RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 SMIM11BQ8TCY0 68 aa10.19□□□□□ -0.78
SHMT2-202ENST00000414700 SND1-IT1Q9HBX3 110 aa10.19□□□□□ -0.78
SHMT2-202ENST00000414700 NDUFC2O95298 119 aa10.18□□□□□ -0.78
SHMT2-202ENST00000414700 LCE6AA0A183 80 aa10.17□□□□□ -0.78
SHMT2-202ENST00000414700 S100A7L2Q5SY68 101 aa10.17□□□□□ -0.78
SHMT2-202ENST00000414700 C10orf25Q5T742 122 aa10.17□□□□□ -0.78
SHMT2-202ENST00000414700 ATP5EP2Q5VTU8 51 aa10.17□□□□□ -0.78
SHMT2-202ENST00000414700 HRCT1Q6UXD1 115 aa10.17□□□□□ -0.78
SHMT2-202ENST00000414700 MIR7-3HGQ8N6C7 128 aa10.17□□□□□ -0.78
SHMT2-202ENST00000414700 RYR2Q92736 4967 aa10.17□□□□□ -0.78
SHMT2-202ENST00000414700 HECTD4Q9Y4D8 3996 aa10.17□□□□□ -0.78
SHMT2-202ENST00000414700 FAT2Q9NYQ8 4349 aa10.16□□□□□ -0.78
SHMT2-202ENST00000414700 C1orf134Q5TEV5 83 aa10.16□□□□□ -0.78
SHMT2-202ENST00000414700 GVQW2A0A096LPI5 108 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-202ENST00000414700 LRCOL1A6NCL2 159 aa10.16□□□□□ -0.78
SHMT2-202ENST00000414700 ZNF561-AS1K7EIQ3 104 aa10.16□□□□□ -0.78
SHMT2-202ENST00000414700 NCR3O14931 201 aa10.16□□□□□ -0.78
SHMT2-202ENST00000414700 CCKP06307 115 aa10.15□□□□□ -0.78
SHMT2-202ENST00000414700 UNQ6190/PRO20217Q6UXQ8 127 aa10.15□□□□□ -0.78
SHMT2-202ENST00000414700 SLPIP03973 132 aa10.14□□□□□ -0.79
SHMT2-202ENST00000414700 GHRHP01286 108 aa10.14□□□□□ -0.79
SHMT2-202ENST00000414700 C9orf116Q5BN46 136 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-202ENST00000414700 ORMDL1Q9P0S3 153 aa10.12□□□□□ -0.79
SHMT2-202ENST00000414700 Q6ZRU5 148 aa10.12□□□□□ -0.79
SHMT2-202ENST00000414700 CAMK2N2Q96S95 79 aa10.12□□□□□ -0.79
SHMT2-202ENST00000414700 RTL8CO15255 209 aa10.11□□□□□ -0.79
SHMT2-202ENST00000414700 LINC00158P58513 81 aa10.11□□□□□ -0.79
SHMT2-202ENST00000414700 C6orf48Q9UBA6 75 aa10.11□□□□□ -0.79
SHMT2-202ENST00000414700 DNAH11Q96DT5 4516 aa10.1□□□□□ -0.79
SHMT2-202ENST00000414700 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.1□□□□□ -0.79
SHMT2-202ENST00000414700 A0A087WTM6 91 aa10.09□□□□□ -0.79
SHMT2-202ENST00000414700 FAM236DA0A1B0GTK5 79 aa10.09□□□□□ -0.79
SHMT2-202ENST00000414700 FAM236CP0DP71 79 aa10.09□□□□□ -0.79
SHMT2-202ENST00000414700 JMJD7-PLA2G4BH0Y9G9 81 aa10.09□□□□□ -0.79
SHMT2-202ENST00000414700 PFN2P35080 140 aa10.09□□□□□ -0.79
SHMT2-202ENST00000414700 TNP2Q05952 138 aa10.09□□□□□ -0.79
SHMT2-202ENST00000414700 LINC00167Q96N53 147 aa10.09□□□□□ -0.79
SHMT2-202ENST00000414700 TRBV10-3A0A0K0K1G6 114 aa10.08□□□□□ -0.8
SHMT2-202ENST00000414700 EPM2AB3EWF7 344 aa10.08□□□□□ -0.8
SHMT2-202ENST00000414700 SYCNQ0VAF6 134 aa10.08□□□□□ -0.8
SHMT2-202ENST00000414700 RYR3Q15413 4870 aa10.07□□□□□ -0.8
SHMT2-202ENST00000414700 TRAV23DV6A0A075B6W5 121 aa10.07□□□□□ -0.8
SHMT2-202ENST00000414700 FUSP35637 526 aaKnown RBP eCLIP10.07□□□□□ -0.8
SHMT2-202ENST00000414700 SERP1Q9Y6X1 66 aa10.07□□□□□ -0.8
SHMT2-202ENST00000414700 PKD1P98161 4303 aa10.07□□□□□ -0.8
SHMT2-202ENST00000414700 Q8N814 137 aa10.06□□□□□ -0.8
SHMT2-202ENST00000414700 BCE1O60756 84 aa10.06□□□□□ -0.8
SHMT2-202ENST00000414700 C20orf197Q8N268 126 aa10.06□□□□□ -0.8
SHMT2-202ENST00000414700 FAM19A1Q7Z5A9 133 aa10.05□□□□□ -0.8
SHMT2-202ENST00000414700 C14orf177Q52M58 125 aa10.04□□□□□ -0.8
SHMT2-202ENST00000414700 UBL5Q9BZL1 73 aa10.03□□□□□ -0.8
SHMT2-202ENST00000414700 DNAH5Q8TE73 4624 aa10.03□□□□□ -0.8
SHMT2-202ENST00000414700 CNBPP62633 177 aaKnown RBP10.02□□□□□ -0.8
SHMT2-202ENST00000414700 PKHD1P08F94 4074 aa10.02□□□□□ -0.81
SHMT2-202ENST00000414700 PRO0628Q9UI54 55 aa10.02□□□□□ -0.81
SHMT2-202ENST00000414700 TRAV7A0A075B6U4 112 aa10.01□□□□□ -0.81
SHMT2-202ENST00000414700 F8WDY8 70 aa10.01□□□□□ -0.81
SHMT2-202ENST00000414700 TMEM256-PLSCR3K7ERE1 68 aa10.01□□□□□ -0.81
SHMT2-202ENST00000414700 H7BZZ5 65 aa10□□□□□ -0.81
SHMT2-202ENST00000414700 COX17Q14061 63 aa10□□□□□ -0.81
SHMT2-202ENST00000414700 Q6ZRP5 223 aa10□□□□□ -0.81
SHMT2-202ENST00000414700 XAGE1AQ9HD64 81 aa9.99□□□□□ -0.81
SHMT2-202ENST00000414700 KRTAP10-2P60368 255 aa9.97□□□□□ -0.81
SHMT2-202ENST00000414700 KLKP1Q107X0 134 aa9.97□□□□□ -0.81
SHMT2-202ENST00000414700 C9orf163Q8N9P6 203 aa9.97□□□□□ -0.81
SHMT2-202ENST00000414700 LINC00336Q6ZUF6 198 aa9.95□□□□□ -0.82
SHMT2-202ENST00000414700 Q8NDZ9 215 aa9.95□□□□□ -0.82
SHMT2-202ENST00000414700 SMIM26A0A096LP01 95 aa9.94□□□□□ -0.82
SHMT2-202ENST00000414700 TLX1NBP0CAT3 122 aa9.94□□□□□ -0.82
SHMT2-202ENST00000414700 A0A096LNI7 61 aa9.93□□□□□ -0.82
SHMT2-202ENST00000414700 LOC110117498A0A087WWA1 95 aa9.92□□□□□ -0.82
SHMT2-202ENST00000414700 IGLV5-52A0A0A0MRZ9 124 aa9.92□□□□□ -0.82
SHMT2-202ENST00000414700 Q6ZQT0 140 aa9.92□□□□□ -0.82
SHMT2-202ENST00000414700 IGKV2-24A0A0C4DH68 120 aa9.92□□□□□ -0.82
SHMT2-202ENST00000414700 CHTF8P0CG12 524 aa9.92□□□□□ -0.82
SHMT2-202ENST00000414700 PRR3P79522 188 aaKnown RBP9.91□□□□□ -0.82
SHMT2-202ENST00000414700 FAM168BA1KXE4 195 aa9.9□□□□□ -0.82
SHMT2-202ENST00000414700 PANO1I0J062 215 aa9.9□□□□□ -0.82
SHMT2-202ENST00000414700 LINC01547P58512 204 aaPredicted RBP9.9□□□□□ -0.82
SHMT2-202ENST00000414700 ATP5EP56381 51 aaPredicted RBP9.89□□□□□ -0.83
SHMT2-202ENST00000414700 RBM3P98179 157 aaKnown RBP9.89□□□□□ -0.83
SHMT2-202ENST00000414700 FP248Q71RG6 208 aaPredicted RBP9.89□□□□□ -0.83
SHMT2-202ENST00000414700 C16orf90A8MZG2 172 aa9.89□□□□□ -0.83
SHMT2-202ENST00000414700 NDUFC1O43677 76 aa9.89□□□□□ -0.83
SHMT2-202ENST00000414700 F8WEM9 126 aa9.88□□□□□ -0.83
SHMT2-202ENST00000414700 SNURFQ9Y675 71 aa9.88□□□□□ -0.83
SHMT2-202ENST00000414700 CXCL6P80162 114 aa9.87□□□□□ -0.83
SHMT2-202ENST00000414700 KRTAP7-1Q8IUC3 87 aa9.87□□□□□ -0.83
SHMT2-202ENST00000414700 DNAH8Q96JB1 4490 aa9.87□□□□□ -0.83
SHMT2-202ENST00000414700 SERTAD4-AS1Q5TG53 156 aa9.87□□□□□ -0.83
SHMT2-202ENST00000414700 Q6ZVQ6 151 aa9.87□□□□□ -0.83
SHMT2-202ENST00000414700 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.87□□□□□ -0.83
SHMT2-202ENST00000414700 LINC00575Q6W349 94 aa9.86□□□□□ -0.83
SHMT2-202ENST00000414700 HAMPP81172 84 aa9.85□□□□□ -0.83
SHMT2-202ENST00000414700 A0A1B0GVY2 172 aa9.85□□□□□ -0.83
SHMT2-202ENST00000414700 VPREB1P12018 145 aa9.85□□□□□ -0.83
SHMT2-202ENST00000414700 C6orf99Q4VX62 202 aa9.85□□□□□ -0.83
SHMT2-202ENST00000414700 LRP1BQ9NZR2 4599 aa9.85□□□□□ -0.83
SHMT2-202ENST00000414700 TRBV7-6A0A0J9YX20 115 aa9.84□□□□□ -0.83
SHMT2-202ENST00000414700 PDE6GP18545 87 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms