RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 FAM218AQ96MZ4 157 aa5.99□□□□□ -1.45
LIG4-202ENST00000405925 MT-ATP8P03928 68 aa5.99□□□□□ -1.45
LIG4-202ENST00000405925 SERTAD4-AS1Q5TG53 156 aa5.99□□□□□ -1.45
LIG4-202ENST00000405925 SS18L2Q9UHA2 77 aa5.98□□□□□ -1.45
LIG4-202ENST00000405925 OTOGQ6ZRI0 2925 aa5.97□□□□□ -1.45
LIG4-202ENST00000405925 PDZD2O15018 2839 aa5.97□□□□□ -1.45
LIG4-202ENST00000405925 FAM104AQ969W3 186 aa5.97□□□□□ -1.45
LIG4-202ENST00000405925 C9orf163Q8N9P6 203 aa5.96□□□□□ -1.45
LIG4-202ENST00000405925 LINC00476Q8WZB0 136 aa5.96□□□□□ -1.46
LIG4-202ENST00000405925 ELOF1P60002 83 aaKnown RBP5.95□□□□□ -1.46
LIG4-202ENST00000405925 C3orf22Q8N5N4 141 aa5.95□□□□□ -1.46
LIG4-202ENST00000405925 ATOX1O00244 68 aa5.95□□□□□ -1.46
LIG4-202ENST00000405925 Q6ZRX8 168 aa5.95□□□□□ -1.46
LIG4-202ENST00000405925 A0A087WSZ3 146 aa5.94□□□□□ -1.46
LIG4-202ENST00000405925 ATP5EP2Q5VTU8 51 aa5.94□□□□□ -1.46
LIG4-202ENST00000405925 IGLV6-57P01721 117 aa5.94□□□□□ -1.46
LIG4-202ENST00000405925 C9orf129Q5T035 196 aaKnown RBP5.94□□□□□ -1.46
LIG4-202ENST00000405925 EPM2AB3EWF7 344 aa5.94□□□□□ -1.46
LIG4-202ENST00000405925 Q6JHZ5 121 aa5.94□□□□□ -1.46
LIG4-202ENST00000405925 MP68P56378 58 aa5.93□□□□□ -1.46
LIG4-202ENST00000405925 WFDC13Q8IUB5 93 aa5.92□□□□□ -1.46
LIG4-202ENST00000405925 ST20-AS1Q8NBB2 130 aa5.92□□□□□ -1.46
LIG4-202ENST00000405925 TRBV7-6A0A0J9YX20 115 aa5.92□□□□□ -1.46
LIG4-202ENST00000405925 SMCPP49901 116 aaPredicted RBP5.92□□□□□ -1.46
LIG4-202ENST00000405925 XGP55808 180 aa5.92□□□□□ -1.46
LIG4-202ENST00000405925 FAM240AA0A1B0GVK7 77 aa5.91□□□□□ -1.46
LIG4-202ENST00000405925 TNP2Q05952 138 aa5.91□□□□□ -1.46
LIG4-202ENST00000405925 TENM1Q9UKZ4 2725 aa5.91□□□□□ -1.46
LIG4-202ENST00000405925 CELSR1Q9NYQ6 3014 aa5.91□□□□□ -1.46
LIG4-202ENST00000405925 IGLV1-50A0A075B6I6 118 aa5.9□□□□□ -1.46
LIG4-202ENST00000405925 BCE1O60756 84 aa5.9□□□□□ -1.46
LIG4-202ENST00000405925 TLX1NBP0CAT3 122 aa5.9□□□□□ -1.46
LIG4-202ENST00000405925 MOBPQ13875 183 aa5.9□□□□□ -1.46
LIG4-202ENST00000405925 CNBPP62633 177 aaKnown RBP5.9□□□□□ -1.47
LIG4-202ENST00000405925 KCNQ1DNQ9H478 68 aa5.89□□□□□ -1.47
LIG4-202ENST00000405925 PRO0461Q9UI25 63 aa5.89□□□□□ -1.47
LIG4-202ENST00000405925 A0A1W2PNN7 141 aa5.89□□□□□ -1.47
LIG4-202ENST00000405925 DEFB116Q30KQ4 102 aa5.89□□□□□ -1.47
LIG4-202ENST00000405925 LINC00846Q9NV44 126 aa5.89□□□□□ -1.47
LIG4-202ENST00000405925 NBPF19A0A087WUL8 3843 aa5.88□□□□□ -1.47
LIG4-202ENST00000405925 IGKV4-1P06312 121 aa5.88□□□□□ -1.47
LIG4-202ENST00000405925 KRTAP1-5Q9BYS1 174 aa5.88□□□□□ -1.47
LIG4-202ENST00000405925 FAM229AH3BQW9 127 aa5.88□□□□□ -1.47
LIG4-202ENST00000405925 LINC00528Q8N1L1 170 aa5.87□□□□□ -1.47
LIG4-202ENST00000405925 B5MCH6 92 aa5.87□□□□□ -1.47
LIG4-202ENST00000405925 SMIM20Q8N5G0 67 aa5.87□□□□□ -1.47
LIG4-202ENST00000405925 Q6ZVQ6 151 aa5.86□□□□□ -1.47
LIG4-202ENST00000405925 A0A087WVE0 104 aa5.86□□□□□ -1.47
LIG4-202ENST00000405925 SMR3BP02814 79 aaPredicted RBP5.86□□□□□ -1.47
LIG4-202ENST00000405925 LINC00336Q6ZUF6 198 aa5.85□□□□□ -1.47
LIG4-202ENST00000405925 C20orf197Q8N268 126 aa5.85□□□□□ -1.47
LIG4-202ENST00000405925 ZFHX3Q15911 3703 aa5.85□□□□□ -1.47
LIG4-202ENST00000405925 CRYGAP11844 174 aa5.84□□□□□ -1.47
LIG4-202ENST00000405925 IMUPQ9GZP8 106 aa5.84□□□□□ -1.47
LIG4-202ENST00000405925 PLA2G2DQ9UNK4 145 aa5.84□□□□□ -1.47
LIG4-202ENST00000405925 IGHV6-1A0A0B4J1U7 121 aa5.84□□□□□ -1.47
LIG4-202ENST00000405925 RPL37AP61513 92 aaKnown RBP5.83□□□□□ -1.48
LIG4-202ENST00000405925 SPENQ96T58 3664 aaKnown RBP5.82□□□□□ -1.48
LIG4-202ENST00000405925 Q8NBF4 154 aa5.82□□□□□ -1.48
LIG4-202ENST00000405925 SPACA4Q8TDM5 124 aa5.82□□□□□ -1.48
LIG4-202ENST00000405925 FBN1P35555 2871 aaKnown RBP5.82□□□□□ -1.48
LIG4-202ENST00000405925 PSORS1C2Q9UIG4 136 aa5.82□□□□□ -1.48
LIG4-202ENST00000405925 Q8N9L7 120 aa5.82□□□□□ -1.48
LIG4-202ENST00000405925 CSMD1Q96PZ7 3565 aa5.82□□□□□ -1.48
LIG4-202ENST00000405925 ZNF861PO60384 105 aa5.81□□□□□ -1.48
LIG4-202ENST00000405925 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.81□□□□□ -1.48
LIG4-202ENST00000405925 TENM3Q9P273 2699 aa5.8□□□□□ -1.48
LIG4-202ENST00000405925 LINC01547P58512 204 aaPredicted RBP5.8□□□□□ -1.48
LIG4-202ENST00000405925 Q6ZQT0 140 aa5.8□□□□□ -1.48
LIG4-202ENST00000405925 TYMSOSQ8TAI1 123 aa5.8□□□□□ -1.48
LIG4-202ENST00000405925 VWFP04275 2813 aa5.8□□□□□ -1.48
LIG4-202ENST00000405925 LIMD2Q9BT23 127 aa5.8□□□□□ -1.48
LIG4-202ENST00000405925 PLA2G1BP04054 148 aaKnown RBP5.8□□□□□ -1.48
LIG4-202ENST00000405925 CSMD2Q7Z408 3487 aa5.79□□□□□ -1.48
LIG4-202ENST00000405925 ERC2-IT1O76042 136 aa5.79□□□□□ -1.48
LIG4-202ENST00000405925 KRTAP26-1Q6PEX3 210 aa5.79□□□□□ -1.48
LIG4-202ENST00000405925 KRTAP21-3Q3LHN1 58 aa5.79□□□□□ -1.48
LIG4-202ENST00000405925 CDIP1Q9H305 208 aa5.79□□□□□ -1.48
LIG4-202ENST00000405925 FAM30AQ9NZY2 134 aa5.79□□□□□ -1.48
LIG4-202ENST00000405925 J3KT08 172 aa5.78□□□□□ -1.48
LIG4-202ENST00000405925 Q8N377 158 aa5.78□□□□□ -1.48
LIG4-202ENST00000405925 ANAPC11Q9NYG5 84 aa5.78□□□□□ -1.48
LIG4-202ENST00000405925 UQCRQO14949 82 aa5.78□□□□□ -1.48
LIG4-202ENST00000405925 CASC2Q6XLA1 102 aa5.78□□□□□ -1.48
LIG4-202ENST00000405925 SERP2Q8N6R1 65 aa5.77□□□□□ -1.49
LIG4-202ENST00000405925 SVEP1Q4LDE5 3571 aa5.77□□□□□ -1.49
LIG4-202ENST00000405925 BSNQ9UPA5 3926 aa5.77□□□□□ -1.49
LIG4-202ENST00000405925 IGLV5-37A0A075B6J1 123 aa5.77□□□□□ -1.49
LIG4-202ENST00000405925 LOC110117498A0A087WWA1 95 aa5.77□□□□□ -1.49
LIG4-202ENST00000405925 IGLV7-43P04211 117 aa5.77□□□□□ -1.49
LIG4-202ENST00000405925 Q8NDZ9 215 aa5.77□□□□□ -1.49
LIG4-202ENST00000405925 A0A0G2JQZ4 141 aa5.76□□□□□ -1.49
LIG4-202ENST00000405925 SNURFQ9Y675 71 aa5.76□□□□□ -1.49
LIG4-202ENST00000405925 Q6Q795 121 aa5.75□□□□□ -1.49
LIG4-202ENST00000405925 CHKB-CPT1BH3BT56 60 aa5.75□□□□□ -1.49
LIG4-202ENST00000405925 LCE6AA0A183 80 aa5.74□□□□□ -1.49
LIG4-202ENST00000405925 CXCL6P80162 114 aa5.74□□□□□ -1.49
LIG4-202ENST00000405925 IGFL1Q6UW32 110 aa5.74□□□□□ -1.49
LIG4-202ENST00000405925 TRBV7-4A0A0J9YYF1 115 aa5.73□□□□□ -1.49
LIG4-202ENST00000405925 A0A1B0GW54 56 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms