RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 C9orf153Q5TBE3 101 aa10.43□□□□□ -0.74
AC004540.1-201ENST00000439120 SYS1-DBNDD2H3BUS1 97 aa10.42□□□□□ -0.74
AC004540.1-201ENST00000439120 RPS29P62273 56 aaKnown RBP10.42□□□□□ -0.74
AC004540.1-201ENST00000439120 KRTAP13-3Q3SY46 172 aa10.42□□□□□ -0.74
AC004540.1-201ENST00000439120 OR13C6PQ8NH95 151 aa10.41□□□□□ -0.74
AC004540.1-201ENST00000439120 EIF4EBP3O60516 100 aaPredicted RBP10.4□□□□□ -0.74
AC004540.1-201ENST00000439120 MUC17Q685J3 4493 aa10.4□□□□□ -0.75
AC004540.1-201ENST00000439120 SLC25A20O43772 301 aa10.39□□□□□ -0.75
AC004540.1-201ENST00000439120 Q8N377 158 aa10.39□□□□□ -0.75
AC004540.1-201ENST00000439120 SPANXCQ9NY87 97 aa10.39□□□□□ -0.75
AC004540.1-201ENST00000439120 HIST1H2BKO60814 126 aa10.37□□□□□ -0.75
AC004540.1-201ENST00000439120 HIST1H2BJP06899 126 aa10.37□□□□□ -0.75
AC004540.1-201ENST00000439120 HIST1H2BOP23527 126 aa10.37□□□□□ -0.75
AC004540.1-201ENST00000439120 HIST1H2BBP33778 126 aa10.37□□□□□ -0.75
AC004540.1-201ENST00000439120 HIST1H2BDP58876 126 aa10.37□□□□□ -0.75
AC004540.1-201ENST00000439120 HIST1H2BCP62807 126 aa10.37□□□□□ -0.75
AC004540.1-201ENST00000439120 HIST2H2BEQ16778 126 aa10.37□□□□□ -0.75
AC004540.1-201ENST00000439120 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.37□□□□□ -0.75
AC004540.1-201ENST00000439120 LINC00308Q8TCZ7 52 aa10.37□□□□□ -0.75
AC004540.1-201ENST00000439120 HIST1H2BHQ93079 126 aa10.37□□□□□ -0.75
AC004540.1-201ENST00000439120 HIST1H2BNQ99877 126 aa10.37□□□□□ -0.75
AC004540.1-201ENST00000439120 HIST1H2BMQ99879 126 aa10.37□□□□□ -0.75
AC004540.1-201ENST00000439120 C5orf52A6NGY3 159 aa10.36□□□□□ -0.75
AC004540.1-201ENST00000439120 ZNF815PA8K554 130 aa10.36□□□□□ -0.75
AC004540.1-201ENST00000439120 TIMM17BO60830 172 aa10.36□□□□□ -0.75
AC004540.1-201ENST00000439120 LCE2AQ5TA79 106 aaPredicted RBP10.36□□□□□ -0.75
AC004540.1-201ENST00000439120 PET117Q6UWS5 81 aa10.36□□□□□ -0.75
AC004540.1-201ENST00000439120 ST20-AS1Q8NBB2 130 aa10.36□□□□□ -0.75
AC004540.1-201ENST00000439120 LINC01545Q5VT33 79 aa10.35□□□□□ -0.75
AC004540.1-201ENST00000439120 SLC25A34Q6PIV7 304 aa10.34□□□□□ -0.75
AC004540.1-201ENST00000439120 LITAFQ99732 161 aa10.34□□□□□ -0.75
AC004540.1-201ENST00000439120 FAT4Q6V0I7 4981 aa10.33□□□□□ -0.76
AC004540.1-201ENST00000439120 SEC61BP60468 96 aaKnown RBP10.33□□□□□ -0.76
AC004540.1-201ENST00000439120 ASB16-AS1Q495Z4 193 aa10.33□□□□□ -0.76
AC004540.1-201ENST00000439120 SPANXDQ9BXN6 97 aa10.33□□□□□ -0.76
AC004540.1-201ENST00000439120 DHRS4-AS1Q9P1J3 65 aa10.33□□□□□ -0.76
AC004540.1-201ENST00000439120 LINC00518Q8N0U6 118 aa10.31□□□□□ -0.76
AC004540.1-201ENST00000439120 TTTY13Q9BZ97 58 aa10.29□□□□□ -0.76
AC004540.1-201ENST00000439120 C3orf79P0CE67 100 aa10.28□□□□□ -0.76
AC004540.1-201ENST00000439120 COX7BP24311 80 aa10.28□□□□□ -0.76
AC004540.1-201ENST00000439120 KRTDAPP60985 99 aa10.28□□□□□ -0.76
AC004540.1-201ENST00000439120 SCGB1D4Q6XE38 83 aa10.28□□□□□ -0.76
AC004540.1-201ENST00000439120 LIMD2Q9BT23 127 aa10.28□□□□□ -0.76
AC004540.1-201ENST00000439120 KRTAP9-2Q9BYQ4 174 aa10.28□□□□□ -0.76
AC004540.1-201ENST00000439120 LAMTOR3Q9UHA4 124 aa10.28□□□□□ -0.76
AC004540.1-201ENST00000439120 SPRR1BP22528 89 aa10.27□□□□□ -0.77
AC004540.1-201ENST00000439120 S100A1P23297 94 aa10.27□□□□□ -0.77
AC004540.1-201ENST00000439120 C20orf202A1L168 122 aa10.26□□□□□ -0.77
AC004540.1-201ENST00000439120 ELOF1P60002 83 aaKnown RBP10.26□□□□□ -0.77
AC004540.1-201ENST00000439120 C6orf99Q4VX62 202 aa10.26□□□□□ -0.77
AC004540.1-201ENST00000439120 HRCT1Q6UXD1 115 aa10.26□□□□□ -0.77
AC004540.1-201ENST00000439120 COPS9Q8WXC6 57 aa10.26□□□□□ -0.77
AC004540.1-201ENST00000439120 TAL2Q16559 108 aa10.25□□□□□ -0.77
AC004540.1-201ENST00000439120 DEFB105AQ8NG35 78 aa10.23□□□□□ -0.77
AC004540.1-201ENST00000439120 LINC01547P58512 204 aaPredicted RBP10.22□□□□□ -0.77
AC004540.1-201ENST00000439120 XP32Q5T750 250 aa10.22□□□□□ -0.77
AC004540.1-201ENST00000439120 Q1RN00 199 aa10.21□□□□□ -0.77
AC004540.1-201ENST00000439120 A6NDN8 102 aa10.2□□□□□ -0.78
AC004540.1-201ENST00000439120 COA6Q5JTJ3 125 aaKnown RBP10.2□□□□□ -0.78
AC004540.1-201ENST00000439120 TRBV7-6A0A0J9YX20 115 aa10.19□□□□□ -0.78
AC004540.1-201ENST00000439120 TEX49A0A1B0GTD5 131 aa10.19□□□□□ -0.78
AC004540.1-201ENST00000439120 IFITM1P13164 125 aa10.19□□□□□ -0.78
AC004540.1-201ENST00000439120 A0A1B0GWB2 263 aa10.18□□□□□ -0.78
AC004540.1-201ENST00000439120 ANKRD39Q53RE8 183 aa10.18□□□□□ -0.78
AC004540.1-201ENST00000439120 ATOH7Q8N100 152 aa10.18□□□□□ -0.78
AC004540.1-201ENST00000439120 KRTAP4-1Q9BYQ7 146 aa10.18□□□□□ -0.78
AC004540.1-201ENST00000439120 AKR1D1P51857 326 aa10.17□□□□□ -0.78
AC004540.1-201ENST00000439120 Q6ZVH6 145 aa10.17□□□□□ -0.78
AC004540.1-201ENST00000439120 PRO1933Q9H354 126 aa10.17□□□□□ -0.78
AC004540.1-201ENST00000439120 H7C2G1 150 aa10.15□□□□□ -0.78
AC004540.1-201ENST00000439120 CD164Q04900 197 aa10.15□□□□□ -0.78
AC004540.1-201ENST00000439120 MUSTN1Q8IVN3 82 aa10.14□□□□□ -0.79
AC004540.1-201ENST00000439120 C9orf92A6NGG3 77 aa10.13□□□□□ -0.79
AC004540.1-201ENST00000439120 PCP2Q8IVA1 136 aa10.13□□□□□ -0.79
AC004540.1-201ENST00000439120 A4D1N5 150 aa10.12□□□□□ -0.79
AC004540.1-201ENST00000439120 NHP2Q9NX24 153 aaKnown RBP10.12□□□□□ -0.79
AC004540.1-201ENST00000439120 TRAV13-2A0A0B4J235 113 aa10.11□□□□□ -0.79
AC004540.1-201ENST00000439120 IGLV5-48A0A075B6I7 105 aa10.09□□□□□ -0.79
AC004540.1-201ENST00000439120 SNRPEP62304 92 aaKnown RBP10.09□□□□□ -0.79
AC004540.1-201ENST00000439120 SMIM29Q86T20 159 aa10.08□□□□□ -0.8
AC004540.1-201ENST00000439120 SMIM11BQ8TCY0 68 aa10.07□□□□□ -0.8
AC004540.1-201ENST00000439120 PCOTHQ58A44 107 aa10.06□□□□□ -0.8
AC004540.1-201ENST00000439120 VAMP3Q15836 100 aa10.05□□□□□ -0.8
AC004540.1-201ENST00000439120 Q5XG85 94 aa10.05□□□□□ -0.8
AC004540.1-201ENST00000439120 IGLV8-61A0A075B6I0 122 aa10.04□□□□□ -0.8
AC004540.1-201ENST00000439120 A0A0G2JQZ4 141 aa10.03□□□□□ -0.8
AC004540.1-201ENST00000439120 HSBP1L1C9JCN9 74 aa10.03□□□□□ -0.8
AC004540.1-201ENST00000439120 F8WEM9 126 aa10.03□□□□□ -0.8
AC004540.1-201ENST00000439120 S100A2P29034 98 aa10.03□□□□□ -0.8
AC004540.1-201ENST00000439120 C1orf195Q5TG92 126 aa10.02□□□□□ -0.81
AC004540.1-201ENST00000439120 TCL1BO95988 128 aa10□□□□□ -0.81
AC004540.1-201ENST00000439120 KRTAP9-6A0A140TA67 174 aa9.99□□□□□ -0.81
AC004540.1-201ENST00000439120 HIST3H2BBQ8N257 126 aa9.97□□□□□ -0.81
AC004540.1-201ENST00000439120 HIST1H2BLQ99880 126 aa9.97□□□□□ -0.81
AC004540.1-201ENST00000439120 LINC00575Q6W349 94 aa9.96□□□□□ -0.82
AC004540.1-201ENST00000439120 hADV29S1A0JD25 119 aa9.95□□□□□ -0.82
AC004540.1-201ENST00000439120 Q6ZQY7 126 aa9.95□□□□□ -0.82
AC004540.1-201ENST00000439120 S100A6P06703 90 aa9.93□□□□□ -0.82
AC004540.1-201ENST00000439120 LCE2CQ5TA81 110 aa9.93□□□□□ -0.82
AC004540.1-201ENST00000439120 Q6JHZ5 121 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms