RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 HINT1P49773 126 aaPredicted RBP6.55□□□□□ -1.36
RFFL-204ENST00000414419 JOSD1Q15040 202 aaPredicted RBP6.55□□□□□ -1.36
RFFL-204ENST00000414419 SCGB1D4Q6XE38 83 aa6.55□□□□□ -1.36
RFFL-204ENST00000414419 OR13C6PQ8NH95 151 aa6.55□□□□□ -1.36
RFFL-204ENST00000414419 LINC00308Q8TCZ7 52 aa6.55□□□□□ -1.36
RFFL-204ENST00000414419 SPANXCQ9NY87 97 aa6.55□□□□□ -1.36
RFFL-204ENST00000414419 EIF4EBP3O60516 100 aaPredicted RBP6.54□□□□□ -1.36
RFFL-204ENST00000414419 S100A2P29034 98 aa6.54□□□□□ -1.36
RFFL-204ENST00000414419 C3orf22Q8N5N4 141 aa6.54□□□□□ -1.36
RFFL-204ENST00000414419 LITAFQ99732 161 aa6.54□□□□□ -1.36
RFFL-204ENST00000414419 TTTY13Q9BZ97 58 aa6.54□□□□□ -1.36
RFFL-204ENST00000414419 PPDPFQ9H3Y8 114 aa6.54□□□□□ -1.36
RFFL-204ENST00000414419 ZNF73O43830 326 aaPredicted RBP6.53□□□□□ -1.36
RFFL-204ENST00000414419 C4orf48Q5BLP8 95 aa6.53□□□□□ -1.36
RFFL-204ENST00000414419 GAGE2AQ6NT46 116 aa6.53□□□□□ -1.36
RFFL-204ENST00000414419 Q6ZRX8 168 aa6.53□□□□□ -1.36
RFFL-204ENST00000414419 ATOH7Q8N100 152 aa6.53□□□□□ -1.36
RFFL-204ENST00000414419 S100A6P06703 90 aa6.52□□□□□ -1.37
RFFL-204ENST00000414419 COPS9Q8WXC6 57 aa6.52□□□□□ -1.37
RFFL-204ENST00000414419 ANKRD39Q53RE8 183 aa6.51□□□□□ -1.37
RFFL-204ENST00000414419 SPAG11AQ6PDA7 123 aa6.51□□□□□ -1.37
RFFL-204ENST00000414419 SNRPEP62304 92 aaKnown RBP6.5□□□□□ -1.37
RFFL-204ENST00000414419 Q9BRP9 147 aa6.5□□□□□ -1.37
RFFL-204ENST00000414419 SPANXDQ9BXN6 97 aa6.5□□□□□ -1.37
RFFL-204ENST00000414419 ERC2-IT1O76042 136 aa6.49□□□□□ -1.37
RFFL-204ENST00000414419 LINC00483Q53H64 154 aa6.49□□□□□ -1.37
RFFL-204ENST00000414419 HIST3H2BBQ8N257 126 aa6.49□□□□□ -1.37
RFFL-204ENST00000414419 RETNLBQ9BQ08 111 aa6.49□□□□□ -1.37
RFFL-204ENST00000414419 IGLV9-49A0A0B4J1Y8 123 aa6.48□□□□□ -1.37
RFFL-204ENST00000414419 HSBP1L1C9JCN9 74 aa6.48□□□□□ -1.37
RFFL-204ENST00000414419 IFITM1P13164 125 aa6.48□□□□□ -1.37
RFFL-204ENST00000414419 Q6ZVH6 145 aa6.48□□□□□ -1.37
RFFL-204ENST00000414419 Q8NBF4 154 aa6.48□□□□□ -1.37
RFFL-204ENST00000414419 HIST1H2BLQ99880 126 aa6.48□□□□□ -1.37
RFFL-204ENST00000414419 LPAP08519 4548 aa6.48□□□□□ -1.37
RFFL-204ENST00000414419 SMIM6P0DI80 62 aa6.47□□□□□ -1.37
RFFL-204ENST00000414419 PCP2Q8IVA1 136 aa6.47□□□□□ -1.37
RFFL-204ENST00000414419 C12orf57Q99622 126 aa6.47□□□□□ -1.37
RFFL-204ENST00000414419 MOBPQ13875 183 aa6.46□□□□□ -1.38
RFFL-204ENST00000414419 C5orf52A6NGY3 159 aa6.45□□□□□ -1.38
RFFL-204ENST00000414419 PCP4L1A6NKN8 68 aa6.45□□□□□ -1.38
RFFL-204ENST00000414419 SSBP3-AS1Q7Z2R9 100 aa6.45□□□□□ -1.38
RFFL-204ENST00000414419 DHRS4-AS1Q9P1J3 65 aa6.45□□□□□ -1.38
RFFL-204ENST00000414419 IGLV7-46A0A075B6I9 117 aa6.44□□□□□ -1.38
RFFL-204ENST00000414419 A6NDN8 102 aa6.44□□□□□ -1.38
RFFL-204ENST00000414419 SPINK1P00995 79 aa6.44□□□□□ -1.38
RFFL-204ENST00000414419 COX7BP24311 80 aa6.44□□□□□ -1.38
RFFL-204ENST00000414419 C6orf99Q4VX62 202 aa6.44□□□□□ -1.38
RFFL-204ENST00000414419 C9orf153Q5TBE3 101 aa6.44□□□□□ -1.38
RFFL-204ENST00000414419 MUSTN1Q8IVN3 82 aa6.44□□□□□ -1.38
RFFL-204ENST00000414419 SCGB1D1O95968 90 aa6.43□□□□□ -1.38
RFFL-204ENST00000414419 SLC25A34Q6PIV7 304 aa6.43□□□□□ -1.38
RFFL-204ENST00000414419 ST20-AS1Q8NBB2 130 aa6.43□□□□□ -1.38
RFFL-204ENST00000414419 ELOF1P60002 83 aaKnown RBP6.42□□□□□ -1.38
RFFL-204ENST00000414419 TRAV13-2A0A0B4J235 113 aa6.41□□□□□ -1.38
RFFL-204ENST00000414419 TRBV7-6A0A0J9YX20 115 aa6.41□□□□□ -1.38
RFFL-204ENST00000414419 CDIP1Q9H305 208 aa6.41□□□□□ -1.38
RFFL-204ENST00000414419 TAL2Q16559 108 aa6.4□□□□□ -1.38
RFFL-204ENST00000414419 FP248Q71RG6 208 aaPredicted RBP6.4□□□□□ -1.38
RFFL-204ENST00000414419 LAMTOR3Q9UHA4 124 aa6.4□□□□□ -1.38
RFFL-204ENST00000414419 A0A1B0GWB2 263 aa6.39□□□□□ -1.39
RFFL-204ENST00000414419 TPRXLQ17RH7 258 aa6.39□□□□□ -1.39
RFFL-204ENST00000414419 A4D1N5 150 aa6.38□□□□□ -1.39
RFFL-204ENST00000414419 SPRR1BP22528 89 aa6.38□□□□□ -1.39
RFFL-204ENST00000414419 RPS29P62273 56 aaKnown RBP6.38□□□□□ -1.39
RFFL-204ENST00000414419 DEFB105AQ8NG35 78 aa6.38□□□□□ -1.39
RFFL-204ENST00000414419 RNF213Q63HN8 5207 aa6.38□□□□□ -1.39
RFFL-204ENST00000414419 TEX49A0A1B0GTD5 131 aa6.36□□□□□ -1.39
RFFL-204ENST00000414419 SLC25A20O43772 301 aa6.36□□□□□ -1.39
RFFL-204ENST00000414419 VAMP3Q15836 100 aa6.36□□□□□ -1.39
RFFL-204ENST00000414419 SMIM11BQ8TCY0 68 aa6.36□□□□□ -1.39
RFFL-204ENST00000414419 NHP2Q9NX24 153 aaKnown RBP6.36□□□□□ -1.39
RFFL-204ENST00000414419 Q1RN00 199 aa6.35□□□□□ -1.39
RFFL-204ENST00000414419 HIST1H4GQ99525 98 aa6.35□□□□□ -1.39
RFFL-204ENST00000414419 COX8AP10176 69 aa6.34□□□□□ -1.39
RFFL-204ENST00000414419 Q8N377 158 aa6.34□□□□□ -1.39
RFFL-204ENST00000414419 HRCT1Q6UXD1 115 aa6.32□□□□□ -1.4
RFFL-204ENST00000414419 LIMD2Q9BT23 127 aa6.32□□□□□ -1.4
RFFL-204ENST00000414419 PRO1933Q9H354 126 aa6.32□□□□□ -1.4
RFFL-204ENST00000414419 A0A0U1RQV1 116 aa6.31□□□□□ -1.4
RFFL-204ENST00000414419 DLEU1O43261 78 aa6.31□□□□□ -1.4
RFFL-204ENST00000414419 IGLV5-48A0A075B6I7 105 aa6.3□□□□□ -1.4
RFFL-204ENST00000414419 SPATA45Q537H7 98 aa6.3□□□□□ -1.4
RFFL-204ENST00000414419 C14orf144Q96I85 54 aa6.3□□□□□ -1.4
RFFL-204ENST00000414419 VAMP8Q9BV40 100 aa6.3□□□□□ -1.4
RFFL-204ENST00000414419 PAM16Q9Y3D7 125 aa6.3□□□□□ -1.4
RFFL-204ENST00000414419 KRTAP13-3Q3SY46 172 aa6.29□□□□□ -1.4
RFFL-204ENST00000414419 hADV29S1A0JD25 119 aa6.28□□□□□ -1.4
RFFL-204ENST00000414419 H7C2G1 150 aa6.28□□□□□ -1.4
RFFL-204ENST00000414419 LINC01547P58512 204 aaPredicted RBP6.28□□□□□ -1.4
RFFL-204ENST00000414419 CD164Q04900 197 aa6.28□□□□□ -1.4
RFFL-204ENST00000414419 LINC00575Q6W349 94 aa6.28□□□□□ -1.4
RFFL-204ENST00000414419 F8WEM9 126 aa6.27□□□□□ -1.41
RFFL-204ENST00000414419 BVES-AS1Q5T3Y7 98 aa6.27□□□□□ -1.41
RFFL-204ENST00000414419 SMIM29Q86T20 159 aa6.27□□□□□ -1.41
RFFL-204ENST00000414419 RAB37Q96AX2 223 aa6.27□□□□□ -1.41
RFFL-204ENST00000414419 HIGD1BQ9P298 99 aa6.26□□□□□ -1.41
RFFL-204ENST00000414419 PYY3Q5JQD4 70 aa6.25□□□□□ -1.41
RFFL-204ENST00000414419 Q6ZQY7 126 aa6.25□□□□□ -1.41
RFFL-204ENST00000414419 SNCGO76070 127 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 438.8 ms