RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 NKAPP1Q8N9T2 125 aa10.94□□□□□ -0.66
PKP4-205ENST00000426248 Q6ZQT0 140 aa10.93□□□□□ -0.66
PKP4-205ENST00000426248 FAM19A3Q7Z5A8 133 aa10.93□□□□□ -0.66
PKP4-205ENST00000426248 KPRPQ5T749 579 aaPredicted RBP10.93□□□□□ -0.66
PKP4-205ENST00000426248 FAM30AQ9NZY2 134 aa10.92□□□□□ -0.66
PKP4-205ENST00000426248 PLAC8L1A1L4L8 177 aa10.91□□□□□ -0.66
PKP4-205ENST00000426248 C3orf84H3BNL1 204 aa10.91□□□□□ -0.66
PKP4-205ENST00000426248 SPAG11BQ08648 103 aa10.91□□□□□ -0.66
PKP4-205ENST00000426248 Q8NAQ8 132 aa10.9□□□□□ -0.66
PKP4-205ENST00000426248 FBN1P35555 2871 aaKnown RBP10.89□□□□□ -0.67
PKP4-205ENST00000426248 BCE1O60756 84 aa10.87□□□□□ -0.67
PKP4-205ENST00000426248 MUC7Q8TAX7 377 aa10.87□□□□□ -0.67
PKP4-205ENST00000426248 PDE6GP18545 87 aa10.86□□□□□ -0.67
PKP4-205ENST00000426248 UBE2BP63146 152 aa10.86□□□□□ -0.67
PKP4-205ENST00000426248 IGHV3OR16-9A0A0B4J2B5 98 aa10.86□□□□□ -0.67
PKP4-205ENST00000426248 CXCL6P80162 114 aa10.86□□□□□ -0.67
PKP4-205ENST00000426248 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.86□□□□□ -0.67
PKP4-205ENST00000426248 K7EIL1 84 aa10.86□□□□□ -0.67
PKP4-205ENST00000426248 LINC00575Q6W349 94 aa10.86□□□□□ -0.67
PKP4-205ENST00000426248 LINC00959A0A1B0GUT2 108 aa10.85□□□□□ -0.67
PKP4-205ENST00000426248 STAB2Q8WWQ8 2551 aa10.85□□□□□ -0.67
PKP4-205ENST00000426248 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.84□□□□□ -0.67
PKP4-205ENST00000426248 ANK3Q12955 4377 aaKnown RBP10.83□□□□□ -0.67
PKP4-205ENST00000426248 REG3AQ06141 175 aa10.83□□□□□ -0.68
PKP4-205ENST00000426248 TRBV7-4A0A0J9YYF1 115 aa10.83□□□□□ -0.68
PKP4-205ENST00000426248 EGFEM1PQ0D2K5 195 aa10.82□□□□□ -0.68
PKP4-205ENST00000426248 EPM2AB3EWF7 344 aa10.82□□□□□ -0.68
PKP4-205ENST00000426248 CHCHD10Q8WYQ3 142 aaPredicted RBP10.82□□□□□ -0.68
PKP4-205ENST00000426248 DIRC1Q969H9 104 aa10.81□□□□□ -0.68
PKP4-205ENST00000426248 CHKB-CPT1BH3BT56 60 aa10.79□□□□□ -0.68
PKP4-205ENST00000426248 LELP1Q5T871 98 aa10.79□□□□□ -0.68
PKP4-205ENST00000426248 LOC110117498A0A087WWA1 95 aa10.77□□□□□ -0.69
PKP4-205ENST00000426248 C6orf223Q8N319 242 aa10.76□□□□□ -0.69
PKP4-205ENST00000426248 PKD1L1Q8TDX9 2849 aa10.76□□□□□ -0.69
PKP4-205ENST00000426248 COX7BP24311 80 aa10.76□□□□□ -0.69
PKP4-205ENST00000426248 WFDC10BQ8IUB3 73 aa10.76□□□□□ -0.69
PKP4-205ENST00000426248 Q8IZM0 81 aa10.76□□□□□ -0.69
PKP4-205ENST00000426248 A8MUN3 132 aa10.75□□□□□ -0.69
PKP4-205ENST00000426248 CD164L2Q6UWJ8 174 aa10.75□□□□□ -0.69
PKP4-205ENST00000426248 SMIM29Q86T20 159 aa10.74□□□□□ -0.69
PKP4-205ENST00000426248 UNQ6190/PRO20217Q6UXQ8 127 aa10.74□□□□□ -0.69
PKP4-205ENST00000426248 AKAP9Q99996 3911 aa10.74□□□□□ -0.69
PKP4-205ENST00000426248 RPL37AP8A6NKH3 93 aa10.73□□□□□ -0.69
PKP4-205ENST00000426248 PRR15Q8IV56 129 aa10.73□□□□□ -0.69
PKP4-205ENST00000426248 C1orf64Q8NEQ6 169 aa10.73□□□□□ -0.69
PKP4-205ENST00000426248 ETDCA0A1B0GVM5 59 aa10.73□□□□□ -0.69
PKP4-205ENST00000426248 CD164Q04900 197 aa10.73□□□□□ -0.69
PKP4-205ENST00000426248 LINC00167Q96N53 147 aa10.72□□□□□ -0.69
PKP4-205ENST00000426248 TRRAPQ9Y4A5 3859 aa10.71□□□□□ -0.69
PKP4-205ENST00000426248 LINC00612Q8N6U2 182 aa10.7□□□□□ -0.7
PKP4-205ENST00000426248 TRAV22A0A0B4J277 110 aa10.7□□□□□ -0.7
PKP4-205ENST00000426248 ZNF73O43830 326 aaPredicted RBP10.68□□□□□ -0.7
PKP4-205ENST00000426248 NDUFS5O43920 106 aa10.68□□□□□ -0.7
PKP4-205ENST00000426248 A6NED7 52 aa10.68□□□□□ -0.7
PKP4-205ENST00000426248 PRR15LQ9BU68 103 aa10.67□□□□□ -0.7
PKP4-205ENST00000426248 C10orf25Q5T742 122 aa10.67□□□□□ -0.7
PKP4-205ENST00000426248 Q6ZRP5 223 aa10.67□□□□□ -0.7
PKP4-205ENST00000426248 TENM3Q9P273 2699 aa10.66□□□□□ -0.7
PKP4-205ENST00000426248 hDV103S1A0JD37 113 aa10.65□□□□□ -0.7
PKP4-205ENST00000426248 A0A1B0GUV1 79 aa10.65□□□□□ -0.7
PKP4-205ENST00000426248 DEFB116Q30KQ4 102 aa10.65□□□□□ -0.71
PKP4-205ENST00000426248 IGKV4-1P06312 121 aa10.64□□□□□ -0.71
PKP4-205ENST00000426248 H3BQ85 93 aa10.64□□□□□ -0.71
PKP4-205ENST00000426248 COX17Q14061 63 aa10.64□□□□□ -0.71
PKP4-205ENST00000426248 ERC2-IT1O76042 136 aa10.63□□□□□ -0.71
PKP4-205ENST00000426248 B9D2Q9BPU9 175 aa10.62□□□□□ -0.71
PKP4-205ENST00000426248 OCR1Q9BZK8 76 aa10.62□□□□□ -0.71
PKP4-205ENST00000426248 Q8NDZ9 215 aa10.62□□□□□ -0.71
PKP4-205ENST00000426248 WFDC13Q8IUB5 93 aa10.61□□□□□ -0.71
PKP4-205ENST00000426248 MP68P56378 58 aa10.61□□□□□ -0.71
PKP4-205ENST00000426248 UBE2AP49459 152 aa10.61□□□□□ -0.71
PKP4-205ENST00000426248 Q6ZRU5 148 aa10.61□□□□□ -0.71
PKP4-205ENST00000426248 A8MU10 97 aa10.6□□□□□ -0.71
PKP4-205ENST00000426248 CDK2AP2O75956 126 aa10.58□□□□□ -0.72
PKP4-205ENST00000426248 RBM12B-AS1Q9P1G2 102 aa10.57□□□□□ -0.72
PKP4-205ENST00000426248 LINC00208Q96KT6 92 aa10.57□□□□□ -0.72
PKP4-205ENST00000426248 HCG22E2RYF7 251 aa10.56□□□□□ -0.72
PKP4-205ENST00000426248 H3BNG1 76 aa10.56□□□□□ -0.72
PKP4-205ENST00000426248 SYCNQ0VAF6 134 aa10.56□□□□□ -0.72
PKP4-205ENST00000426248 Q1T7F1 81 aa10.55□□□□□ -0.72
PKP4-205ENST00000426248 LINC00588Q9Y4M8 146 aa10.55□□□□□ -0.72
PKP4-205ENST00000426248 NUPR2A6NF83 97 aa10.54□□□□□ -0.72
PKP4-205ENST00000426248 KTN1-AS1Q86SY8 53 aa10.53□□□□□ -0.72
PKP4-205ENST00000426248 H0Y9J4 135 aa10.52□□□□□ -0.72
PKP4-205ENST00000426248 LY6G6CO95867 125 aa10.52□□□□□ -0.73
PKP4-205ENST00000426248 KIAA0087Q14695 138 aa10.52□□□□□ -0.73
PKP4-205ENST00000426248 IGLV6-57P01721 117 aa10.51□□□□□ -0.73
PKP4-205ENST00000426248 LINC01556Q5JQF7 62 aa10.5□□□□□ -0.73
PKP4-205ENST00000426248 SPINK6Q6UWN8 80 aa10.5□□□□□ -0.73
PKP4-205ENST00000426248 ST20-AS1Q8NBB2 130 aa10.5□□□□□ -0.73
PKP4-205ENST00000426248 NDUFB1O75438 58 aa10.49□□□□□ -0.73
PKP4-205ENST00000426248 ELOF1P60002 83 aaKnown RBP10.47□□□□□ -0.73
PKP4-205ENST00000426248 C1orf137Q5JT78 98 aa10.45□□□□□ -0.74
PKP4-205ENST00000426248 K7EQZ3 153 aa10.45□□□□□ -0.74
PKP4-205ENST00000426248 M0R378 163 aa10.43□□□□□ -0.74
PKP4-205ENST00000426248 LIMD2Q9BT23 127 aa10.42□□□□□ -0.74
PKP4-205ENST00000426248 C16orf90A8MZG2 172 aa10.41□□□□□ -0.74
PKP4-205ENST00000426248 C6orf48Q9UBA6 75 aa10.41□□□□□ -0.74
PKP4-205ENST00000426248 C4orf48Q5BLP8 95 aa10.41□□□□□ -0.74
PKP4-205ENST00000426248 Q5VV11 94 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms