RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 SPRR1AP35321 89 aa20.4■□□□□ 0.86
CSNK1E-204ENST00000403904 BVES-AS1Q5T3Y7 98 aa20.4■□□□□ 0.86
CSNK1E-204ENST00000403904 RAB37Q96AX2 223 aa20.4■□□□□ 0.86
CSNK1E-204ENST00000403904 A0A0B4J2C4 111 aa20.38■□□□□ 0.85
CSNK1E-204ENST00000403904 HINT1P49773 126 aaPredicted RBP20.38■□□□□ 0.85
CSNK1E-204ENST00000403904 NHP2Q9NX24 153 aaKnown RBP20.38■□□□□ 0.85
CSNK1E-204ENST00000403904 CBY1Q9Y3M2 126 aa20.38■□□□□ 0.85
CSNK1E-204ENST00000403904 RPL13AP40429 203 aaKnown RBP20.38■□□□□ 0.85
CSNK1E-204ENST00000403904 FAM19A1Q7Z5A9 133 aa20.38■□□□□ 0.85
CSNK1E-204ENST00000403904 KRTAP4-5Q9BYR2 181 aa20.38■□□□□ 0.85
CSNK1E-204ENST00000403904 ZNF73O43830 326 aaPredicted RBP20.37■□□□□ 0.85
CSNK1E-204ENST00000403904 KRTAP4-16G5E9R7 235 aaPredicted RBP20.35■□□□□ 0.85
CSNK1E-204ENST00000403904 ETDCA0A1B0GVM5 59 aa20.34■□□□□ 0.85
CSNK1E-204ENST00000403904 PRLHP81277 87 aa20.34■□□□□ 0.85
CSNK1E-204ENST00000403904 UBE2AP49459 152 aa20.33■□□□□ 0.84
CSNK1E-204ENST00000403904 SMIM11BQ8TCY0 68 aa20.33■□□□□ 0.84
CSNK1E-204ENST00000403904 M0R143 59 aa20.32■□□□□ 0.84
CSNK1E-204ENST00000403904 K7ERJ3 54 aa20.31■□□□□ 0.84
CSNK1E-204ENST00000403904 C6orf99Q4VX62 202 aa20.31■□□□□ 0.84
CSNK1E-204ENST00000403904 PRO1854Q9UHT4 67 aa20.31■□□□□ 0.84
CSNK1E-204ENST00000403904 H7C2G1 150 aa20.3■□□□□ 0.84
CSNK1E-204ENST00000403904 DIRC1Q969H9 104 aa20.3■□□□□ 0.84
CSNK1E-204ENST00000403904 ZNF861PO60384 105 aa20.29■□□□□ 0.84
CSNK1E-204ENST00000403904 KRTAP13-1Q8IUC0 172 aa20.29■□□□□ 0.84
CSNK1E-204ENST00000403904 A0A1B0GWB2 263 aa20.28■□□□□ 0.84
CSNK1E-204ENST00000403904 B5MCH6 92 aa20.27■□□□□ 0.84
CSNK1E-204ENST00000403904 RPL28P46779 137 aaKnown RBP20.27■□□□□ 0.84
CSNK1E-204ENST00000403904 PKHD1L1Q86WI1 4243 aa20.25■□□□□ 0.83
CSNK1E-204ENST00000403904 ABCA13Q86UQ4 5058 aa20.23■□□□□ 0.83
CSNK1E-204ENST00000403904 H0Y9J4 135 aa20.22■□□□□ 0.83
CSNK1E-204ENST00000403904 Q6ZRX8 168 aa20.22■□□□□ 0.83
CSNK1E-204ENST00000403904 SPINK6Q6UWN8 80 aa20.21■□□□□ 0.83
CSNK1E-204ENST00000403904 BATFQ16520 125 aa20.21■□□□□ 0.83
CSNK1E-204ENST00000403904 Q1RN00 199 aa20.21■□□□□ 0.83
CSNK1E-204ENST00000403904 HIGD2AQ9BW72 106 aa20.2■□□□□ 0.82
CSNK1E-204ENST00000403904 PCP4L1A6NKN8 68 aa20.19■□□□□ 0.82
CSNK1E-204ENST00000403904 COX7BP24311 80 aa20.18■□□□□ 0.82
CSNK1E-204ENST00000403904 ELOF1P60002 83 aaKnown RBP20.17■□□□□ 0.82
CSNK1E-204ENST00000403904 Q9BRP9 147 aa20.17■□□□□ 0.82
CSNK1E-204ENST00000403904 TRBV7-6A0A0J9YX20 115 aa20.16■□□□□ 0.82
CSNK1E-204ENST00000403904 SMCR5Q8TEV8 140 aa20.15■□□□□ 0.82
CSNK1E-204ENST00000403904 INAFM2P0DMQ5 153 aa20.13■□□□□ 0.81
CSNK1E-204ENST00000403904 VAMP3Q15836 100 aa20.12■□□□□ 0.81
CSNK1E-204ENST00000403904 TSPAN13O95857 204 aa20.11■□□□□ 0.81
CSNK1E-204ENST00000403904 ERC2-IT1O76042 136 aa20.08■□□□□ 0.81
CSNK1E-204ENST00000403904 FLG2Q5D862 2391 aaPredicted RBP20.06■□□□□ 0.8
CSNK1E-204ENST00000403904 TRIAP1O43715 76 aa20.05■□□□□ 0.8
CSNK1E-204ENST00000403904 DHRS4-AS1Q9P1J3 65 aa20.04■□□□□ 0.8
CSNK1E-204ENST00000403904 PSMB2P49721 201 aa20.04■□□□□ 0.8
CSNK1E-204ENST00000403904 SNHG12Q9BXW3 62 aa20.04■□□□□ 0.8
CSNK1E-204ENST00000403904 MYCBP2O75592 4640 aa20.02■□□□□ 0.8
CSNK1E-204ENST00000403904 LRP1Q07954 4544 aaKnown RBP20■□□□□ 0.79
CSNK1E-204ENST00000403904 LINC00575Q6W349 94 aa19.99■□□□□ 0.79
CSNK1E-204ENST00000403904 H0YGX0 51 aa19.96■□□□□ 0.79
CSNK1E-204ENST00000403904 FAT3Q8TDW7 4589 aa19.96■□□□□ 0.79
CSNK1E-204ENST00000403904 PCLOQ9Y6V0 5065 aa19.95■□□□□ 0.78
CSNK1E-204ENST00000403904 SLC25A20O43772 301 aa19.95■□□□□ 0.78
CSNK1E-204ENST00000403904 KRTAP1-4P0C5Y4 121 aa19.95■□□□□ 0.78
CSNK1E-204ENST00000403904 NAA38Q9BRA0 125 aaKnown RBP19.95■□□□□ 0.78
CSNK1E-204ENST00000403904 ST20-AS1Q8NBB2 130 aa19.94■□□□□ 0.78
CSNK1E-204ENST00000403904 SPRR4Q96PI1 79 aa19.93■□□□□ 0.78
CSNK1E-204ENST00000403904 COX6CP09669 75 aa19.92■□□□□ 0.78
CSNK1E-204ENST00000403904 FAM218AQ96MZ4 157 aa19.92■□□□□ 0.78
CSNK1E-204ENST00000403904 hADV29S1A0JD25 119 aa19.91■□□□□ 0.78
CSNK1E-204ENST00000403904 ANAPC11Q9NYG5 84 aa19.91■□□□□ 0.78
CSNK1E-204ENST00000403904 ZNF706Q9Y5V0 76 aaPredicted RBP19.91■□□□□ 0.78
CSNK1E-204ENST00000403904 CLEC2BQ92478 149 aa19.89■□□□□ 0.77
CSNK1E-204ENST00000403904 TAX1BP3O14907 124 aa19.87■□□□□ 0.77
CSNK1E-204ENST00000403904 SCGB1C2P0DMR2 95 aa19.87■□□□□ 0.77
CSNK1E-204ENST00000403904 GAGE2AQ6NT46 116 aa19.87■□□□□ 0.77
CSNK1E-204ENST00000403904 COL5A1-AS1Q5SY13 56 aa19.83■□□□□ 0.76
CSNK1E-204ENST00000403904 H3BUT2 72 aa19.82■□□□□ 0.76
CSNK1E-204ENST00000403904 Q6ZQY7 126 aa19.82■□□□□ 0.76
CSNK1E-204ENST00000403904 DEFB105AQ8NG35 78 aa19.82■□□□□ 0.76
CSNK1E-204ENST00000403904 LINC01600Q96MT4 127 aa19.81■□□□□ 0.76
CSNK1E-204ENST00000403904 C9orf118A6NHY6 69 aa19.8■□□□□ 0.76
CSNK1E-204ENST00000403904 SNCGO76070 127 aa19.79■□□□□ 0.76
CSNK1E-204ENST00000403904 LINC00483Q53H64 154 aa19.78■□□□□ 0.76
CSNK1E-204ENST00000403904 A0A087X002 238 aa19.78■□□□□ 0.76
CSNK1E-204ENST00000403904 PRR26Q8N8Z3 221 aa19.78■□□□□ 0.76
CSNK1E-204ENST00000403904 A0A1B0GX51 115 aa19.76■□□□□ 0.75
CSNK1E-204ENST00000403904 LINC01547P58512 204 aaPredicted RBP19.76■□□□□ 0.75
CSNK1E-204ENST00000403904 OXTP01178 125 aa19.75■□□□□ 0.75
CSNK1E-204ENST00000403904 FAM229BQ4G0N7 80 aa19.75■□□□□ 0.75
CSNK1E-204ENST00000403904 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP19.75■□□□□ 0.75
CSNK1E-204ENST00000403904 IGLV5-48A0A075B6I7 105 aa19.74■□□□□ 0.75
CSNK1E-204ENST00000403904 CRYGAP11844 174 aa19.74■□□□□ 0.75
CSNK1E-204ENST00000403904 TEX49A0A1B0GTD5 131 aa19.72■□□□□ 0.75
CSNK1E-204ENST00000403904 SPRR1BP22528 89 aa19.72■□□□□ 0.75
CSNK1E-204ENST00000403904 KRTAP29-1A8MX34 341 aaPredicted RBP19.71■□□□□ 0.75
CSNK1E-204ENST00000403904 LST1O00453 97 aa19.7■□□□□ 0.74
CSNK1E-204ENST00000403904 Q8N377 158 aa19.7■□□□□ 0.74
CSNK1E-204ENST00000403904 TNXBP22105 4242 aa19.7■□□□□ 0.74
CSNK1E-204ENST00000403904 TCL1BO95988 128 aa19.68■□□□□ 0.74
CSNK1E-204ENST00000403904 KRTAP13-2Q52LG2 175 aa19.68■□□□□ 0.74
CSNK1E-204ENST00000403904 A0A1W2PPM0 123 aa19.67■□□□□ 0.74
CSNK1E-204ENST00000403904 DNAL4O96015 105 aa19.67■□□□□ 0.74
CSNK1E-204ENST00000403904 LYRM7Q5U5X0 104 aa19.67■□□□□ 0.74
CSNK1E-204ENST00000403904 C3orf22Q8N5N4 141 aa19.66■□□□□ 0.74
CSNK1E-204ENST00000403904 TRACP01848 142 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms