RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 KIAA0087Q14695 138 aa5.46□□□□□ -1.53
HPS4-205ENST00000429411 SERP2Q8N6R1 65 aa5.46□□□□□ -1.53
HPS4-205ENST00000429411 Q8NDZ9 215 aa5.46□□□□□ -1.54
HPS4-205ENST00000429411 SNURFQ9Y675 71 aa5.46□□□□□ -1.54
HPS4-205ENST00000429411 C3orf84H3BNL1 204 aa5.46□□□□□ -1.54
HPS4-205ENST00000429411 COX17Q14061 63 aa5.46□□□□□ -1.54
HPS4-205ENST00000429411 NANOS2P60321 138 aaKnown RBP5.45□□□□□ -1.54
HPS4-205ENST00000429411 LINC00575Q6W349 94 aa5.45□□□□□ -1.54
HPS4-205ENST00000429411 ZNF73O43830 326 aaPredicted RBP5.45□□□□□ -1.54
HPS4-205ENST00000429411 RPL37AP8A6NKH3 93 aa5.44□□□□□ -1.54
HPS4-205ENST00000429411 M0R2N4 97 aa5.44□□□□□ -1.54
HPS4-205ENST00000429411 LYPD5Q6UWN5 251 aa5.44□□□□□ -1.54
HPS4-205ENST00000429411 Q6ZRU5 148 aa5.44□□□□□ -1.54
HPS4-205ENST00000429411 C6orf48Q9UBA6 75 aa5.44□□□□□ -1.54
HPS4-205ENST00000429411 ZNF706Q9Y5V0 76 aaPredicted RBP5.44□□□□□ -1.54
HPS4-205ENST00000429411 EPM2AB3EWF7 344 aa5.44□□□□□ -1.54
HPS4-205ENST00000429411 NDUFS5O43920 106 aa5.44□□□□□ -1.54
HPS4-205ENST00000429411 Q8N9L7 120 aa5.44□□□□□ -1.54
HPS4-205ENST00000429411 Q8NAQ8 132 aa5.43□□□□□ -1.54
HPS4-205ENST00000429411 DEFB131BA0A096LNP1 70 aa5.43□□□□□ -1.54
HPS4-205ENST00000429411 CYSTM1Q9H1C7 97 aa5.43□□□□□ -1.54
HPS4-205ENST00000429411 KTN1-AS1Q86SY8 53 aa5.43□□□□□ -1.54
HPS4-205ENST00000429411 PRR15Q8IV56 129 aa5.42□□□□□ -1.54
HPS4-205ENST00000429411 SERP1Q9Y6X1 66 aa5.42□□□□□ -1.54
HPS4-205ENST00000429411 A0A0J9YWU9 116 aa5.42□□□□□ -1.54
HPS4-205ENST00000429411 Q6ZVQ6 151 aa5.41□□□□□ -1.54
HPS4-205ENST00000429411 NREPQ16612 68 aa5.41□□□□□ -1.54
HPS4-205ENST00000429411 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.41□□□□□ -1.54
HPS4-205ENST00000429411 UBE2BP63146 152 aa5.4□□□□□ -1.54
HPS4-205ENST00000429411 LINC00612Q8N6U2 182 aa5.4□□□□□ -1.54
HPS4-205ENST00000429411 IGKV2-24A0A0C4DH68 120 aa5.4□□□□□ -1.55
HPS4-205ENST00000429411 A8MUN3 132 aa5.4□□□□□ -1.55
HPS4-205ENST00000429411 LINC01547P58512 204 aaPredicted RBP5.4□□□□□ -1.55
HPS4-205ENST00000429411 KRTAP10-11P60412 298 aa5.4□□□□□ -1.55
HPS4-205ENST00000429411 SYCNQ0VAF6 134 aa5.4□□□□□ -1.55
HPS4-205ENST00000429411 LINC00474Q9P2X8 69 aa5.4□□□□□ -1.55
HPS4-205ENST00000429411 ETDCA0A1B0GVM5 59 aa5.39□□□□□ -1.55
HPS4-205ENST00000429411 MUC7Q8TAX7 377 aa5.39□□□□□ -1.55
HPS4-205ENST00000429411 ESRGQ1W209 222 aa5.39□□□□□ -1.55
HPS4-205ENST00000429411 KRTAP21-3Q3LHN1 58 aa5.39□□□□□ -1.55
HPS4-205ENST00000429411 Q6ZQT0 140 aa5.39□□□□□ -1.55
HPS4-205ENST00000429411 TRAV10A0A0B4J240 114 aa5.38□□□□□ -1.55
HPS4-205ENST00000429411 M0R378 163 aa5.38□□□□□ -1.55
HPS4-205ENST00000429411 ATP5EP2Q5VTU8 51 aa5.38□□□□□ -1.55
HPS4-205ENST00000429411 FP248Q71RG6 208 aaPredicted RBP5.38□□□□□ -1.55
HPS4-205ENST00000429411 PSCAO43653 123 aa5.38□□□□□ -1.55
HPS4-205ENST00000429411 RMI2Q96E14 147 aa5.38□□□□□ -1.55
HPS4-205ENST00000429411 K7EIL1 84 aa5.37□□□□□ -1.55
HPS4-205ENST00000429411 TNP2Q05952 138 aa5.37□□□□□ -1.55
HPS4-205ENST00000429411 TM2D3Q9BRN9 247 aa5.37□□□□□ -1.55
HPS4-205ENST00000429411 BPY2O14599 106 aa5.36□□□□□ -1.55
HPS4-205ENST00000429411 EGFEM1PQ0D2K5 195 aa5.36□□□□□ -1.55
HPS4-205ENST00000429411 IGLV6-57P01721 117 aa5.36□□□□□ -1.55
HPS4-205ENST00000429411 Q6ZRP5 223 aa5.36□□□□□ -1.55
HPS4-205ENST00000429411 OBSCN-AS1Q96MR7 158 aa5.36□□□□□ -1.55
HPS4-205ENST00000429411 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.35□□□□□ -1.55
HPS4-205ENST00000429411 A0A096LNI7 61 aa5.35□□□□□ -1.55
HPS4-205ENST00000429411 MP68P56378 58 aa5.35□□□□□ -1.55
HPS4-205ENST00000429411 F8WEM9 126 aa5.35□□□□□ -1.55
HPS4-205ENST00000429411 SPTSSBQ8NFR3 76 aa5.35□□□□□ -1.55
HPS4-205ENST00000429411 PDE6GP18545 87 aa5.35□□□□□ -1.55
HPS4-205ENST00000429411 FUSP35637 526 aaKnown RBP eCLIP5.35□□□□□ -1.55
HPS4-205ENST00000429411 UBE2DNLQ8IWF7 75 aa5.34□□□□□ -1.55
HPS4-205ENST00000429411 HIGD2AQ9BW72 106 aa5.34□□□□□ -1.55
HPS4-205ENST00000429411 PRR34Q9NV39 138 aa5.34□□□□□ -1.55
HPS4-205ENST00000429411 FAM168BA1KXE4 195 aa5.33□□□□□ -1.56
HPS4-205ENST00000429411 TRBV7-6A0A0J9YX20 115 aa5.33□□□□□ -1.56
HPS4-205ENST00000429411 DEFB116Q30KQ4 102 aa5.33□□□□□ -1.56
HPS4-205ENST00000429411 C7orf33Q8WU49 177 aa5.32□□□□□ -1.56
HPS4-205ENST00000429411 ELOF1P60002 83 aaKnown RBP5.32□□□□□ -1.56
HPS4-205ENST00000429411 C15orf56Q8N910 161 aa5.32□□□□□ -1.56
HPS4-205ENST00000429411 TRAV7A0A075B6U4 112 aa5.32□□□□□ -1.56
HPS4-205ENST00000429411 A0A0G2JQZ4 141 aa5.32□□□□□ -1.56
HPS4-205ENST00000429411 A0A1W2PNN7 141 aa5.32□□□□□ -1.56
HPS4-205ENST00000429411 PRR4Q16378 134 aa5.32□□□□□ -1.56
HPS4-205ENST00000429411 FAM30AQ9NZY2 134 aa5.32□□□□□ -1.56
HPS4-205ENST00000429411 ST20-AS1Q8NBB2 130 aa5.31□□□□□ -1.56
HPS4-205ENST00000429411 LINC00167Q96N53 147 aa5.31□□□□□ -1.56
HPS4-205ENST00000429411 LINC00313P59037 77 aa5.3□□□□□ -1.56
HPS4-205ENST00000429411 CASC10Q5T4H9 136 aa5.3□□□□□ -1.56
HPS4-205ENST00000429411 LRCOL1A6NCL2 159 aa5.3□□□□□ -1.56
HPS4-205ENST00000429411 BCE1O60756 84 aa5.3□□□□□ -1.56
HPS4-205ENST00000429411 ATP5EP56381 51 aaPredicted RBP5.3□□□□□ -1.56
HPS4-205ENST00000429411 LOC110117498A0A087WWA1 95 aa5.29□□□□□ -1.56
HPS4-205ENST00000429411 LCA10Q71F78 164 aa5.29□□□□□ -1.56
HPS4-205ENST00000429411 C1orf137Q5JT78 98 aa5.29□□□□□ -1.56
HPS4-205ENST00000429411 H3BQ85 93 aa5.28□□□□□ -1.56
HPS4-205ENST00000429411 H7BZZ5 65 aa5.28□□□□□ -1.56
HPS4-205ENST00000429411 PRLHP81277 87 aa5.28□□□□□ -1.56
HPS4-205ENST00000429411 LINC00528Q8N1L1 170 aa5.28□□□□□ -1.56
HPS4-205ENST00000429411 COL7A1Q02388 2944 aa5.28□□□□□ -1.56
HPS4-205ENST00000429411 GVQW2A0A096LPI5 108 aaPredicted RBP5.28□□□□□ -1.56
HPS4-205ENST00000429411 H0Y9J4 135 aa5.28□□□□□ -1.56
HPS4-205ENST00000429411 REG3GQ6UW15 175 aa5.28□□□□□ -1.56
HPS4-205ENST00000429411 WFDC13Q8IUB5 93 aa5.28□□□□□ -1.56
HPS4-205ENST00000429411 LINC01556Q5JQF7 62 aa5.27□□□□□ -1.57
HPS4-205ENST00000429411 CXCL6P80162 114 aa5.27□□□□□ -1.57
HPS4-205ENST00000429411 TMEM254Q8TBM7 123 aa5.26□□□□□ -1.57
HPS4-205ENST00000429411 TRBV7-4A0A0J9YYF1 115 aa5.26□□□□□ -1.57
HPS4-205ENST00000429411 KLKP1Q107X0 134 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms