RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 C15orf56Q8N910 161 aa8.53□□□□□ -1.04
RNF43-201ENST00000407977 F8P00451 2351 aa8.53□□□□□ -1.04
RNF43-201ENST00000407977 MTORP42345 2549 aa8.51□□□□□ -1.05
RNF43-201ENST00000407977 C9orf129Q5T035 196 aaKnown RBP8.51□□□□□ -1.05
RNF43-201ENST00000407977 Q1T7F1 81 aa8.5□□□□□ -1.05
RNF43-201ENST00000407977 IGLV5-48A0A075B6I7 105 aa8.48□□□□□ -1.05
RNF43-201ENST00000407977 ZNF861PO60384 105 aa8.48□□□□□ -1.05
RNF43-201ENST00000407977 A0A1W2PNM2 257 aa8.48□□□□□ -1.05
RNF43-201ENST00000407977 DSCR10P59022 87 aa8.47□□□□□ -1.05
RNF43-201ENST00000407977 PLA2G1BP04054 148 aaKnown RBP8.46□□□□□ -1.06
RNF43-201ENST00000407977 OCR1Q9BZK8 76 aa8.45□□□□□ -1.06
RNF43-201ENST00000407977 GIG44P09565 113 aaPredicted RBP8.45□□□□□ -1.06
RNF43-201ENST00000407977 C19orf73Q9NVV2 129 aa8.43□□□□□ -1.06
RNF43-201ENST00000407977 KRTAP24-1Q3LI83 254 aa8.43□□□□□ -1.06
RNF43-201ENST00000407977 C9orf163Q8N9P6 203 aa8.42□□□□□ -1.06
RNF43-201ENST00000407977 FAM104AQ969W3 186 aa8.42□□□□□ -1.06
RNF43-201ENST00000407977 APLNQ9ULZ1 77 aa8.42□□□□□ -1.06
RNF43-201ENST00000407977 IGLV5-37A0A075B6J1 123 aa8.4□□□□□ -1.06
RNF43-201ENST00000407977 LINC00304Q8N9R0 145 aa8.38□□□□□ -1.07
RNF43-201ENST00000407977 PCSK5Q92824 1860 aa8.37□□□□□ -1.07
RNF43-201ENST00000407977 SPRR4Q96PI1 79 aa8.37□□□□□ -1.07
RNF43-201ENST00000407977 CNBPP62633 177 aaKnown RBP8.37□□□□□ -1.07
RNF43-201ENST00000407977 ANKRD17O75179 2603 aaKnown RBP8.36□□□□□ -1.07
RNF43-201ENST00000407977 A0A0G2JQZ4 141 aa8.36□□□□□ -1.07
RNF43-201ENST00000407977 A0A1W2PNN7 141 aa8.36□□□□□ -1.07
RNF43-201ENST00000407977 IGLV7-46A0A075B6I9 117 aa8.34□□□□□ -1.07
RNF43-201ENST00000407977 Q75L30 129 aa8.34□□□□□ -1.07
RNF43-201ENST00000407977 CHD8Q9HCK8 2581 aa8.34□□□□□ -1.07
RNF43-201ENST00000407977 SPTBN4Q9H254 2564 aa8.33□□□□□ -1.08
RNF43-201ENST00000407977 IGLV7-43P04211 117 aa8.32□□□□□ -1.08
RNF43-201ENST00000407977 A0A087WTM6 91 aa8.31□□□□□ -1.08
RNF43-201ENST00000407977 A0A096LNT2 108 aa8.31□□□□□ -1.08
RNF43-201ENST00000407977 POLQO75417 2590 aa8.31□□□□□ -1.08
RNF43-201ENST00000407977 WWC2-AS2Q96NR7 200 aa8.31□□□□□ -1.08
RNF43-201ENST00000407977 ZNF575Q86XF7 245 aa8.29□□□□□ -1.08
RNF43-201ENST00000407977 ACANP16112 2415 aa8.29□□□□□ -1.08
RNF43-201ENST00000407977 Q5XG85 94 aa8.28□□□□□ -1.08
RNF43-201ENST00000407977 PRR26Q8N8Z3 221 aa8.28□□□□□ -1.08
RNF43-201ENST00000407977 PSORS1C2Q9UIG4 136 aa8.28□□□□□ -1.08
RNF43-201ENST00000407977 RBM12B-AS1Q9P1G2 102 aa8.27□□□□□ -1.09
RNF43-201ENST00000407977 LINC01558Q9Y6Z2 57 aa8.27□□□□□ -1.09
RNF43-201ENST00000407977 KRTAP10-11P60412 298 aa8.26□□□□□ -1.09
RNF43-201ENST00000407977 K7EIL1 84 aa8.25□□□□□ -1.09
RNF43-201ENST00000407977 LUZP6Q538Z0 58 aa8.24□□□□□ -1.09
RNF43-201ENST00000407977 Q8N9P0 234 aaPredicted RBP8.23□□□□□ -1.09
RNF43-201ENST00000407977 C9orf92A6NGG3 77 aa8.23□□□□□ -1.09
RNF43-201ENST00000407977 ANAPC11Q9NYG5 84 aa8.22□□□□□ -1.09
RNF43-201ENST00000407977 LINC01554Q52M75 96 aa8.22□□□□□ -1.09
RNF43-201ENST00000407977 Q8N1X5 172 aa8.22□□□□□ -1.09
RNF43-201ENST00000407977 FP248Q71RG6 208 aaPredicted RBP8.21□□□□□ -1.09
RNF43-201ENST00000407977 COX6B2Q6YFQ2 88 aa8.2□□□□□ -1.1
RNF43-201ENST00000407977 CASC10Q5T4H9 136 aa8.19□□□□□ -1.1
RNF43-201ENST00000407977 SRCAPQ6ZRS2 3230 aa8.19□□□□□ -1.1
RNF43-201ENST00000407977 A0A1B0GU33 70 aa8.19□□□□□ -1.1
RNF43-201ENST00000407977 A0A0D9SG42 100 aa8.18□□□□□ -1.1
RNF43-201ENST00000407977 KRTAP10-3P60369 221 aa8.18□□□□□ -1.1
RNF43-201ENST00000407977 HRES1P13985 223 aa8.17□□□□□ -1.1
RNF43-201ENST00000407977 CENPFP49454 3210 aa8.17□□□□□ -1.1
RNF43-201ENST00000407977 FASNP49327 2511 aaKnown RBP8.16□□□□□ -1.1
RNF43-201ENST00000407977 FAM229BQ4G0N7 80 aa8.15□□□□□ -1.11
RNF43-201ENST00000407977 MMP24-AS1A0A0U1RRL7 71 aa8.14□□□□□ -1.11
RNF43-201ENST00000407977 CR1P17927 2039 aa8.13□□□□□ -1.11
RNF43-201ENST00000407977 Q5VV11 94 aa8.12□□□□□ -1.11
RNF43-201ENST00000407977 CYSTM1Q9H1C7 97 aa8.12□□□□□ -1.11
RNF43-201ENST00000407977 SPRR1AP35321 89 aa8.12□□□□□ -1.11
RNF43-201ENST00000407977 J3QL48 77 aa8.11□□□□□ -1.11
RNF43-201ENST00000407977 DMAC1Q96GE9 116 aa8.08□□□□□ -1.12
RNF43-201ENST00000407977 SPRR1BP22528 89 aa8.07□□□□□ -1.12
RNF43-201ENST00000407977 LINC00472Q9H8W2 130 aa8.04□□□□□ -1.12
RNF43-201ENST00000407977 USP24Q9UPU5 2620 aa8.03□□□□□ -1.12
RNF43-201ENST00000407977 H3BS24 57 aa8.03□□□□□ -1.12
RNF43-201ENST00000407977 PRAC1Q96KF2 57 aa8.02□□□□□ -1.13
RNF43-201ENST00000407977 ZCCHC13Q8WW36 166 aaKnown RBP8.02□□□□□ -1.13
RNF43-201ENST00000407977 SMR3BP02814 79 aaPredicted RBP8.01□□□□□ -1.13
RNF43-201ENST00000407977 LINC00483Q53H64 154 aa8.01□□□□□ -1.13
RNF43-201ENST00000407977 Q8NDZ9 215 aa8.01□□□□□ -1.13
RNF43-201ENST00000407977 KRTAP1-3Q8IUG1 177 aa8.01□□□□□ -1.13
RNF43-201ENST00000407977 ASB16-AS1Q495Z4 193 aa7.99□□□□□ -1.13
RNF43-201ENST00000407977 SPINK7P58062 85 aa7.99□□□□□ -1.13
RNF43-201ENST00000407977 OXTP01178 125 aa7.98□□□□□ -1.13
RNF43-201ENST00000407977 Q5W150 140 aa7.98□□□□□ -1.13
RNF43-201ENST00000407977 KRTAP1-1Q07627 177 aa7.98□□□□□ -1.13
RNF43-201ENST00000407977 CSAG1Q6PB30 78 aa7.98□□□□□ -1.13
RNF43-201ENST00000407977 MGAM2Q2M2H8 2515 aa7.97□□□□□ -1.13
RNF43-201ENST00000407977 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.97□□□□□ -1.13
RNF43-201ENST00000407977 CAMK2N1Q7Z7J9 78 aa7.97□□□□□ -1.13
RNF43-201ENST00000407977 GOLGB1Q14789 3259 aaKnown RBP7.96□□□□□ -1.13
RNF43-201ENST00000407977 A0A0A0MQY5 61 aa7.96□□□□□ -1.13
RNF43-201ENST00000407977 PLAC8Q9NZF1 115 aa7.96□□□□□ -1.14
RNF43-201ENST00000407977 Q6ZSA8 131 aa7.95□□□□□ -1.14
RNF43-201ENST00000407977 EP400Q96L91 3159 aa7.95□□□□□ -1.14
RNF43-201ENST00000407977 EPG5Q9HCE0 2579 aa7.94□□□□□ -1.14
RNF43-201ENST00000407977 TNP2Q05952 138 aa7.9□□□□□ -1.14
RNF43-201ENST00000407977 PRRC2CQ9Y520 2896 aaKnown RBP7.88□□□□□ -1.15
RNF43-201ENST00000407977 S4R3F8 94 aa7.87□□□□□ -1.15
RNF43-201ENST00000407977 RPL37P61927 97 aaKnown RBP7.86□□□□□ -1.15
RNF43-201ENST00000407977 Q6ZR54 194 aa7.86□□□□□ -1.15
RNF43-201ENST00000407977 KRTAP26-1Q6PEX3 210 aa7.85□□□□□ -1.15
RNF43-201ENST00000407977 ROMO1P60602 79 aa7.85□□□□□ -1.15
RNF43-201ENST00000407977 BPTFQ12830 3046 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 246.8 ms