RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 LRRC7Q96NW7 1537 aa-0.46□□□□□ -2.48
RNU2-28P-201ENST00000410457 PVALEFA0A1B0GWK0 134 aa-0.46□□□□□ -2.48
RNU2-28P-201ENST00000410457 K7EP34 96 aa-0.46□□□□□ -2.48
RNU2-28P-201ENST00000410457 MUC2Q02817 5179 aa-0.46□□□□□ -2.48
RNU2-28P-201ENST00000410457 RGPD1P0DJD0 1748 aa-0.47□□□□□ -2.48
RNU2-28P-201ENST00000410457 SNRPFP62306 86 aaKnown RBP-0.47□□□□□ -2.48
RNU2-28P-201ENST00000410457 RPL38P63173 70 aaKnown RBP-0.47□□□□□ -2.48
RNU2-28P-201ENST00000410457 COX6B2Q6YFQ2 88 aa-0.47□□□□□ -2.48
RNU2-28P-201ENST00000410457 WFDC13Q8IUB5 93 aa-0.47□□□□□ -2.48
RNU2-28P-201ENST00000410457 S100A16Q96FQ6 103 aaKnown RBP-0.47□□□□□ -2.48
RNU2-28P-201ENST00000410457 GAFA1Q96PS6 74 aa-0.47□□□□□ -2.48
RNU2-28P-201ENST00000410457 SETD2Q9BYW2 2564 aaPredicted RBP-0.47□□□□□ -2.48
RNU2-28P-201ENST00000410457 PREX1Q8TCU6 1659 aa-0.47□□□□□ -2.48
RNU2-28P-201ENST00000410457 LRRC9Q6ZRR7 1453 aa-0.48□□□□□ -2.49
RNU2-28P-201ENST00000410457 MYMXA0A1B0GTQ4 84 aa-0.48□□□□□ -2.49
RNU2-28P-201ENST00000410457 RGPD8O14715 1765 aaPredicted RBP-0.48□□□□□ -2.49
RNU2-28P-201ENST00000410457 RGPD5Q99666 1765 aa-0.48□□□□□ -2.49
RNU2-28P-201ENST00000410457 RABAC1Q9UI14 185 aa-0.49□□□□□ -2.49
RNU2-28P-201ENST00000410457 LINC00643Q86TS7 51 aa-0.5□□□□□ -2.49
RNU2-28P-201ENST00000410457 HECTD1Q9ULT8 2610 aa-0.5□□□□□ -2.49
RNU2-28P-201ENST00000410457 TGP01266 2768 aa-0.5□□□□□ -2.49
RNU2-28P-201ENST00000410457 CREBBPQ92793 2442 aa-0.5□□□□□ -2.49
RNU2-28P-201ENST00000410457 AKAP13Q12802 2813 aa-0.51□□□□□ -2.49
RNU2-28P-201ENST00000410457 SUPT6HQ7KZ85 1726 aaKnown RBP-0.52□□□□□ -2.49
RNU2-28P-201ENST00000410457 PTPN23Q9H3S7 1636 aa-0.53□□□□□ -2.49
RNU2-28P-201ENST00000410457 TRAV21A0A0B4J279 112 aa-0.53□□□□□ -2.49
RNU2-28P-201ENST00000410457 SPRR2AP35326 72 aa-0.53□□□□□ -2.49
RNU2-28P-201ENST00000410457 PPLO60437 1756 aa-0.53□□□□□ -2.49
RNU2-28P-201ENST00000410457 SVEP1Q4LDE5 3571 aa-0.53□□□□□ -2.5
RNU2-28P-201ENST00000410457 ACYP1P07311 99 aa-0.54□□□□□ -2.5
RNU2-28P-201ENST00000410457 TMEM131LA2VDJ0 1609 aa-0.54□□□□□ -2.5
RNU2-28P-201ENST00000410457 TIAM2Q8IVF5 1701 aa-0.55□□□□□ -2.5
RNU2-28P-201ENST00000410457 CICQ96RK0 1608 aaPredicted RBP-0.55□□□□□ -2.5
RNU2-28P-201ENST00000410457 CEBPZOSA8MTT3 80 aa-0.55□□□□□ -2.5
RNU2-28P-201ENST00000410457 ADAMTS12P58397 1594 aa-0.55□□□□□ -2.5
RNU2-28P-201ENST00000410457 SPG11Q96JI7 2443 aa-0.56□□□□□ -2.5
RNU2-28P-201ENST00000410457 PRRC2CQ9Y520 2896 aaKnown RBP-0.56□□□□□ -2.5
RNU2-28P-201ENST00000410457 NDUFB1O75438 58 aa-0.56□□□□□ -2.5
RNU2-28P-201ENST00000410457 NDUFA3O95167 84 aa-0.56□□□□□ -2.5
RNU2-28P-201ENST00000410457 KRTAP19-7Q3SYF9 63 aa-0.56□□□□□ -2.5
RNU2-28P-201ENST00000410457 PKHD1P08F94 4074 aa-0.56□□□□□ -2.5
RNU2-28P-201ENST00000410457 KIF14Q15058 1648 aa-0.56□□□□□ -2.5
RNU2-28P-201ENST00000410457 MAP3K4Q9Y6R4 1608 aa-0.56□□□□□ -2.5
RNU2-28P-201ENST00000410457 LTN1O94822 1766 aa-0.57□□□□□ -2.5
RNU2-28P-201ENST00000410457 POLR1AO95602 1720 aaPredicted RBP-0.57□□□□□ -2.5
RNU2-28P-201ENST00000410457 KRTAP6-2Q3LI66 62 aa-0.57□□□□□ -2.5
RNU2-28P-201ENST00000410457 WFDC9Q8NEX5 89 aa-0.57□□□□□ -2.5
RNU2-28P-201ENST00000410457 USP32Q8NFA0 1604 aa-0.57□□□□□ -2.5
RNU2-28P-201ENST00000410457 SPTBN4Q9H254 2564 aa-0.57□□□□□ -2.5
RNU2-28P-201ENST00000410457 NF1P21359 2839 aa-0.58□□□□□ -2.5
RNU2-28P-201ENST00000410457 EPG5Q9HCE0 2579 aa-0.58□□□□□ -2.5
RNU2-28P-201ENST00000410457 FLGP20930 4061 aaPredicted RBP-0.59□□□□□ -2.5
RNU2-28P-201ENST00000410457 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.59□□□□□ -2.5
RNU2-28P-201ENST00000410457 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.59□□□□□ -2.5
RNU2-28P-201ENST00000410457 UACAQ9BZF9 1416 aa-0.6□□□□□ -2.51
RNU2-28P-201ENST00000410457 GNG2P59768 71 aa-0.6□□□□□ -2.51
RNU2-28P-201ENST00000410457 TDRG1Q3Y452 100 aa-0.6□□□□□ -2.51
RNU2-28P-201ENST00000410457 URB2Q14146 1524 aaKnown RBP-0.6□□□□□ -2.51
RNU2-28P-201ENST00000410457 TNRC18O15417 2968 aaPredicted RBP-0.6□□□□□ -2.51
RNU2-28P-201ENST00000410457 SONP18583 2426 aaKnown RBP-0.61□□□□□ -2.51
RNU2-28P-201ENST00000410457 KANTRA0A1W2PQU2 76 aa-0.61□□□□□ -2.51
RNU2-28P-201ENST00000410457 H0YGG7 62 aa-0.61□□□□□ -2.51
RNU2-28P-201ENST00000410457 C4AP0C0L4 1744 aa-0.61□□□□□ -2.51
RNU2-28P-201ENST00000410457 C4BP0C0L5 1744 aa-0.61□□□□□ -2.51
RNU2-28P-201ENST00000410457 MXRA5Q9NR99 2828 aa-0.62□□□□□ -2.51
RNU2-28P-201ENST00000410457 DOT1LQ8TEK3 1739 aa-0.63□□□□□ -2.51
RNU2-28P-201ENST00000410457 NCOA2Q15596 1464 aa-0.63□□□□□ -2.51
RNU2-28P-201ENST00000410457 NWD1Q149M9 1564 aa-0.63□□□□□ -2.51
RNU2-28P-201ENST00000410457 SPRR2EP22531 72 aa-0.64□□□□□ -2.51
RNU2-28P-201ENST00000410457 C3orf79P0CE67 100 aa-0.65□□□□□ -2.51
RNU2-28P-201ENST00000410457 MAGI3Q5TCQ9 1506 aa-0.65□□□□□ -2.51
RNU2-28P-201ENST00000410457 ZNF831Q5JPB2 1677 aa-0.65□□□□□ -2.51
RNU2-28P-201ENST00000410457 NESP48681 1621 aa-0.66□□□□□ -2.51
RNU2-28P-201ENST00000410457 DSPP15924 2871 aaKnown RBP-0.67□□□□□ -2.52
RNU2-28P-201ENST00000410457 PRO3102Q9H379 93 aa-0.67□□□□□ -2.52
RNU2-28P-201ENST00000410457 ZZEF1O43149 2961 aa-0.68□□□□□ -2.52
RNU2-28P-201ENST00000410457 CCDC88BA6NC98 1476 aa-0.68□□□□□ -2.52
RNU2-28P-201ENST00000410457 ARFGEF2Q9Y6D5 1785 aa-0.69□□□□□ -2.52
RNU2-28P-201ENST00000410457 UMAD1C9J7I0 102 aa-0.69□□□□□ -2.52
RNU2-28P-201ENST00000410457 IFI27P40305 119 aaPredicted RBP-0.69□□□□□ -2.52
RNU2-28P-201ENST00000410457 PIK3C2BO00750 1634 aa-0.69□□□□□ -2.52
RNU2-28P-201ENST00000410457 SMARCA2P51531 1590 aa-0.7□□□□□ -2.52
RNU2-28P-201ENST00000410457 RB1CC1Q8TDY2 1594 aa-0.7□□□□□ -2.52
RNU2-28P-201ENST00000410457 MED14O60244 1454 aa-0.7□□□□□ -2.52
RNU2-28P-201ENST00000410457 WIZO95785 1651 aa-0.7□□□□□ -2.52
RNU2-28P-201ENST00000410457 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.7□□□□□ -2.523e-7■■■■■ 59
RNU2-28P-201ENST00000410457 PLXNC1O60486 1568 aa-0.7□□□□□ -2.52
RNU2-28P-201ENST00000410457 DIP2BQ9P265 1576 aa-0.7□□□□□ -2.52
RNU2-28P-201ENST00000410457 PKD1P98161 4303 aa-0.71□□□□□ -2.52
RNU2-28P-201ENST00000410457 LCE6AA0A183 80 aa-0.71□□□□□ -2.52
RNU2-28P-201ENST00000410457 IFI6P09912 130 aa-0.71□□□□□ -2.52
RNU2-28P-201ENST00000410457 LINC00158P58513 81 aa-0.71□□□□□ -2.52
RNU2-28P-201ENST00000410457 ATP5EP2Q5VTU8 51 aa-0.71□□□□□ -2.52
RNU2-28P-201ENST00000410457 ST20Q9HBF5 79 aa-0.71□□□□□ -2.52
RNU2-28P-201ENST00000410457 HIVEP1P15822 2718 aa-0.72□□□□□ -2.52
RNU2-28P-201ENST00000410457 FASNP49327 2511 aaKnown RBP-0.72□□□□□ -2.52
RNU2-28P-201ENST00000410457 DEFB121Q5J5C9 76 aa-0.72□□□□□ -2.52
RNU2-28P-201ENST00000410457 TACC2O95359 2948 aa-0.73□□□□□ -2.53
RNU2-28P-201ENST00000410457 ADIRFQ15847 76 aa-0.73□□□□□ -2.53
RNU2-28P-201ENST00000410457 S100A13Q99584 98 aa-0.73□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms