RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 A0A1W2PPR1 153 aa9.68□□□□□ -0.86
PTPN13-203ENST00000427191 COX6B2Q6YFQ2 88 aa9.67□□□□□ -0.86
PTPN13-203ENST00000427191 LINC00304Q8N9R0 145 aa9.67□□□□□ -0.86
PTPN13-203ENST00000427191 DNAH12Q6ZR08 3092 aa9.66□□□□□ -0.86
PTPN13-203ENST00000427191 IGFL1Q6UW32 110 aa9.65□□□□□ -0.86
PTPN13-203ENST00000427191 RBM12B-AS1Q9P1G2 102 aa9.65□□□□□ -0.86
PTPN13-203ENST00000427191 UTRNP46939 3433 aa9.65□□□□□ -0.87
PTPN13-203ENST00000427191 CR1P17927 2039 aa9.63□□□□□ -0.87
PTPN13-203ENST00000427191 H7BZZ5 65 aa9.63□□□□□ -0.87
PTPN13-203ENST00000427191 J3QL48 77 aa9.63□□□□□ -0.87
PTPN13-203ENST00000427191 ZNF861PO60384 105 aa9.63□□□□□ -0.87
PTPN13-203ENST00000427191 TLX1NBP0CAT3 122 aa9.62□□□□□ -0.87
PTPN13-203ENST00000427191 CEP295Q9C0D2 2601 aa9.61□□□□□ -0.87
PTPN13-203ENST00000427191 C9orf129Q5T035 196 aaKnown RBP9.61□□□□□ -0.87
PTPN13-203ENST00000427191 LINC01554Q52M75 96 aa9.6□□□□□ -0.87
PTPN13-203ENST00000427191 C15orf56Q8N910 161 aa9.59□□□□□ -0.87
PTPN13-203ENST00000427191 FAM104AQ969W3 186 aa9.59□□□□□ -0.87
PTPN13-203ENST00000427191 CENPFP49454 3210 aa9.58□□□□□ -0.88
PTPN13-203ENST00000427191 WWC2-AS2Q96NR7 200 aa9.58□□□□□ -0.88
PTPN13-203ENST00000427191 LINC00336Q6ZUF6 198 aa9.57□□□□□ -0.88
PTPN13-203ENST00000427191 PRR34Q9NV39 138 aa9.57□□□□□ -0.88
PTPN13-203ENST00000427191 LINC00483Q53H64 154 aa9.57□□□□□ -0.88
PTPN13-203ENST00000427191 OBSCN-AS1Q96MR7 158 aa9.57□□□□□ -0.88
PTPN13-203ENST00000427191 DSCR10P59022 87 aa9.56□□□□□ -0.88
PTPN13-203ENST00000427191 FAM168BA1KXE4 195 aa9.56□□□□□ -0.88
PTPN13-203ENST00000427191 POLQO75417 2590 aa9.56□□□□□ -0.88
PTPN13-203ENST00000427191 Q1T7F1 81 aa9.56□□□□□ -0.88
PTPN13-203ENST00000427191 PCNTO95613 3336 aa9.56□□□□□ -0.88
PTPN13-203ENST00000427191 KRTAP24-1Q3LI83 254 aa9.55□□□□□ -0.88
PTPN13-203ENST00000427191 USP24Q9UPU5 2620 aa9.53□□□□□ -0.88
PTPN13-203ENST00000427191 Q8N377 158 aa9.53□□□□□ -0.88
PTPN13-203ENST00000427191 IGLV5-37A0A075B6J1 123 aa9.51□□□□□ -0.89
PTPN13-203ENST00000427191 CSNK1G2-AS1Q8NCQ2 148 aa9.49□□□□□ -0.89
PTPN13-203ENST00000427191 FASNP49327 2511 aaKnown RBP9.46□□□□□ -0.89
PTPN13-203ENST00000427191 WIPF1O43516 503 aa9.46□□□□□ -0.9
PTPN13-203ENST00000427191 C5orf42Q9H799 3197 aa9.45□□□□□ -0.9
PTPN13-203ENST00000427191 CNBPP62633 177 aaKnown RBP9.44□□□□□ -0.9
PTPN13-203ENST00000427191 C9orf163Q8N9P6 203 aa9.43□□□□□ -0.9
PTPN13-203ENST00000427191 IGLV7-43P04211 117 aa9.43□□□□□ -0.9
PTPN13-203ENST00000427191 SPRR4Q96PI1 79 aa9.42□□□□□ -0.9
PTPN13-203ENST00000427191 Q75L30 129 aa9.42□□□□□ -0.9
PTPN13-203ENST00000427191 IGLV5-48A0A075B6I7 105 aa9.4□□□□□ -0.9
PTPN13-203ENST00000427191 LINC00612Q8N6U2 182 aa9.4□□□□□ -0.9
PTPN13-203ENST00000427191 C9orf92A6NGG3 77 aa9.39□□□□□ -0.91
PTPN13-203ENST00000427191 A0A087WTM6 91 aa9.38□□□□□ -0.91
PTPN13-203ENST00000427191 A0A0A0MQY5 61 aa9.37□□□□□ -0.91
PTPN13-203ENST00000427191 A0A0D9SG42 100 aa9.37□□□□□ -0.91
PTPN13-203ENST00000427191 IGLV7-46A0A075B6I9 117 aa9.35□□□□□ -0.91
PTPN13-203ENST00000427191 DMAC1Q96GE9 116 aa9.35□□□□□ -0.91
PTPN13-203ENST00000427191 OCR1Q9BZK8 76 aa9.35□□□□□ -0.91
PTPN13-203ENST00000427191 C19orf73Q9NVV2 129 aa9.34□□□□□ -0.91
PTPN13-203ENST00000427191 A0A1B0GU33 70 aa9.34□□□□□ -0.91
PTPN13-203ENST00000427191 HRES1P13985 223 aa9.31□□□□□ -0.92
PTPN13-203ENST00000427191 PSORS1C2Q9UIG4 136 aa9.31□□□□□ -0.92
PTPN13-203ENST00000427191 CAMK2N1Q7Z7J9 78 aa9.3□□□□□ -0.92
PTPN13-203ENST00000427191 A0A1W2PNM2 257 aa9.29□□□□□ -0.92
PTPN13-203ENST00000427191 Q8N1X5 172 aa9.28□□□□□ -0.92
PTPN13-203ENST00000427191 BPTFQ12830 3046 aa9.26□□□□□ -0.93
PTPN13-203ENST00000427191 ZNF575Q86XF7 245 aa9.25□□□□□ -0.93
PTPN13-203ENST00000427191 EIF4EBP3O60516 100 aaPredicted RBP9.25□□□□□ -0.93
PTPN13-203ENST00000427191 FAM229BQ4G0N7 80 aa9.25□□□□□ -0.93
PTPN13-203ENST00000427191 Q6ZSA8 131 aa9.24□□□□□ -0.93
PTPN13-203ENST00000427191 K7EIL1 84 aa9.24□□□□□ -0.93
PTPN13-203ENST00000427191 LINC01558Q9Y6Z2 57 aa9.21□□□□□ -0.94
PTPN13-203ENST00000427191 KRTAP10-11P60412 298 aa9.2□□□□□ -0.94
PTPN13-203ENST00000427191 GIG44P09565 113 aaPredicted RBP9.2□□□□□ -0.94
PTPN13-203ENST00000427191 TNP2Q05952 138 aa9.19□□□□□ -0.94
PTPN13-203ENST00000427191 A0A1W2PNN7 141 aa9.19□□□□□ -0.94
PTPN13-203ENST00000427191 PRR26Q8N8Z3 221 aa9.17□□□□□ -0.94
PTPN13-203ENST00000427191 MGAM2Q2M2H8 2515 aa9.16□□□□□ -0.94
PTPN13-203ENST00000427191 EPG5Q9HCE0 2579 aa9.15□□□□□ -0.94
PTPN13-203ENST00000427191 CSAG1Q6PB30 78 aa9.15□□□□□ -0.94
PTPN13-203ENST00000427191 ASB16-AS1Q495Z4 193 aa9.13□□□□□ -0.95
PTPN13-203ENST00000427191 PRRC2CQ9Y520 2896 aaKnown RBP9.13□□□□□ -0.95
PTPN13-203ENST00000427191 A0A0G2JQZ4 141 aa9.13□□□□□ -0.95
PTPN13-203ENST00000427191 SMR3BP02814 79 aaPredicted RBP9.13□□□□□ -0.95
PTPN13-203ENST00000427191 S4R3F8 94 aa9.12□□□□□ -0.95
PTPN13-203ENST00000427191 ANAPC11Q9NYG5 84 aa9.12□□□□□ -0.95
PTPN13-203ENST00000427191 Q8N9P0 234 aaPredicted RBP9.11□□□□□ -0.95
PTPN13-203ENST00000427191 ZCCHC13Q8WW36 166 aaKnown RBP9.1□□□□□ -0.95
PTPN13-203ENST00000427191 XIRP2A4UGR9 3374 aa9.09□□□□□ -0.96
PTPN13-203ENST00000427191 H3BS24 57 aa9.08□□□□□ -0.96
PTPN13-203ENST00000427191 FLNAP21333 2647 aaKnown RBP9.04□□□□□ -0.96
PTPN13-203ENST00000427191 CEP350Q5VT06 3117 aa9.04□□□□□ -0.96
PTPN13-203ENST00000427191 HECTD1Q9ULT8 2610 aa9.03□□□□□ -0.96
PTPN13-203ENST00000427191 A0A096LNT2 108 aa9.03□□□□□ -0.96
PTPN13-203ENST00000427191 MAST4O15021 2626 aa9.02□□□□□ -0.97
PTPN13-203ENST00000427191 MMP24-AS1A0A0U1RRL7 71 aa9.02□□□□□ -0.97
PTPN13-203ENST00000427191 M0R2T5 61 aa9.01□□□□□ -0.97
PTPN13-203ENST00000427191 DNAH14Q0VDD8 3507 aa9□□□□□ -0.97
PTPN13-203ENST00000427191 Q5XG85 94 aa9□□□□□ -0.97
PTPN13-203ENST00000427191 ROMO1P60602 79 aa9□□□□□ -0.97
PTPN13-203ENST00000427191 Q5VV11 94 aa8.99□□□□□ -0.97
PTPN13-203ENST00000427191 MKI67P46013 3256 aaKnown RBP8.99□□□□□ -0.97
PTPN13-203ENST00000427191 SPINK7P58062 85 aa8.99□□□□□ -0.97
PTPN13-203ENST00000427191 R4GN34 69 aa8.99□□□□□ -0.97
PTPN13-203ENST00000427191 ATRQ13535 2644 aa8.99□□□□□ -0.97
PTPN13-203ENST00000427191 NBEAL1Q6ZS30 2694 aa8.98□□□□□ -0.97
PTPN13-203ENST00000427191 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.98□□□□□ -0.97
PTPN13-203ENST00000427191 KRTAP10-3P60369 221 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms