RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 B5MCH6 92 aa7.37□□□□□ -1.23
SGCE-203ENST00000425444 C3orf79P0CE67 100 aa7.37□□□□□ -1.23
SGCE-203ENST00000425444 ADAMTSL4-AS1Q5T5F5 129 aa7.37□□□□□ -1.23
SGCE-203ENST00000425444 SOSTDC1Q6X4U4 206 aa7.37□□□□□ -1.23
SGCE-203ENST00000425444 RETNLBQ9BQ08 111 aa7.37□□□□□ -1.23
SGCE-203ENST00000425444 PPDPFQ9H3Y8 114 aa7.37□□□□□ -1.23
SGCE-203ENST00000425444 C20orf202A1L168 122 aa7.36□□□□□ -1.23
SGCE-203ENST00000425444 IGLV6-57P01721 117 aa7.35□□□□□ -1.23
SGCE-203ENST00000425444 COA6Q5JTJ3 125 aaKnown RBP7.35□□□□□ -1.23
SGCE-203ENST00000425444 GAGE2AQ6NT46 116 aa7.35□□□□□ -1.23
SGCE-203ENST00000425444 Q6ZRX8 168 aa7.35□□□□□ -1.23
SGCE-203ENST00000425444 EIF4EBP3O60516 100 aaPredicted RBP7.34□□□□□ -1.23
SGCE-203ENST00000425444 TIMM17BO60830 172 aa7.34□□□□□ -1.23
SGCE-203ENST00000425444 C4orf48Q5BLP8 95 aa7.34□□□□□ -1.23
SGCE-203ENST00000425444 LINC00308Q8TCZ7 52 aa7.34□□□□□ -1.23
SGCE-203ENST00000425444 SPANXCQ9NY87 97 aa7.34□□□□□ -1.23
SGCE-203ENST00000425444 ZNF73O43830 326 aaPredicted RBP7.33□□□□□ -1.24
SGCE-203ENST00000425444 JOSD1Q15040 202 aaPredicted RBP7.33□□□□□ -1.24
SGCE-203ENST00000425444 SPAG11AQ6PDA7 123 aa7.33□□□□□ -1.24
SGCE-203ENST00000425444 OR13C6PQ8NH95 151 aa7.33□□□□□ -1.24
SGCE-203ENST00000425444 LITAFQ99732 161 aa7.33□□□□□ -1.24
SGCE-203ENST00000425444 Q9BRP9 147 aa7.33□□□□□ -1.24
SGCE-203ENST00000425444 TTTY13Q9BZ97 58 aa7.33□□□□□ -1.24
SGCE-203ENST00000425444 CBY1Q9Y3M2 126 aa7.33□□□□□ -1.24
SGCE-203ENST00000425444 ERC2-IT1O76042 136 aa7.32□□□□□ -1.24
SGCE-203ENST00000425444 HINT1P49773 126 aaPredicted RBP7.32□□□□□ -1.24
SGCE-203ENST00000425444 CTAG1AP78358 180 aa7.32□□□□□ -1.24
SGCE-203ENST00000425444 SCGB1D4Q6XE38 83 aa7.32□□□□□ -1.24
SGCE-203ENST00000425444 Q8NBF4 154 aa7.32□□□□□ -1.24
SGCE-203ENST00000425444 IGLV9-49A0A0B4J1Y8 123 aa7.31□□□□□ -1.24
SGCE-203ENST00000425444 LINC00483Q53H64 154 aa7.31□□□□□ -1.24
SGCE-203ENST00000425444 LINC01547P58512 204 aaPredicted RBP7.3□□□□□ -1.24
SGCE-203ENST00000425444 MOBPQ13875 183 aa7.3□□□□□ -1.24
SGCE-203ENST00000425444 ATOH7Q8N100 152 aa7.3□□□□□ -1.24
SGCE-203ENST00000425444 SPANXDQ9BXN6 97 aa7.29□□□□□ -1.24
SGCE-203ENST00000425444 IGLV7-46A0A075B6I9 117 aa7.28□□□□□ -1.24
SGCE-203ENST00000425444 AKR1D1P51857 326 aa7.28□□□□□ -1.24
SGCE-203ENST00000425444 ANKRD39Q53RE8 183 aa7.28□□□□□ -1.24
SGCE-203ENST00000425444 CDIP1Q9H305 208 aa7.28□□□□□ -1.24
SGCE-203ENST00000425444 C9orf153Q5TBE3 101 aa7.27□□□□□ -1.25
SGCE-203ENST00000425444 COPS9Q8WXC6 57 aa7.27□□□□□ -1.25
SGCE-203ENST00000425444 S100A2P29034 98 aa7.26□□□□□ -1.25
SGCE-203ENST00000425444 LINC00518Q8N0U6 118 aa7.26□□□□□ -1.25
SGCE-203ENST00000425444 SPINK1P00995 79 aa7.25□□□□□ -1.25
SGCE-203ENST00000425444 TPRXLQ17RH7 258 aa7.25□□□□□ -1.25
SGCE-203ENST00000425444 ST20-AS1Q8NBB2 130 aa7.25□□□□□ -1.25
SGCE-203ENST00000425444 S100A1P23297 94 aa7.24□□□□□ -1.25
SGCE-203ENST00000425444 SSBP3-AS1Q7Z2R9 100 aa7.24□□□□□ -1.25
SGCE-203ENST00000425444 DHRS4-AS1Q9P1J3 65 aa7.24□□□□□ -1.25
SGCE-203ENST00000425444 IFITM1P13164 125 aa7.23□□□□□ -1.25
SGCE-203ENST00000425444 COX7BP24311 80 aa7.23□□□□□ -1.25
SGCE-203ENST00000425444 C6orf99Q4VX62 202 aa7.23□□□□□ -1.25
SGCE-203ENST00000425444 FP248Q71RG6 208 aaPredicted RBP7.23□□□□□ -1.25
SGCE-203ENST00000425444 PCP2Q8IVA1 136 aa7.23□□□□□ -1.25
SGCE-203ENST00000425444 HIST3H2BBQ8N257 126 aa7.23□□□□□ -1.25
SGCE-203ENST00000425444 A6NDN8 102 aa7.22□□□□□ -1.25
SGCE-203ENST00000425444 C5orf52A6NGY3 159 aa7.22□□□□□ -1.25
SGCE-203ENST00000425444 S100A6P06703 90 aa7.22□□□□□ -1.25
SGCE-203ENST00000425444 SNRPEP62304 92 aaKnown RBP7.22□□□□□ -1.25
SGCE-203ENST00000425444 Q6ZVH6 145 aa7.22□□□□□ -1.25
SGCE-203ENST00000425444 KRTAP9-7A8MTY7 169 aa7.21□□□□□ -1.26
SGCE-203ENST00000425444 HSBP1L1C9JCN9 74 aa7.21□□□□□ -1.26
SGCE-203ENST00000425444 LCE2BO14633 110 aa7.21□□□□□ -1.26
SGCE-203ENST00000425444 ELOF1P60002 83 aaKnown RBP7.21□□□□□ -1.26
SGCE-203ENST00000425444 HIST1H2BLQ99880 126 aa7.21□□□□□ -1.26
SGCE-203ENST00000425444 SLC25A34Q6PIV7 304 aa7.2□□□□□ -1.26
SGCE-203ENST00000425444 MUSTN1Q8IVN3 82 aa7.2□□□□□ -1.26
SGCE-203ENST00000425444 RPS29P62273 56 aaKnown RBP7.19□□□□□ -1.26
SGCE-203ENST00000425444 LAMTOR3Q9UHA4 124 aa7.18□□□□□ -1.26
SGCE-203ENST00000425444 A0A1B0GWB2 263 aa7.17□□□□□ -1.26
SGCE-203ENST00000425444 SPRR1BP22528 89 aa7.17□□□□□ -1.26
SGCE-203ENST00000425444 TAL2Q16559 108 aa7.17□□□□□ -1.26
SGCE-203ENST00000425444 Q8N377 158 aa7.17□□□□□ -1.26
SGCE-203ENST00000425444 DEFB105AQ8NG35 78 aa7.17□□□□□ -1.26
SGCE-203ENST00000425444 TRAV13-2A0A0B4J235 113 aa7.16□□□□□ -1.26
SGCE-203ENST00000425444 TRBV7-6A0A0J9YX20 115 aa7.16□□□□□ -1.26
SGCE-203ENST00000425444 SLC25A20O43772 301 aa7.16□□□□□ -1.26
SGCE-203ENST00000425444 Q1RN00 199 aa7.14□□□□□ -1.27
SGCE-203ENST00000425444 KRTAP13-3Q3SY46 172 aa7.14□□□□□ -1.27
SGCE-203ENST00000425444 HRCT1Q6UXD1 115 aa7.14□□□□□ -1.27
SGCE-203ENST00000425444 TEX49A0A1B0GTD5 131 aa7.13□□□□□ -1.27
SGCE-203ENST00000425444 SCGB1D1O95968 90 aa7.13□□□□□ -1.27
SGCE-203ENST00000425444 A4D1N5 150 aa7.12□□□□□ -1.27
SGCE-203ENST00000425444 SMIM11BQ8TCY0 68 aa7.12□□□□□ -1.27
SGCE-203ENST00000425444 LIMD2Q9BT23 127 aa7.12□□□□□ -1.27
SGCE-203ENST00000425444 NHP2Q9NX24 153 aaKnown RBP7.12□□□□□ -1.27
SGCE-203ENST00000425444 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.1□□□□□ -1.27
SGCE-203ENST00000425444 PRO1933Q9H354 126 aa7.1□□□□□ -1.27
SGCE-203ENST00000425444 VAMP3Q15836 100 aa7.09□□□□□ -1.27
SGCE-203ENST00000425444 HIST1H4GQ99525 98 aa7.08□□□□□ -1.28
SGCE-203ENST00000425444 KRTAP4-1Q9BYQ7 146 aa7.08□□□□□ -1.28
SGCE-203ENST00000425444 IGLV5-48A0A075B6I7 105 aa7.07□□□□□ -1.28
SGCE-203ENST00000425444 SMCPP49901 116 aaPredicted RBP7.07□□□□□ -1.28
SGCE-203ENST00000425444 H7C2G1 150 aa7.06□□□□□ -1.28
SGCE-203ENST00000425444 ASB16-AS1Q495Z4 193 aa7.06□□□□□ -1.28
SGCE-203ENST00000425444 SMIM29Q86T20 159 aa7.06□□□□□ -1.28
SGCE-203ENST00000425444 C12orf57Q99622 126 aa7.06□□□□□ -1.28
SGCE-203ENST00000425444 COX8AP10176 69 aa7.05□□□□□ -1.28
SGCE-203ENST00000425444 CD164Q04900 197 aa7.05□□□□□ -1.28
SGCE-203ENST00000425444 F8WEM9 126 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms