RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 PCOTHQ58A44 107 aa9.9□□□□□ -0.82
RPRD1A-202ENST00000399022 ZANQ9Y493 2812 aa9.9□□□□□ -0.82
RPRD1A-202ENST00000399022 C6orf48Q9UBA6 75 aa9.9□□□□□ -0.83
RPRD1A-202ENST00000399022 UBR5O95071 2799 aaPredicted RBP9.9□□□□□ -0.83
RPRD1A-202ENST00000399022 OBSCN-AS1Q96MR7 158 aa9.89□□□□□ -0.83
RPRD1A-202ENST00000399022 ELOF1P60002 83 aaKnown RBP9.89□□□□□ -0.83
RPRD1A-202ENST00000399022 CASC2Q6XLA1 102 aa9.89□□□□□ -0.83
RPRD1A-202ENST00000399022 CSNK1G2-AS1Q8NCQ2 148 aa9.89□□□□□ -0.83
RPRD1A-202ENST00000399022 KRTAP1-3Q8IUG1 177 aa9.88□□□□□ -0.83
RPRD1A-202ENST00000399022 UNC79Q9P2D8 2635 aa9.88□□□□□ -0.83
RPRD1A-202ENST00000399022 F8WDY8 70 aa9.87□□□□□ -0.83
RPRD1A-202ENST00000399022 SETXQ7Z333 2677 aaKnown RBP9.87□□□□□ -0.83
RPRD1A-202ENST00000399022 A8MUN3 132 aa9.87□□□□□ -0.83
RPRD1A-202ENST00000399022 OXTP01178 125 aa9.87□□□□□ -0.83
RPRD1A-202ENST00000399022 C19orf73Q9NVV2 129 aa9.87□□□□□ -0.83
RPRD1A-202ENST00000399022 LAMA5O15230 3695 aa9.86□□□□□ -0.83
RPRD1A-202ENST00000399022 hDV103S1A0JD37 113 aa9.85□□□□□ -0.83
RPRD1A-202ENST00000399022 ERC2-IT1O76042 136 aa9.85□□□□□ -0.83
RPRD1A-202ENST00000399022 LIMD2Q9BT23 127 aa9.85□□□□□ -0.83
RPRD1A-202ENST00000399022 RELNP78509 3460 aa9.84□□□□□ -0.83
RPRD1A-202ENST00000399022 IGLV6-57P01721 117 aa9.84□□□□□ -0.83
RPRD1A-202ENST00000399022 ASH1LQ9NR48 2969 aaKnown RBP9.83□□□□□ -0.84
RPRD1A-202ENST00000399022 NOTCH1P46531 2555 aa9.83□□□□□ -0.84
RPRD1A-202ENST00000399022 Q8NAQ8 132 aa9.83□□□□□ -0.84
RPRD1A-202ENST00000399022 IL17DQ8TAD2 202 aa9.82□□□□□ -0.84
RPRD1A-202ENST00000399022 ZFHX4Q86UP3 3567 aa9.82□□□□□ -0.84
RPRD1A-202ENST00000399022 KRTAP10-3P60369 221 aa9.82□□□□□ -0.84
RPRD1A-202ENST00000399022 C1orf64Q8NEQ6 169 aa9.82□□□□□ -0.84
RPRD1A-202ENST00000399022 C7orf33Q8WU49 177 aa9.81□□□□□ -0.84
RPRD1A-202ENST00000399022 UTP20O75691 2785 aaKnown RBP9.81□□□□□ -0.84
RPRD1A-202ENST00000399022 HRNRQ86YZ3 2850 aaPredicted RBP9.8□□□□□ -0.84
RPRD1A-202ENST00000399022 LINC00167Q96N53 147 aa9.8□□□□□ -0.84
RPRD1A-202ENST00000399022 CR1P17927 2039 aa9.79□□□□□ -0.84
RPRD1A-202ENST00000399022 TRBV7-4A0A0J9YYF1 115 aa9.79□□□□□ -0.84
RPRD1A-202ENST00000399022 Q8NBF4 154 aa9.79□□□□□ -0.84
RPRD1A-202ENST00000399022 C22orf24Q9Y442 160 aa9.79□□□□□ -0.84
RPRD1A-202ENST00000399022 KRTAP1-1Q07627 177 aa9.78□□□□□ -0.84
RPRD1A-202ENST00000399022 C14orf177Q52M58 125 aa9.78□□□□□ -0.84
RPRD1A-202ENST00000399022 REG3GQ6UW15 175 aa9.78□□□□□ -0.84
RPRD1A-202ENST00000399022 SPINK6Q6UWN8 80 aa9.78□□□□□ -0.84
RPRD1A-202ENST00000399022 FP248Q71RG6 208 aaPredicted RBP9.78□□□□□ -0.84
RPRD1A-202ENST00000399022 CRYBG3Q68DQ2 2970 aa9.76□□□□□ -0.85
RPRD1A-202ENST00000399022 ITPR2Q14571 2701 aa9.76□□□□□ -0.85
RPRD1A-202ENST00000399022 TRAV22A0A0B4J277 110 aa9.75□□□□□ -0.85
RPRD1A-202ENST00000399022 Q9BRP9 147 aa9.75□□□□□ -0.85
RPRD1A-202ENST00000399022 KRTAP24-1Q3LI83 254 aa9.75□□□□□ -0.85
RPRD1A-202ENST00000399022 K7EQZ3 153 aa9.75□□□□□ -0.85
RPRD1A-202ENST00000399022 COL6A5A8TX70 2615 aa9.75□□□□□ -0.85
RPRD1A-202ENST00000399022 IGLV9-49A0A0B4J1Y8 123 aa9.74□□□□□ -0.85
RPRD1A-202ENST00000399022 VPREB1P12018 145 aa9.74□□□□□ -0.85
RPRD1A-202ENST00000399022 PRLHP81277 87 aa9.74□□□□□ -0.85
RPRD1A-202ENST00000399022 ST20-AS1Q8NBB2 130 aa9.74□□□□□ -0.85
RPRD1A-202ENST00000399022 SPAG11AQ6PDA7 123 aa9.74□□□□□ -0.85
RPRD1A-202ENST00000399022 STAB1Q9NY15 2570 aa9.73□□□□□ -0.85
RPRD1A-202ENST00000399022 LINC00528Q8N1L1 170 aa9.72□□□□□ -0.85
RPRD1A-202ENST00000399022 A0A1B0GW54 56 aa9.71□□□□□ -0.85
RPRD1A-202ENST00000399022 DCHS2Q6V1P9 2916 aa9.7□□□□□ -0.86
RPRD1A-202ENST00000399022 RPL37AP61513 92 aaKnown RBP9.7□□□□□ -0.86
RPRD1A-202ENST00000399022 LINC01556Q5JQF7 62 aa9.7□□□□□ -0.86
RPRD1A-202ENST00000399022 LINC00476Q8WZB0 136 aa9.69□□□□□ -0.86
RPRD1A-202ENST00000399022 IGHV6-1A0A0B4J1U7 121 aa9.69□□□□□ -0.86
RPRD1A-202ENST00000399022 Q6ZRX8 168 aa9.69□□□□□ -0.86
RPRD1A-202ENST00000399022 CD164Q04900 197 aa9.68□□□□□ -0.86
RPRD1A-202ENST00000399022 GVQW2A0A096LPI5 108 aaPredicted RBP9.68□□□□□ -0.86
RPRD1A-202ENST00000399022 NF1P21359 2839 aa9.68□□□□□ -0.86
RPRD1A-202ENST00000399022 FAM229BQ4G0N7 80 aa9.68□□□□□ -0.86
RPRD1A-202ENST00000399022 Q6ZRP5 223 aa9.67□□□□□ -0.86
RPRD1A-202ENST00000399022 OCR1Q9BZK8 76 aa9.66□□□□□ -0.86
RPRD1A-202ENST00000399022 NBEAL1Q6ZS30 2694 aa9.66□□□□□ -0.86
RPRD1A-202ENST00000399022 LINC00612Q8N6U2 182 aa9.65□□□□□ -0.86
RPRD1A-202ENST00000399022 Q8N377 158 aa9.64□□□□□ -0.87
RPRD1A-202ENST00000399022 FBN2P35556 2912 aa9.64□□□□□ -0.87
RPRD1A-202ENST00000399022 EPM2AB3EWF7 344 aa9.62□□□□□ -0.87
RPRD1A-202ENST00000399022 CELSR2Q9HCU4 2923 aa9.62□□□□□ -0.87
RPRD1A-202ENST00000399022 KRTAP10-11P60412 298 aa9.62□□□□□ -0.87
RPRD1A-202ENST00000399022 H3BNG1 76 aa9.61□□□□□ -0.87
RPRD1A-202ENST00000399022 PRR15Q8IV56 129 aa9.61□□□□□ -0.87
RPRD1A-202ENST00000399022 A0A0G2JQZ4 141 aa9.61□□□□□ -0.87
RPRD1A-202ENST00000399022 A0A1W2PNN7 141 aa9.61□□□□□ -0.87
RPRD1A-202ENST00000399022 H3BPC8 53 aa9.6□□□□□ -0.87
RPRD1A-202ENST00000399022 APCP25054 2843 aa9.6□□□□□ -0.87
RPRD1A-202ENST00000399022 LINC00588Q9Y4M8 146 aa9.6□□□□□ -0.87
RPRD1A-202ENST00000399022 SERTAD4-AS1Q5TG53 156 aa9.6□□□□□ -0.87
RPRD1A-202ENST00000399022 COA5Q86WW8 74 aa9.59□□□□□ -0.87
RPRD1A-202ENST00000399022 PRR34Q9NV39 138 aa9.59□□□□□ -0.87
RPRD1A-202ENST00000399022 CYP4F30PQ9H0H9 118 aa9.59□□□□□ -0.87
RPRD1A-202ENST00000399022 A0A1W2PNM2 257 aa9.58□□□□□ -0.88
RPRD1A-202ENST00000399022 KCNQ1DNQ9H478 68 aa9.57□□□□□ -0.88
RPRD1A-202ENST00000399022 KTN1-AS1Q86SY8 53 aa9.57□□□□□ -0.88
RPRD1A-202ENST00000399022 FAM168BA1KXE4 195 aa9.57□□□□□ -0.88
RPRD1A-202ENST00000399022 LY6G6CO95867 125 aa9.57□□□□□ -0.88
RPRD1A-202ENST00000399022 Q8NDZ9 215 aa9.57□□□□□ -0.88
RPRD1A-202ENST00000399022 Q1T7F1 81 aa9.55□□□□□ -0.88
RPRD1A-202ENST00000399022 ATP11AUNQ6ZP68 121 aa9.55□□□□□ -0.88
RPRD1A-202ENST00000399022 LOC101927531A0A1B0GV80 90 aa9.54□□□□□ -0.88
RPRD1A-202ENST00000399022 RETNLBQ9BQ08 111 aa9.53□□□□□ -0.88
RPRD1A-202ENST00000399022 SMG1Q96Q15 3661 aaKnown RBP9.53□□□□□ -0.88
RPRD1A-202ENST00000399022 C15orf56Q8N910 161 aa9.52□□□□□ -0.88
RPRD1A-202ENST00000399022 TP53AIP1Q9HCN2 124 aa9.51□□□□□ -0.89
RPRD1A-202ENST00000399022 NSD1Q96L73 2696 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms