RNA–Protein interactions for RNA: ENST00000429574.1

LIN28AP1-201, Transcript of LIN28A pseudogene 1, humanhuman

BASIC

Gene LIN28AP1, Length 405 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AP1-201ENST00000429574 ADAMTSL4-AS1Q5T5F5 129 aa10.73□□□□□ -0.69
LIN28AP1-201ENST00000429574 SOSTDC1Q6X4U4 206 aa10.71□□□□□ -0.69
LIN28AP1-201ENST00000429574 HIST1H2BKO60814 126 aa10.7□□□□□ -0.7
LIN28AP1-201ENST00000429574 HIST1H2BJP06899 126 aa10.7□□□□□ -0.7
LIN28AP1-201ENST00000429574 HIST1H2BOP23527 126 aa10.7□□□□□ -0.7
LIN28AP1-201ENST00000429574 HIST1H2BBP33778 126 aa10.7□□□□□ -0.7
LIN28AP1-201ENST00000429574 HIST1H2BDP58876 126 aa10.7□□□□□ -0.7
LIN28AP1-201ENST00000429574 HIST1H2BCP62807 126 aa10.7□□□□□ -0.7
LIN28AP1-201ENST00000429574 HIST2H2BEQ16778 126 aa10.7□□□□□ -0.7
LIN28AP1-201ENST00000429574 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.7□□□□□ -0.7
LIN28AP1-201ENST00000429574 PET117Q6UWS5 81 aa10.7□□□□□ -0.7
LIN28AP1-201ENST00000429574 HIST1H2BHQ93079 126 aa10.7□□□□□ -0.7
LIN28AP1-201ENST00000429574 HIST1H2BNQ99877 126 aa10.7□□□□□ -0.7
LIN28AP1-201ENST00000429574 HIST1H2BMQ99879 126 aa10.7□□□□□ -0.7
LIN28AP1-201ENST00000429574 SPANXCQ9NY87 97 aa10.7□□□□□ -0.7
LIN28AP1-201ENST00000429574 ZNF815PA8K554 130 aa10.69□□□□□ -0.7
LIN28AP1-201ENST00000429574 LINC00308Q8TCZ7 52 aa10.69□□□□□ -0.7
LIN28AP1-201ENST00000429574 SLC25A20O43772 301 aa10.68□□□□□ -0.7
LIN28AP1-201ENST00000429574 TIMM17BO60830 172 aa10.68□□□□□ -0.7
LIN28AP1-201ENST00000429574 RPS29P62273 56 aaKnown RBP10.68□□□□□ -0.7
LIN28AP1-201ENST00000429574 LINC01545Q5VT33 79 aa10.68□□□□□ -0.7
LIN28AP1-201ENST00000429574 MUC2Q02817 5179 aa10.67□□□□□ -0.7
LIN28AP1-201ENST00000429574 C5orf52A6NGY3 159 aa10.67□□□□□ -0.7
LIN28AP1-201ENST00000429574 SLC25A34Q6PIV7 304 aa10.67□□□□□ -0.7
LIN28AP1-201ENST00000429574 EIF4EBP3O60516 100 aaPredicted RBP10.66□□□□□ -0.7
LIN28AP1-201ENST00000429574 LINC00518Q8N0U6 118 aa10.65□□□□□ -0.7
LIN28AP1-201ENST00000429574 DHRS4-AS1Q9P1J3 65 aa10.65□□□□□ -0.7
LIN28AP1-201ENST00000429574 KRTDAPP60985 99 aa10.64□□□□□ -0.71
LIN28AP1-201ENST00000429574 KRTAP13-3Q3SY46 172 aa10.64□□□□□ -0.71
LIN28AP1-201ENST00000429574 ST20-AS1Q8NBB2 130 aa10.64□□□□□ -0.71
LIN28AP1-201ENST00000429574 SPANXDQ9BXN6 97 aa10.64□□□□□ -0.71
LIN28AP1-201ENST00000429574 C20orf202A1L168 122 aa10.63□□□□□ -0.71
LIN28AP1-201ENST00000429574 SCGB1D4Q6XE38 83 aa10.63□□□□□ -0.71
LIN28AP1-201ENST00000429574 Q8N377 158 aa10.63□□□□□ -0.71
LIN28AP1-201ENST00000429574 COPS9Q8WXC6 57 aa10.63□□□□□ -0.71
LIN28AP1-201ENST00000429574 C3orf79P0CE67 100 aa10.61□□□□□ -0.71
LIN28AP1-201ENST00000429574 LITAFQ99732 161 aa10.61□□□□□ -0.71
LIN28AP1-201ENST00000429574 LAMTOR3Q9UHA4 124 aa10.61□□□□□ -0.71
LIN28AP1-201ENST00000429574 COX7BP24311 80 aa10.6□□□□□ -0.71
LIN28AP1-201ENST00000429574 SEC61BP60468 96 aaKnown RBP10.6□□□□□ -0.71
LIN28AP1-201ENST00000429574 TAL2Q16559 108 aa10.59□□□□□ -0.71
LIN28AP1-201ENST00000429574 TTTY13Q9BZ97 58 aa10.58□□□□□ -0.72
LIN28AP1-201ENST00000429574 C6orf99Q4VX62 202 aa10.57□□□□□ -0.72
LIN28AP1-201ENST00000429574 LIMD2Q9BT23 127 aa10.57□□□□□ -0.72
LIN28AP1-201ENST00000429574 DEFB105AQ8NG35 78 aa10.56□□□□□ -0.72
LIN28AP1-201ENST00000429574 KRTAP9-2Q9BYQ4 174 aa10.56□□□□□ -0.72
LIN28AP1-201ENST00000429574 AKR1D1P51857 326 aa10.55□□□□□ -0.72
LIN28AP1-201ENST00000429574 ASB16-AS1Q495Z4 193 aa10.55□□□□□ -0.72
LIN28AP1-201ENST00000429574 HRCT1Q6UXD1 115 aa10.55□□□□□ -0.72
LIN28AP1-201ENST00000429574 A6NDN8 102 aa10.54□□□□□ -0.72
LIN28AP1-201ENST00000429574 ELOF1P60002 83 aaKnown RBP10.54□□□□□ -0.72
LIN28AP1-201ENST00000429574 LCE2AQ5TA79 106 aaPredicted RBP10.54□□□□□ -0.72
LIN28AP1-201ENST00000429574 IFITM1P13164 125 aa10.53□□□□□ -0.72
LIN28AP1-201ENST00000429574 SPRR1BP22528 89 aa10.53□□□□□ -0.72
LIN28AP1-201ENST00000429574 COA6Q5JTJ3 125 aaKnown RBP10.52□□□□□ -0.73
LIN28AP1-201ENST00000429574 Q6ZVH6 145 aa10.51□□□□□ -0.73
LIN28AP1-201ENST00000429574 TEX49A0A1B0GTD5 131 aa10.5□□□□□ -0.73
LIN28AP1-201ENST00000429574 Q1RN00 199 aa10.5□□□□□ -0.73
LIN28AP1-201ENST00000429574 ATOH7Q8N100 152 aa10.5□□□□□ -0.73
LIN28AP1-201ENST00000429574 TRBV7-6A0A0J9YX20 115 aa10.49□□□□□ -0.73
LIN28AP1-201ENST00000429574 A0A1B0GWB2 263 aa10.49□□□□□ -0.73
LIN28AP1-201ENST00000429574 PRO1933Q9H354 126 aa10.49□□□□□ -0.73
LIN28AP1-201ENST00000429574 MUC17Q685J3 4493 aa10.48□□□□□ -0.73
LIN28AP1-201ENST00000429574 LINC01547P58512 204 aaPredicted RBP10.48□□□□□ -0.73
LIN28AP1-201ENST00000429574 ANKRD39Q53RE8 183 aa10.48□□□□□ -0.73
LIN28AP1-201ENST00000429574 MUSTN1Q8IVN3 82 aa10.47□□□□□ -0.73
LIN28AP1-201ENST00000429574 TRAV13-2A0A0B4J235 113 aa10.45□□□□□ -0.74
LIN28AP1-201ENST00000429574 A4D1N5 150 aa10.45□□□□□ -0.74
LIN28AP1-201ENST00000429574 H7C2G1 150 aa10.45□□□□□ -0.74
LIN28AP1-201ENST00000429574 SNRPEP62304 92 aaKnown RBP10.45□□□□□ -0.74
LIN28AP1-201ENST00000429574 NHP2Q9NX24 153 aaKnown RBP10.45□□□□□ -0.74
LIN28AP1-201ENST00000429574 XP32Q5T750 250 aa10.44□□□□□ -0.74
LIN28AP1-201ENST00000429574 HSBP1L1C9JCN9 74 aa10.43□□□□□ -0.74
LIN28AP1-201ENST00000429574 CD164Q04900 197 aa10.43□□□□□ -0.74
LIN28AP1-201ENST00000429574 PCP2Q8IVA1 136 aa10.43□□□□□ -0.74
LIN28AP1-201ENST00000429574 S100A2P29034 98 aa10.42□□□□□ -0.74
LIN28AP1-201ENST00000429574 FAT4Q6V0I7 4981 aa10.42□□□□□ -0.74
LIN28AP1-201ENST00000429574 VAMP3Q15836 100 aa10.41□□□□□ -0.74
LIN28AP1-201ENST00000429574 C9orf92A6NGG3 77 aa10.39□□□□□ -0.75
LIN28AP1-201ENST00000429574 F8WEM9 126 aa10.37□□□□□ -0.75
LIN28AP1-201ENST00000429574 SMIM11BQ8TCY0 68 aa10.37□□□□□ -0.75
LIN28AP1-201ENST00000429574 IGLV5-48A0A075B6I7 105 aa10.36□□□□□ -0.75
LIN28AP1-201ENST00000429574 SMIM29Q86T20 159 aa10.34□□□□□ -0.75
LIN28AP1-201ENST00000429574 KRTAP4-1Q9BYQ7 146 aa10.34□□□□□ -0.75
LIN28AP1-201ENST00000429574 S100A6P06703 90 aa10.33□□□□□ -0.76
LIN28AP1-201ENST00000429574 TCL1BO95988 128 aa10.32□□□□□ -0.76
LIN28AP1-201ENST00000429574 PCOTHQ58A44 107 aa10.31□□□□□ -0.76
LIN28AP1-201ENST00000429574 Q5XG85 94 aa10.3□□□□□ -0.76
LIN28AP1-201ENST00000429574 HIST3H2BBQ8N257 126 aa10.3□□□□□ -0.76
LIN28AP1-201ENST00000429574 HIST1H2BLQ99880 126 aa10.3□□□□□ -0.76
LIN28AP1-201ENST00000429574 IGLV8-61A0A075B6I0 122 aa10.29□□□□□ -0.76
LIN28AP1-201ENST00000429574 A0A0G2JQZ4 141 aa10.28□□□□□ -0.76
LIN28AP1-201ENST00000429574 KRTAP9-6A0A140TA67 174 aa10.28□□□□□ -0.76
LIN28AP1-201ENST00000429574 hADV29S1A0JD25 119 aa10.28□□□□□ -0.76
LIN28AP1-201ENST00000429574 C1orf195Q5TG92 126 aa10.27□□□□□ -0.77
LIN28AP1-201ENST00000429574 LINC00575Q6W349 94 aa10.26□□□□□ -0.77
LIN28AP1-201ENST00000429574 SCGB1D1O95968 90 aa10.25□□□□□ -0.77
LIN28AP1-201ENST00000429574 HIST1H4GQ99525 98 aa10.25□□□□□ -0.77
LIN28AP1-201ENST00000429574 S100A1P23297 94 aa10.24□□□□□ -0.77
LIN28AP1-201ENST00000429574 Q6ZQY7 126 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms