RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 VPS13AQ96RL7 3174 aa2.08□□□□□ -2.08
SDCBPP3-201ENST00000419629 TRIOO75962 3097 aa2.08□□□□□ -2.08
SDCBPP3-201ENST00000419629 TRGV4A0A0C4DH28 118 aa2.08□□□□□ -2.08
SDCBPP3-201ENST00000419629 PRB1P04280 392 aa2.08□□□□□ -2.08
SDCBPP3-201ENST00000419629 COA5Q86WW8 74 aa2.08□□□□□ -2.08
SDCBPP3-201ENST00000419629 RETNLBQ9BQ08 111 aa2.08□□□□□ -2.08
SDCBPP3-201ENST00000419629 ZNF462Q96JM2 2506 aa2.08□□□□□ -2.08
SDCBPP3-201ENST00000419629 ASXL3Q9C0F0 2248 aa2.07□□□□□ -2.08
SDCBPP3-201ENST00000419629 FLNBO75369 2602 aaKnown RBP2.07□□□□□ -2.08
SDCBPP3-201ENST00000419629 FAM186AA6NE01 2351 aa2.07□□□□□ -2.08
SDCBPP3-201ENST00000419629 CHD9Q3L8U1 2897 aa2.07□□□□□ -2.08
SDCBPP3-201ENST00000419629 LINC00959A0A1B0GUT2 108 aa2.07□□□□□ -2.08
SDCBPP3-201ENST00000419629 PLXNB1O43157 2135 aa2.07□□□□□ -2.08
SDCBPP3-201ENST00000419629 HTN1P15515 57 aa2.07□□□□□ -2.08
SDCBPP3-201ENST00000419629 CNBPP62633 177 aaKnown RBP2.07□□□□□ -2.08
SDCBPP3-201ENST00000419629 KRTAP5-7Q6L8G8 165 aa2.07□□□□□ -2.08
SDCBPP3-201ENST00000419629 PLAC8Q9NZF1 115 aa2.07□□□□□ -2.08
SDCBPP3-201ENST00000419629 CHD7Q9P2D1 2997 aa2.07□□□□□ -2.08
SDCBPP3-201ENST00000419629 ABCA1O95477 2261 aa2.07□□□□□ -2.08
SDCBPP3-201ENST00000419629 MYO15AQ9UKN7 3530 aa2.07□□□□□ -2.08
SDCBPP3-201ENST00000419629 ZFHX2Q9C0A1 2572 aaPredicted RBP2.06□□□□□ -2.08
SDCBPP3-201ENST00000419629 ARHGAP32A7KAX9 2087 aa2.06□□□□□ -2.08
SDCBPP3-201ENST00000419629 CADP27708 2225 aa2.06□□□□□ -2.08
SDCBPP3-201ENST00000419629 DNAH14Q0VDD8 3507 aa2.06□□□□□ -2.08
SDCBPP3-201ENST00000419629 IGLV5-48A0A075B6I7 105 aa2.06□□□□□ -2.08
SDCBPP3-201ENST00000419629 TRGV1A0A0A0MS02 117 aa2.06□□□□□ -2.08
SDCBPP3-201ENST00000419629 IGKV3OR2-268A0A0C4DH90 116 aa2.06□□□□□ -2.08
SDCBPP3-201ENST00000419629 H0Y9P7 68 aa2.06□□□□□ -2.08
SDCBPP3-201ENST00000419629 FBXL19-AS1Q494R0 122 aa2.06□□□□□ -2.08
SDCBPP3-201ENST00000419629 ST20-AS1Q8NBB2 130 aa2.06□□□□□ -2.08
SDCBPP3-201ENST00000419629 MED13Q9UHV7 2174 aa2.06□□□□□ -2.08
SDCBPP3-201ENST00000419629 NCOR2Q9Y618 2525 aa2.06□□□□□ -2.08
SDCBPP3-201ENST00000419629 ASPMQ8IZT6 3477 aa2.05□□□□□ -2.08
SDCBPP3-201ENST00000419629 GVQW2A0A096LPI5 108 aaPredicted RBP2.05□□□□□ -2.08
SDCBPP3-201ENST00000419629 PRR3P79522 188 aaKnown RBP2.05□□□□□ -2.08
SDCBPP3-201ENST00000419629 DEFB112Q30KQ8 113 aa2.05□□□□□ -2.08
SDCBPP3-201ENST00000419629 KPRPQ5T749 579 aaPredicted RBP2.05□□□□□ -2.08
SDCBPP3-201ENST00000419629 C9orf163Q8N9P6 203 aa2.05□□□□□ -2.08
SDCBPP3-201ENST00000419629 WDR87Q6ZQQ6 2873 aa2.05□□□□□ -2.08
SDCBPP3-201ENST00000419629 PTPRZ1P23471 2315 aaPredicted RBP2.05□□□□□ -2.08
SDCBPP3-201ENST00000419629 FRYQ5TBA9 3013 aa2.04□□□□□ -2.08
SDCBPP3-201ENST00000419629 IGKV2D-24A0A075B6R9 120 aa2.04□□□□□ -2.08
SDCBPP3-201ENST00000419629 A6NDX4 124 aa2.04□□□□□ -2.08
SDCBPP3-201ENST00000419629 LYNX1G3V0Z9 82 aa2.04□□□□□ -2.08
SDCBPP3-201ENST00000419629 K7EQZ3 153 aa2.04□□□□□ -2.08
SDCBPP3-201ENST00000419629 LYNX1P0DP58 116 aa2.04□□□□□ -2.08
SDCBPP3-201ENST00000419629 DEFB131AP59861 70 aa2.04□□□□□ -2.08
SDCBPP3-201ENST00000419629 SPEGQ15772 3267 aa2.04□□□□□ -2.08
SDCBPP3-201ENST00000419629 RIF1Q5UIP0 2472 aaKnown RBP2.04□□□□□ -2.08
SDCBPP3-201ENST00000419629 SPAG11AQ6PDA7 123 aa2.04□□□□□ -2.08
SDCBPP3-201ENST00000419629 SPRR4Q96PI1 79 aa2.04□□□□□ -2.08
SDCBPP3-201ENST00000419629 ZNF706Q9Y5V0 76 aaPredicted RBP2.04□□□□□ -2.08
SDCBPP3-201ENST00000419629 FRYLO94915 3013 aa2.04□□□□□ -2.08
SDCBPP3-201ENST00000419629 USP9XQ93008 2570 aaPredicted RBP2.04□□□□□ -2.08
SDCBPP3-201ENST00000419629 GVINP1Q7Z2Y8 2422 aa2.03□□□□□ -2.08
SDCBPP3-201ENST00000419629 CACNA1HO95180 2353 aa2.03□□□□□ -2.08
SDCBPP3-201ENST00000419629 KNL1Q8NG31 2342 aa2.03□□□□□ -2.08
SDCBPP3-201ENST00000419629 PLCE1Q9P212 2302 aa2.03□□□□□ -2.08
SDCBPP3-201ENST00000419629 DNAJC13O75165 2243 aa2.03□□□□□ -2.08
SDCBPP3-201ENST00000419629 ZZEF1O43149 2961 aa2.03□□□□□ -2.08
SDCBPP3-201ENST00000419629 NBEAQ8NFP9 2946 aa2.03□□□□□ -2.08
SDCBPP3-201ENST00000419629 IGHV6-1A0A0B4J1U7 121 aa2.03□□□□□ -2.08
SDCBPP3-201ENST00000419629 SPINK7P58062 85 aa2.03□□□□□ -2.08
SDCBPP3-201ENST00000419629 CASC10Q5T4H9 136 aa2.03□□□□□ -2.08
SDCBPP3-201ENST00000419629 TMEM105Q8N8V8 129 aa2.03□□□□□ -2.08
SDCBPP3-201ENST00000419629 Q8NAQ8 132 aa2.03□□□□□ -2.08
SDCBPP3-201ENST00000419629 XAGE1AQ9HD64 81 aa2.03□□□□□ -2.08
SDCBPP3-201ENST00000419629 DMDP11532 3685 aa2.03□□□□□ -2.08
SDCBPP3-201ENST00000419629 TEP1Q99973 2627 aaKnown RBP2.03□□□□□ -2.09
SDCBPP3-201ENST00000419629 DEFB131BA0A096LNP1 70 aa2.02□□□□□ -2.09
SDCBPP3-201ENST00000419629 KRTAP4-16G5E9R7 235 aaPredicted RBP2.02□□□□□ -2.09
SDCBPP3-201ENST00000419629 IGLV1-51P01701 117 aa2.02□□□□□ -2.09
SDCBPP3-201ENST00000419629 CMC4P56277 68 aaPredicted RBP2.02□□□□□ -2.09
SDCBPP3-201ENST00000419629 C1orf137Q5JT78 98 aa2.02□□□□□ -2.09
SDCBPP3-201ENST00000419629 C11orf71Q6IPW1 123 aa2.02□□□□□ -2.09
SDCBPP3-201ENST00000419629 CHCHD10Q8WYQ3 142 aaPredicted RBP2.02□□□□□ -2.09
SDCBPP3-201ENST00000419629 TP53AIP1Q9HCN2 124 aa2.02□□□□□ -2.09
SDCBPP3-201ENST00000419629 ZFYVE26Q68DK2 2539 aa2.02□□□□□ -2.09
SDCBPP3-201ENST00000419629 TECTAO75443 2155 aa2.02□□□□□ -2.09
SDCBPP3-201ENST00000419629 HELZ2Q9BYK8 2649 aaKnown RBP2.02□□□□□ -2.09
SDCBPP3-201ENST00000419629 LOC400499M0QZD8 3231 aa2.01□□□□□ -2.09
SDCBPP3-201ENST00000419629 ANKRD17O75179 2603 aaKnown RBP2.01□□□□□ -2.09
SDCBPP3-201ENST00000419629 A0A1W2PNM2 257 aa2.01□□□□□ -2.09
SDCBPP3-201ENST00000419629 WFDC13Q8IUB5 93 aa2.01□□□□□ -2.09
SDCBPP3-201ENST00000419629 Q8NDZ9 215 aa2.01□□□□□ -2.09
SDCBPP3-201ENST00000419629 CEP250Q9BV73 2442 aa2.01□□□□□ -2.09
SDCBPP3-201ENST00000419629 ICE1Q9Y2F5 2266 aa2□□□□□ -2.09
SDCBPP3-201ENST00000419629 H3BUX3 64 aa2□□□□□ -2.09
SDCBPP3-201ENST00000419629 REG3AQ06141 175 aa2□□□□□ -2.09
SDCBPP3-201ENST00000419629 C1orf134Q5TEV5 83 aa2□□□□□ -2.09
SDCBPP3-201ENST00000419629 SPATA8Q6RVD6 105 aa2□□□□□ -2.09
SDCBPP3-201ENST00000419629 WFDC10BQ8IUB3 73 aa2□□□□□ -2.09
SDCBPP3-201ENST00000419629 NOP10Q9NPE3 64 aaKnown RBP2□□□□□ -2.09
SDCBPP3-201ENST00000419629 CACNA1EQ15878 2313 aa2□□□□□ -2.09
SDCBPP3-201ENST00000419629 PTPRQQ9UMZ3 2332 aa2□□□□□ -2.09
SDCBPP3-201ENST00000419629 SPTBN2O15020 2390 aa1.99□□□□□ -2.09
SDCBPP3-201ENST00000419629 A8MWP4 228 aa1.99□□□□□ -2.09
SDCBPP3-201ENST00000419629 B4DSR2 109 aa1.99□□□□□ -2.09
SDCBPP3-201ENST00000419629 UQCR11O14957 56 aa1.99□□□□□ -2.09
SDCBPP3-201ENST00000419629 ANGP03950 147 aaKnown RBP1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms