RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 GAGE2AQ6NT46 116 aa15.16■□□□□ 0.02
VEGFA-207ENST00000413642 TRAV23DV6A0A075B6W5 121 aa15.15■□□□□ 0.02
VEGFA-207ENST00000413642 Q6ZRX8 168 aa15.15■□□□□ 0.02
VEGFA-207ENST00000413642 TIMM17BO60830 172 aa15.14■□□□□ 0.01
VEGFA-207ENST00000413642 LINC00483Q53H64 154 aa15.13■□□□□ 0.01
VEGFA-207ENST00000413642 ANKRD39Q53RE8 183 aa15.12■□□□□ 0.01
VEGFA-207ENST00000413642 ATOH7Q8N100 152 aa15.12■□□□□ 0.01
VEGFA-207ENST00000413642 ZNF73O43830 326 aaPredicted RBP15.11■□□□□ 0.01
VEGFA-207ENST00000413642 Q8NBF4 154 aa15.11■□□□□ 0.01
VEGFA-207ENST00000413642 SPANXCQ9NY87 97 aa15.1■□□□□ 0.01
VEGFA-207ENST00000413642 OR13C6PQ8NH95 151 aa15.08■□□□□ 0
VEGFA-207ENST00000413642 C20orf202A1L168 122 aa15.07■□□□□ 0
VEGFA-207ENST00000413642 SPAG11AQ6PDA7 123 aa15.06■□□□□ 0
VEGFA-207ENST00000413642 IGLV9-49A0A0B4J1Y8 123 aa15.04■□□□□ -0
VEGFA-207ENST00000413642 CTAG1AP78358 180 aa15.04■□□□□ -0
VEGFA-207ENST00000413642 IGLV7-46A0A075B6I9 117 aa15.03■□□□□ -0
VEGFA-207ENST00000413642 JOSD1Q15040 202 aaPredicted RBP15.03■□□□□ -0
VEGFA-207ENST00000413642 C4orf48Q5BLP8 95 aa15.03■□□□□ -0
VEGFA-207ENST00000413642 ST20-AS1Q8NBB2 130 aa15.03■□□□□ -0
VEGFA-207ENST00000413642 MOBPQ13875 183 aa15.02■□□□□ -0
VEGFA-207ENST00000413642 SCGB1D4Q6XE38 83 aa15.02■□□□□ -0
VEGFA-207ENST00000413642 PCP2Q8IVA1 136 aa15.01□□□□□ -0.01
VEGFA-207ENST00000413642 SPANXDQ9BXN6 97 aa14.99□□□□□ -0.01
VEGFA-207ENST00000413642 HIST3H2BBQ8N257 126 aa14.98□□□□□ -0.01
VEGFA-207ENST00000413642 HINT1P49773 126 aaPredicted RBP14.96□□□□□ -0.01
VEGFA-207ENST00000413642 CBY1Q9Y3M2 126 aa14.96□□□□□ -0.01
VEGFA-207ENST00000413642 S100A1P23297 94 aa14.95□□□□□ -0.02
VEGFA-207ENST00000413642 LINC00518Q8N0U6 118 aa14.95□□□□□ -0.02
VEGFA-207ENST00000413642 HIST1H2BLQ99880 126 aa14.95□□□□□ -0.02
VEGFA-207ENST00000413642 SSBP3-AS1Q7Z2R9 100 aa14.94□□□□□ -0.02
VEGFA-207ENST00000413642 TPRXLQ17RH7 258 aa14.93□□□□□ -0.02
VEGFA-207ENST00000413642 SPINK1P00995 79 aa14.92□□□□□ -0.02
VEGFA-207ENST00000413642 C6orf99Q4VX62 202 aa14.92□□□□□ -0.02
VEGFA-207ENST00000413642 MUSTN1Q8IVN3 82 aa14.92□□□□□ -0.02
VEGFA-207ENST00000413642 CDIP1Q9H305 208 aa14.91□□□□□ -0.02
VEGFA-207ENST00000413642 S100A2P29034 98 aa14.9□□□□□ -0.02
VEGFA-207ENST00000413642 IFITM1P13164 125 aa14.89□□□□□ -0.03
VEGFA-207ENST00000413642 COX7BP24311 80 aa14.89□□□□□ -0.03
VEGFA-207ENST00000413642 C9orf153Q5TBE3 101 aa14.89□□□□□ -0.03
VEGFA-207ENST00000413642 AKR1D1P51857 326 aa14.88□□□□□ -0.03
VEGFA-207ENST00000413642 ELOF1P60002 83 aaKnown RBP14.87□□□□□ -0.03
VEGFA-207ENST00000413642 DHRS4-AS1Q9P1J3 65 aa14.87□□□□□ -0.03
VEGFA-207ENST00000413642 A6NDN8 102 aa14.85□□□□□ -0.03
VEGFA-207ENST00000413642 C5orf52A6NGY3 159 aa14.85□□□□□ -0.03
VEGFA-207ENST00000413642 SNRPEP62304 92 aaKnown RBP14.85□□□□□ -0.03
VEGFA-207ENST00000413642 Q6ZVH6 145 aa14.85□□□□□ -0.03
VEGFA-207ENST00000413642 FP248Q71RG6 208 aaPredicted RBP14.85□□□□□ -0.03
VEGFA-207ENST00000413642 SPRR1BP22528 89 aa14.84□□□□□ -0.03
VEGFA-207ENST00000413642 MUC2Q02817 5179 aa14.84□□□□□ -0.03
VEGFA-207ENST00000413642 COPS9Q8WXC6 57 aa14.83□□□□□ -0.04
VEGFA-207ENST00000413642 Q8N377 158 aa14.82□□□□□ -0.04
VEGFA-207ENST00000413642 S100A6P06703 90 aa14.81□□□□□ -0.04
VEGFA-207ENST00000413642 RPS29P62273 56 aaKnown RBP14.79□□□□□ -0.04
VEGFA-207ENST00000413642 DEFB105AQ8NG35 78 aa14.79□□□□□ -0.04
VEGFA-207ENST00000413642 KRTAP13-3Q3SY46 172 aa14.78□□□□□ -0.04
VEGFA-207ENST00000413642 TRBV7-6A0A0J9YX20 115 aa14.76□□□□□ -0.05
VEGFA-207ENST00000413642 HSBP1L1C9JCN9 74 aa14.76□□□□□ -0.05
VEGFA-207ENST00000413642 TAL2Q16559 108 aa14.75□□□□□ -0.05
VEGFA-207ENST00000413642 SLC25A20O43772 301 aa14.74□□□□□ -0.05
VEGFA-207ENST00000413642 LAMTOR3Q9UHA4 124 aa14.74□□□□□ -0.05
VEGFA-207ENST00000413642 MUC17Q685J3 4493 aa14.73□□□□□ -0.05
VEGFA-207ENST00000413642 A0A1B0GWB2 263 aa14.73□□□□□ -0.05
VEGFA-207ENST00000413642 Q1RN00 199 aa14.73□□□□□ -0.05
VEGFA-207ENST00000413642 SLC25A34Q6PIV7 304 aa14.73□□□□□ -0.05
VEGFA-207ENST00000413642 HRCT1Q6UXD1 115 aa14.73□□□□□ -0.05
VEGFA-207ENST00000413642 SMIM11BQ8TCY0 68 aa14.73□□□□□ -0.05
VEGFA-207ENST00000413642 TRAV13-2A0A0B4J235 113 aa14.71□□□□□ -0.05
VEGFA-207ENST00000413642 SCGB1D1O95968 90 aa14.7□□□□□ -0.06
VEGFA-207ENST00000413642 TEX49A0A1B0GTD5 131 aa14.69□□□□□ -0.06
VEGFA-207ENST00000413642 LINC01547P58512 204 aaPredicted RBP14.69□□□□□ -0.06
VEGFA-207ENST00000413642 A4D1N5 150 aa14.67□□□□□ -0.06
VEGFA-207ENST00000413642 SMIM29Q86T20 159 aa14.67□□□□□ -0.06
VEGFA-207ENST00000413642 IGLV5-48A0A075B6I7 105 aa14.63□□□□□ -0.07
VEGFA-207ENST00000413642 A0A0G2JQZ4 141 aa14.61□□□□□ -0.07
VEGFA-207ENST00000413642 A0A0U1RQV1 116 aa14.6□□□□□ -0.07
VEGFA-207ENST00000413642 PRO1933Q9H354 126 aa14.6□□□□□ -0.07
VEGFA-207ENST00000413642 C12orf57Q99622 126 aa14.59□□□□□ -0.07
VEGFA-207ENST00000413642 COX8AP10176 69 aa14.58□□□□□ -0.08
VEGFA-207ENST00000413642 HIST1H4GQ99525 98 aa14.56□□□□□ -0.08
VEGFA-207ENST00000413642 LIMD2Q9BT23 127 aa14.56□□□□□ -0.08
VEGFA-207ENST00000413642 NHP2Q9NX24 153 aaKnown RBP14.56□□□□□ -0.08
VEGFA-207ENST00000413642 H7C2G1 150 aa14.55□□□□□ -0.08
VEGFA-207ENST00000413642 ASB16-AS1Q495Z4 193 aa14.55□□□□□ -0.08
VEGFA-207ENST00000413642 FAT4Q6V0I7 4981 aa14.54□□□□□ -0.08
VEGFA-207ENST00000413642 VAMP3Q15836 100 aa14.54□□□□□ -0.08
VEGFA-207ENST00000413642 LINC00575Q6W349 94 aa14.54□□□□□ -0.08
VEGFA-207ENST00000413642 CD164Q04900 197 aa14.53□□□□□ -0.08
VEGFA-207ENST00000413642 C14orf144Q96I85 54 aa14.53□□□□□ -0.08
VEGFA-207ENST00000413642 DLEU1O43261 78 aa14.5□□□□□ -0.09
VEGFA-207ENST00000413642 XP32Q5T750 250 aa14.5□□□□□ -0.09
VEGFA-207ENST00000413642 KRTAP4-1Q9BYQ7 146 aa14.5□□□□□ -0.09
VEGFA-207ENST00000413642 PAM16Q9Y3D7 125 aa14.49□□□□□ -0.09
VEGFA-207ENST00000413642 hADV29S1A0JD25 119 aa14.47□□□□□ -0.09
VEGFA-207ENST00000413642 SPATA45Q537H7 98 aa14.47□□□□□ -0.09
VEGFA-207ENST00000413642 Q6ZQY7 126 aa14.47□□□□□ -0.09
VEGFA-207ENST00000413642 SEC61BP60468 96 aaKnown RBP14.46□□□□□ -0.09
VEGFA-207ENST00000413642 LCE2AQ5TA79 106 aaPredicted RBP14.45□□□□□ -0.1
VEGFA-207ENST00000413642 C9orf92A6NGG3 77 aa14.42□□□□□ -0.1
VEGFA-207ENST00000413642 CFC1BP0CG36 223 aa14.41□□□□□ -0.1
VEGFA-207ENST00000413642 CFC1P0CG37 223 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms