RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 LINC00208Q96KT6 92 aa9.51□□□□□ -0.89
GABPA-202ENST00000400075 VPREB1P12018 145 aa9.5□□□□□ -0.89
GABPA-202ENST00000400075 C15orf56Q8N910 161 aa9.5□□□□□ -0.89
GABPA-202ENST00000400075 TACC2O95359 2948 aa9.5□□□□□ -0.89
GABPA-202ENST00000400075 ZNF861PO60384 105 aa9.49□□□□□ -0.89
GABPA-202ENST00000400075 HIVEP1P15822 2718 aa9.49□□□□□ -0.89
GABPA-202ENST00000400075 IGKV2D-30A0A075B6S6 120 aa9.49□□□□□ -0.89
GABPA-202ENST00000400075 IGKV2-30P06310 120 aa9.49□□□□□ -0.89
GABPA-202ENST00000400075 SOSTDC1Q6X4U4 206 aa9.48□□□□□ -0.89
GABPA-202ENST00000400075 SERTAD4-AS1Q5TG53 156 aa9.48□□□□□ -0.89
GABPA-202ENST00000400075 LINC00304Q8N9R0 145 aa9.47□□□□□ -0.89
GABPA-202ENST00000400075 ST20-AS1Q8NBB2 130 aa9.47□□□□□ -0.89
GABPA-202ENST00000400075 SPAG11AQ6PDA7 123 aa9.46□□□□□ -0.89
GABPA-202ENST00000400075 ATP11AUNQ6ZP68 121 aa9.46□□□□□ -0.9
GABPA-202ENST00000400075 HCG22E2RYF7 251 aa9.46□□□□□ -0.9
GABPA-202ENST00000400075 MT-ATP8P03928 68 aa9.46□□□□□ -0.9
GABPA-202ENST00000400075 COX6B2Q6YFQ2 88 aa9.44□□□□□ -0.9
GABPA-202ENST00000400075 IGLV1-50A0A075B6I6 118 aa9.43□□□□□ -0.9
GABPA-202ENST00000400075 IMUPQ9GZP8 106 aa9.43□□□□□ -0.9
GABPA-202ENST00000400075 CNBPP62633 177 aaKnown RBP9.42□□□□□ -0.9
GABPA-202ENST00000400075 SSBP3-AS1Q7Z2R9 100 aa9.42□□□□□ -0.9
GABPA-202ENST00000400075 COL12A1Q99715 3063 aa9.42□□□□□ -0.9
GABPA-202ENST00000400075 SPINK1P00995 79 aa9.42□□□□□ -0.9
GABPA-202ENST00000400075 PRR15LQ9BU68 103 aa9.42□□□□□ -0.9
GABPA-202ENST00000400075 hDV103S1A0JD37 113 aa9.41□□□□□ -0.9
GABPA-202ENST00000400075 LINC00313P59037 77 aa9.41□□□□□ -0.9
GABPA-202ENST00000400075 UQCRQO14949 82 aa9.4□□□□□ -0.9
GABPA-202ENST00000400075 IGLV7-43P04211 117 aa9.4□□□□□ -0.9
GABPA-202ENST00000400075 SNURFQ9Y675 71 aa9.4□□□□□ -0.9
GABPA-202ENST00000400075 PSORS1C2Q9UIG4 136 aa9.4□□□□□ -0.9
GABPA-202ENST00000400075 FAM240AA0A1B0GVK7 77 aa9.4□□□□□ -0.91
GABPA-202ENST00000400075 PCOTHQ58A44 107 aa9.4□□□□□ -0.91
GABPA-202ENST00000400075 ATMQ13315 3056 aa9.39□□□□□ -0.91
GABPA-202ENST00000400075 SERP2Q8N6R1 65 aa9.39□□□□□ -0.91
GABPA-202ENST00000400075 KCNQ1DNQ9H478 68 aa9.39□□□□□ -0.91
GABPA-202ENST00000400075 TLX1NBP0CAT3 122 aa9.38□□□□□ -0.91
GABPA-202ENST00000400075 NDUFC1O43677 76 aa9.38□□□□□ -0.91
GABPA-202ENST00000400075 LCE6AA0A183 80 aa9.38□□□□□ -0.91
GABPA-202ENST00000400075 Q96NJ1 140 aa9.38□□□□□ -0.91
GABPA-202ENST00000400075 SZT2Q5T011 3432 aa9.37□□□□□ -0.91
GABPA-202ENST00000400075 IGLV6-57P01721 117 aa9.37□□□□□ -0.91
GABPA-202ENST00000400075 A0A1B0GW54 56 aa9.36□□□□□ -0.91
GABPA-202ENST00000400075 CDH23Q9H251 3354 aa9.36□□□□□ -0.91
GABPA-202ENST00000400075 H0Y9P7 68 aa9.36□□□□□ -0.91
GABPA-202ENST00000400075 KMT2BQ9UMN6 2715 aaPredicted RBP9.35□□□□□ -0.91
GABPA-202ENST00000400075 A0A1W2PNN7 141 aa9.35□□□□□ -0.91
GABPA-202ENST00000400075 C9orf129Q5T035 196 aaKnown RBP9.35□□□□□ -0.91
GABPA-202ENST00000400075 NBEAL2Q6ZNJ1 2754 aa9.35□□□□□ -0.91
GABPA-202ENST00000400075 COL6A3P12111 3177 aa9.34□□□□□ -0.91
GABPA-202ENST00000400075 A0A087WVE0 104 aa9.33□□□□□ -0.92
GABPA-202ENST00000400075 LINC00846Q9NV44 126 aa9.33□□□□□ -0.92
GABPA-202ENST00000400075 LAMA1P25391 3075 aa9.32□□□□□ -0.92
GABPA-202ENST00000400075 DMXL2Q8TDJ6 3036 aa9.31□□□□□ -0.92
GABPA-202ENST00000400075 TRAV7A0A075B6U4 112 aa9.3□□□□□ -0.92
GABPA-202ENST00000400075 KRTAP21-3Q3LHN1 58 aa9.3□□□□□ -0.92
GABPA-202ENST00000400075 FAM218AQ96MZ4 157 aa9.3□□□□□ -0.92
GABPA-202ENST00000400075 ANAPC11Q9NYG5 84 aa9.3□□□□□ -0.92
GABPA-202ENST00000400075 PLA2G2DQ9UNK4 145 aa9.3□□□□□ -0.92
GABPA-202ENST00000400075 TP53AIP1Q9HCN2 124 aa9.3□□□□□ -0.92
GABPA-202ENST00000400075 UTP20O75691 2785 aaKnown RBP9.28□□□□□ -0.92
GABPA-202ENST00000400075 FLG2Q5D862 2391 aaPredicted RBP9.27□□□□□ -0.93
GABPA-202ENST00000400075 C8orf87E5RJ46 101 aa9.26□□□□□ -0.93
GABPA-202ENST00000400075 TNRC18O15417 2968 aaPredicted RBP9.26□□□□□ -0.93
GABPA-202ENST00000400075 TRBV7-4A0A0J9YYF1 115 aa9.26□□□□□ -0.93
GABPA-202ENST00000400075 ATP5EP56381 51 aaPredicted RBP9.26□□□□□ -0.93
GABPA-202ENST00000400075 CXCL6P80162 114 aa9.26□□□□□ -0.93
GABPA-202ENST00000400075 MPLKIPQ8TAP9 179 aa9.26□□□□□ -0.93
GABPA-202ENST00000400075 C1orf64Q8NEQ6 169 aa9.25□□□□□ -0.93
GABPA-202ENST00000400075 C7orf65Q6ZTY9 151 aa9.24□□□□□ -0.93
GABPA-202ENST00000400075 LITAFQ99732 161 aa9.24□□□□□ -0.93
GABPA-202ENST00000400075 V9GYY9 64 aa9.24□□□□□ -0.93
GABPA-202ENST00000400075 C9orf92A6NGG3 77 aa9.24□□□□□ -0.93
GABPA-202ENST00000400075 COX7CP15954 63 aa9.23□□□□□ -0.93
GABPA-202ENST00000400075 BOD1L1Q8NFC6 3051 aa9.23□□□□□ -0.93
GABPA-202ENST00000400075 SPRR4Q96PI1 79 aa9.22□□□□□ -0.93
GABPA-202ENST00000400075 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.21□□□□□ -0.93
GABPA-202ENST00000400075 APCP25054 2843 aa9.2□□□□□ -0.94
GABPA-202ENST00000400075 Q6ZQT0 140 aa9.2□□□□□ -0.94
GABPA-202ENST00000400075 TRBV7-7A0A0K0K1E9 115 aa9.2□□□□□ -0.94
GABPA-202ENST00000400075 SMIM29Q86T20 159 aa9.2□□□□□ -0.94
GABPA-202ENST00000400075 OBSCN-AS1Q96MR7 158 aa9.19□□□□□ -0.94
GABPA-202ENST00000400075 CRYBG3Q68DQ2 2970 aa9.19□□□□□ -0.94
GABPA-202ENST00000400075 IGFL1Q6UW32 110 aa9.19□□□□□ -0.94
GABPA-202ENST00000400075 LOC110117498A0A087WWA1 95 aa9.18□□□□□ -0.94
GABPA-202ENST00000400075 NBEAQ8NFP9 2946 aa9.18□□□□□ -0.94
GABPA-202ENST00000400075 PRR26Q8N8Z3 221 aa9.16□□□□□ -0.94
GABPA-202ENST00000400075 ZZEF1O43149 2961 aa9.16□□□□□ -0.94
GABPA-202ENST00000400075 TMEM254Q8TBM7 123 aa9.16□□□□□ -0.94
GABPA-202ENST00000400075 A8MWP4 228 aa9.15□□□□□ -0.94
GABPA-202ENST00000400075 A6NED7 52 aa9.15□□□□□ -0.95
GABPA-202ENST00000400075 EIF4EBP3O60516 100 aaPredicted RBP9.15□□□□□ -0.95
GABPA-202ENST00000400075 Q8N377 158 aa9.15□□□□□ -0.95
GABPA-202ENST00000400075 KALRNO60229 2985 aa9.14□□□□□ -0.95
GABPA-202ENST00000400075 DSCR10P59022 87 aa9.14□□□□□ -0.95
GABPA-202ENST00000400075 MRPL34Q9BQ48 92 aaKnown RBP9.14□□□□□ -0.95
GABPA-202ENST00000400075 NIPBLQ6KC79 2804 aaeCLIP9.13□□□□□ -0.95
GABPA-202ENST00000400075 IGLV7-46A0A075B6I9 117 aa9.13□□□□□ -0.95
GABPA-202ENST00000400075 TRAV22A0A0B4J277 110 aa9.13□□□□□ -0.95
GABPA-202ENST00000400075 ERC2-IT1O76042 136 aa9.12□□□□□ -0.95
GABPA-202ENST00000400075 IGLV5-37A0A075B6J1 123 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms