.37□□□□□ -2.47
VPS8-208ENST00000441141 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.37□□□□□ -2.47
VPS8-208ENST00000441141 ITSN2Q9NZM3 1697 aa-0.37□□□□□ -2.47
VPS8-208ENST00000441141 ATMQ13315 3056 aa-0.37□□□□□ -2.47
VPS8-208ENST00000441141 DNAH10Q8IVF4 4471 aa-0.38□□□□□ -2.47
VPS8-208ENST00000441141 CDC42BPAQ5VT25 1732 aa-0.38□□□□□ -2.47
VPS8-208ENST00000441141 RICTORQ6R327 1708 aa-0.38□□□□□ -2.47
VPS8-208ENST00000441141 CRYBG3Q68DQ2 2970 aa-0.38□□□□□ -2.47
VPS8-208ENST00000441141 H3BNG1 76 aa-0.38□□□□□ -2.47
VPS8-208ENST00000441141 S100PP25815 95 aa-0.38□□□□□ -2.47
VPS8-208ENST00000441141 MT1HP80294 61 aa-0.38□□□□□ -2.47
VPS8-208ENST00000441141 WFDC13Q8IUB5 93 aa-0.38□□□□□ -2.47
VPS8-208ENST00000441141 MRPL34Q9BQ48 92 aaKnown RBP-0.38□□□□□ -2.47
VPS8-208ENST00000441141 CCDC141Q6ZP82 1450 aa-0.38□□□□□ -2.47
VPS8-208ENST00000441141 RNF17Q9BXT8 1623 aaKnown RBP-0.38□□□□□ -2.47
VPS8-208ENST00000441141 ZFYVE16Q7Z3T8 1539 aa-0.38□□□□□ -2.47
VPS8-208ENST00000441141 LRRC7Q96NW7 1537 aa-0.38□□□□□ -2.47
VPS8-208ENST00000441141 NHSQ6T4R5 1651 aa-0.39□□□□□ -2.47
VPS8-208ENST00000441141 NRXN1Q9ULB1 1477 aa-0.39□□□□□ -2.47
VPS8-208ENST00000441141 TRBV25-1A0A075B6N4 114 aa-0.39□□□□□ -2.47
VPS8-208ENST00000441141 C6orf201Q7Z4U5 140 aa-0.39□□□□□ -2.47
VPS8-208ENST00000441141 DEFB107AQ8IZN7 70 aa-0.39□□□□□ -2.47
VPS8-208ENST00000441141 C14orf144Q96I85 54 aa-0.39□□□□□ -2.47
VPS8-208ENST00000441141 NRAPQ86VF7 1730 aa-0.39□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 297.4 ms