RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 M0R2N4 97 aa12.54□□□□□ -0.4
VRK2-205ENST00000432057 C21orf62-AS1Q17RA5 79 aa12.54□□□□□ -0.4
VRK2-205ENST00000432057 Q6ZRN7 208 aaPredicted RBP12.54□□□□□ -0.4
VRK2-205ENST00000432057 LRCOL1A6NCL2 159 aa12.53□□□□□ -0.4
VRK2-205ENST00000432057 ACYP1P07311 99 aa12.53□□□□□ -0.4
VRK2-205ENST00000432057 IGKV2-24A0A0C4DH68 120 aa12.52□□□□□ -0.41
VRK2-205ENST00000432057 IGLV1-50A0A075B6I6 118 aa12.51□□□□□ -0.41
VRK2-205ENST00000432057 JMJD7-PLA2G4BH0Y9G9 81 aa12.51□□□□□ -0.41
VRK2-205ENST00000432057 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.51□□□□□ -0.41
VRK2-205ENST00000432057 MRPL55Q7Z7F7 128 aaKnown RBP12.51□□□□□ -0.41
VRK2-205ENST00000432057 C16orf90A8MZG2 172 aa12.5□□□□□ -0.41
VRK2-205ENST00000432057 PRYO14603 147 aa12.5□□□□□ -0.41
VRK2-205ENST00000432057 SMCR5Q8TEV8 140 aa12.48□□□□□ -0.41
VRK2-205ENST00000432057 SCGB1A1P11684 91 aa12.48□□□□□ -0.41
VRK2-205ENST00000432057 LAMTOR3Q9UHA4 124 aa12.47□□□□□ -0.41
VRK2-205ENST00000432057 KRTAP4-16G5E9R7 235 aaPredicted RBP12.45□□□□□ -0.42
VRK2-205ENST00000432057 H3BQ85 93 aa12.45□□□□□ -0.42
VRK2-205ENST00000432057 SPRR1AP35321 89 aa12.45□□□□□ -0.42
VRK2-205ENST00000432057 A0A1W2PNN7 141 aa12.44□□□□□ -0.42
VRK2-205ENST00000432057 CHTF8P0CG12 524 aa12.44□□□□□ -0.42
VRK2-205ENST00000432057 ETDCA0A1B0GVM5 59 aa12.43□□□□□ -0.42
VRK2-205ENST00000432057 B5MCH6 92 aa12.43□□□□□ -0.42
VRK2-205ENST00000432057 CCKP06307 115 aa12.43□□□□□ -0.42
VRK2-205ENST00000432057 Q6ZRX8 168 aa12.43□□□□□ -0.42
VRK2-205ENST00000432057 C9orf163Q8N9P6 203 aa12.43□□□□□ -0.42
VRK2-205ENST00000432057 SDIM1Q6ZPB5 146 aa12.42□□□□□ -0.42
VRK2-205ENST00000432057 RBM3P98179 157 aaKnown RBP12.42□□□□□ -0.42
VRK2-205ENST00000432057 Q6ZR54 194 aa12.4□□□□□ -0.42
VRK2-205ENST00000432057 Q9BRP9 147 aa12.4□□□□□ -0.42
VRK2-205ENST00000432057 TGP01266 2768 aa12.4□□□□□ -0.42
VRK2-205ENST00000432057 DNAH2Q9P225 4427 aa12.4□□□□□ -0.42
VRK2-205ENST00000432057 GHRHP01286 108 aa12.4□□□□□ -0.42
VRK2-205ENST00000432057 KMT2AQ03164 3969 aa12.39□□□□□ -0.43
VRK2-205ENST00000432057 LINC00846Q9NV44 126 aa12.39□□□□□ -0.43
VRK2-205ENST00000432057 REG3GQ6UW15 175 aa12.38□□□□□ -0.43
VRK2-205ENST00000432057 LINC00643Q86TS7 51 aa12.38□□□□□ -0.43
VRK2-205ENST00000432057 WWC2-AS2Q96NR7 200 aa12.38□□□□□ -0.43
VRK2-205ENST00000432057 DHRS4-AS1Q9P1J3 65 aa12.38□□□□□ -0.43
VRK2-205ENST00000432057 Q6ZQT0 140 aa12.38□□□□□ -0.43
VRK2-205ENST00000432057 A0A087WTM6 91 aa12.37□□□□□ -0.43
VRK2-205ENST00000432057 LOC110117498A0A087WWA1 95 aa12.36□□□□□ -0.43
VRK2-205ENST00000432057 NDUFV3P56181 108 aaKnown RBP12.36□□□□□ -0.43
VRK2-205ENST00000432057 PKIGQ9Y2B9 76 aa12.35□□□□□ -0.43
VRK2-205ENST00000432057 DEFB105AQ8NG35 78 aa12.34□□□□□ -0.43
VRK2-205ENST00000432057 DSCR8Q96T75 97 aa12.34□□□□□ -0.43
VRK2-205ENST00000432057 HECTD4Q9Y4D8 3996 aa12.34□□□□□ -0.43
VRK2-205ENST00000432057 Q6Q795 121 aa12.34□□□□□ -0.43
VRK2-205ENST00000432057 PHF5AQ7RTV0 110 aaKnown RBP12.34□□□□□ -0.43
VRK2-205ENST00000432057 DNAH17Q9UFH2 4485 aa12.33□□□□□ -0.44
VRK2-205ENST00000432057 DNAH6Q9C0G6 4158 aa12.33□□□□□ -0.44
VRK2-205ENST00000432057 TRBV7-7A0A0K0K1E9 115 aa12.33□□□□□ -0.44
VRK2-205ENST00000432057 PANO1I0J062 215 aa12.33□□□□□ -0.44
VRK2-205ENST00000432057 LY6G6CO95867 125 aa12.32□□□□□ -0.44
VRK2-205ENST00000432057 LINC01547P58512 204 aaPredicted RBP12.32□□□□□ -0.44
VRK2-205ENST00000432057 UBE2BP63146 152 aa12.32□□□□□ -0.44
VRK2-205ENST00000432057 Q8N377 158 aa12.31□□□□□ -0.44
VRK2-205ENST00000432057 ERC2-IT1O76042 136 aa12.31□□□□□ -0.44
VRK2-205ENST00000432057 FUSP35637 526 aaKnown RBP eCLIP12.31□□□□□ -0.44
VRK2-205ENST00000432057 ST20-AS1Q8NBB2 130 aa12.31□□□□□ -0.44
VRK2-205ENST00000432057 TRBV7-4A0A0J9YYF1 115 aa12.3□□□□□ -0.44
VRK2-205ENST00000432057 KRTAP11-1Q8IUC1 163 aa12.3□□□□□ -0.44
VRK2-205ENST00000432057 FAM19A1Q7Z5A9 133 aa12.29□□□□□ -0.44
VRK2-205ENST00000432057 ALMS1Q8TCU4 4167 aa12.29□□□□□ -0.44
VRK2-205ENST00000432057 LINC00474Q9P2X8 69 aa12.28□□□□□ -0.44
VRK2-205ENST00000432057 PDE6GP18545 87 aa12.27□□□□□ -0.44
VRK2-205ENST00000432057 PRLHP81277 87 aa12.27□□□□□ -0.44
VRK2-205ENST00000432057 C1orf134Q5TEV5 83 aa12.27□□□□□ -0.44
VRK2-205ENST00000432057 LINC00476Q8WZB0 136 aa12.27□□□□□ -0.45
VRK2-205ENST00000432057 RTL8CO15255 209 aa12.26□□□□□ -0.45
VRK2-205ENST00000432057 Q6JHZ5 121 aa12.26□□□□□ -0.45
VRK2-205ENST00000432057 C3orf22Q8N5N4 141 aa12.26□□□□□ -0.45
VRK2-205ENST00000432057 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.26□□□□□ -0.45
VRK2-205ENST00000432057 IGLV5-48A0A075B6I7 105 aa12.25□□□□□ -0.45
VRK2-205ENST00000432057 IGKV3D-7A0A0C4DH55 119 aa12.25□□□□□ -0.45
VRK2-205ENST00000432057 SPACA4Q8TDM5 124 aa12.25□□□□□ -0.45
VRK2-205ENST00000432057 C3orf84H3BNL1 204 aa12.24□□□□□ -0.45
VRK2-205ENST00000432057 IMUPQ9GZP8 106 aa12.23□□□□□ -0.45
VRK2-205ENST00000432057 DPH3Q96FX2 82 aa12.23□□□□□ -0.45
VRK2-205ENST00000432057 UBL5Q9BZL1 73 aa12.21□□□□□ -0.46
VRK2-205ENST00000432057 HIGD2AQ9BW72 106 aa12.2□□□□□ -0.46
VRK2-205ENST00000432057 FRAS1Q86XX4 4008 aa12.18□□□□□ -0.46
VRK2-205ENST00000432057 TNP2Q05952 138 aa12.17□□□□□ -0.46
VRK2-205ENST00000432057 IGLV5-52A0A0A0MRZ9 124 aa12.17□□□□□ -0.46
VRK2-205ENST00000432057 ANAPC13Q9BS18 74 aa12.17□□□□□ -0.46
VRK2-205ENST00000432057 FAM236AA0A1B0GUQ0 79 aa12.16□□□□□ -0.46
VRK2-205ENST00000432057 FAM236BA0A1B0GV22 79 aa12.16□□□□□ -0.46
VRK2-205ENST00000432057 EPM2AB3EWF7 344 aa12.16□□□□□ -0.46
VRK2-205ENST00000432057 Q6ZVQ6 151 aa12.15□□□□□ -0.46
VRK2-205ENST00000432057 ATP5EP2Q5VTU8 51 aa12.14□□□□□ -0.47
VRK2-205ENST00000432057 SMIM29Q86T20 159 aa12.14□□□□□ -0.47
VRK2-205ENST00000432057 H0Y9J4 135 aa12.13□□□□□ -0.47
VRK2-205ENST00000432057 UBE2AP49459 152 aa12.13□□□□□ -0.47
VRK2-205ENST00000432057 BCE1O60756 84 aa12.12□□□□□ -0.47
VRK2-205ENST00000432057 C1orf137Q5JT78 98 aa12.11□□□□□ -0.47
VRK2-205ENST00000432057 A0A087WVE0 104 aa12.1□□□□□ -0.47
VRK2-205ENST00000432057 DNAH8Q96JB1 4490 aa12.1□□□□□ -0.47
VRK2-205ENST00000432057 DNAH11Q96DT5 4516 aa12.1□□□□□ -0.47
VRK2-205ENST00000432057 SRRM2Q9UQ35 2752 aaKnown RBP12.09□□□□□ -0.47
VRK2-205ENST00000432057 HYDINQ4G0P3 5121 aa12.09□□□□□ -0.47
VRK2-205ENST00000432057 A0A1W2PNM2 257 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms