RNA–Protein interactions for RNA: ENST00000398645.6

KDM2A-202, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best) BASIC

Gene KDM2A, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-202ENST00000398645 CSNK1G2-AS1Q8NCQ2 148 aa12.69□□□□□ -0.38
KDM2A-202ENST00000398645 KLKP1Q107X0 134 aa12.68□□□□□ -0.38
KDM2A-202ENST00000398645 FAM104AQ969W3 186 aa12.67□□□□□ -0.38
KDM2A-202ENST00000398645 ZNF861PO60384 105 aa12.67□□□□□ -0.38
KDM2A-202ENST00000398645 KRTAP10-3P60369 221 aa12.67□□□□□ -0.38
KDM2A-202ENST00000398645 IGF2RP11717 2491 aa12.66□□□□□ -0.38
KDM2A-202ENST00000398645 LRRK2Q5S007 2527 aa12.64□□□□□ -0.39
KDM2A-202ENST00000398645 K7EIL1 84 aa12.63□□□□□ -0.39
KDM2A-202ENST00000398645 TTC28Q96AY4 2481 aa12.62□□□□□ -0.39
KDM2A-202ENST00000398645 PRR26Q8N8Z3 221 aa12.62□□□□□ -0.39
KDM2A-202ENST00000398645 PSORS1C2Q9UIG4 136 aa12.62□□□□□ -0.39
KDM2A-202ENST00000398645 WWC2-AS2Q96NR7 200 aa12.61□□□□□ -0.39
KDM2A-202ENST00000398645 C9orf163Q8N9P6 203 aa12.61□□□□□ -0.39
KDM2A-202ENST00000398645 MYO18BQ8IUG5 2567 aa12.6□□□□□ -0.39
KDM2A-202ENST00000398645 A0A1W2PNM2 257 aa12.6□□□□□ -0.39
KDM2A-202ENST00000398645 A0A087WTM6 91 aa12.58□□□□□ -0.4
KDM2A-202ENST00000398645 FAM229BQ4G0N7 80 aa12.58□□□□□ -0.4
KDM2A-202ENST00000398645 PRAC1Q96KF2 57 aa12.57□□□□□ -0.4
KDM2A-202ENST00000398645 RBM12B-AS1Q9P1G2 102 aa12.57□□□□□ -0.4
KDM2A-202ENST00000398645 IGLV7-43P04211 117 aa12.55□□□□□ -0.4
KDM2A-202ENST00000398645 MYO9AB2RTY4 2548 aa12.55□□□□□ -0.4
KDM2A-202ENST00000398645 LUZP6Q538Z0 58 aa12.54□□□□□ -0.4
KDM2A-202ENST00000398645 GIG44P09565 113 aaPredicted RBP12.53□□□□□ -0.4
KDM2A-202ENST00000398645 SPRR4Q96PI1 79 aa12.49□□□□□ -0.41
KDM2A-202ENST00000398645 PRR34Q9NV39 138 aa12.49□□□□□ -0.41
KDM2A-202ENST00000398645 TLN1Q9Y490 2541 aaKnown RBP12.47□□□□□ -0.41
KDM2A-202ENST00000398645 NCOR2Q9Y618 2525 aa12.45□□□□□ -0.42
KDM2A-202ENST00000398645 H3BS24 57 aa12.45□□□□□ -0.42
KDM2A-202ENST00000398645 JMJD1CQ15652 2540 aa12.43□□□□□ -0.42
KDM2A-202ENST00000398645 CAMK2N1Q7Z7J9 78 aa12.42□□□□□ -0.42
KDM2A-202ENST00000398645 Q1T7F1 81 aa12.41□□□□□ -0.42
KDM2A-202ENST00000398645 ABCA12Q86UK0 2595 aa12.38□□□□□ -0.43
KDM2A-202ENST00000398645 LINC00612Q8N6U2 182 aa12.37□□□□□ -0.43
KDM2A-202ENST00000398645 C19orf73Q9NVV2 129 aa12.37□□□□□ -0.43
KDM2A-202ENST00000398645 M0R2T5 61 aa12.36□□□□□ -0.43
KDM2A-202ENST00000398645 CYSTM1Q9H1C7 97 aa12.35□□□□□ -0.43
KDM2A-202ENST00000398645 SPANXA2-OT1Q8N9U9 137 aa12.35□□□□□ -0.43
KDM2A-202ENST00000398645 TLX1NBP0CAT3 122 aa12.35□□□□□ -0.43
KDM2A-202ENST00000398645 CR1P17927 2039 aa12.34□□□□□ -0.43
KDM2A-202ENST00000398645 HRES1P13985 223 aa12.34□□□□□ -0.43
KDM2A-202ENST00000398645 A0A1B0GU33 70 aa12.34□□□□□ -0.43
KDM2A-202ENST00000398645 PLA2G2DQ9UNK4 145 aa12.34□□□□□ -0.43
KDM2A-202ENST00000398645 OCR1Q9BZK8 76 aa12.32□□□□□ -0.44
KDM2A-202ENST00000398645 CSAG1Q6PB30 78 aa12.32□□□□□ -0.44
KDM2A-202ENST00000398645 Q6ZSA8 131 aa12.32□□□□□ -0.44
KDM2A-202ENST00000398645 CNBPP62633 177 aaKnown RBP12.31□□□□□ -0.44
KDM2A-202ENST00000398645 UTRNP46939 3433 aa12.31□□□□□ -0.44
KDM2A-202ENST00000398645 DNAH12Q6ZR08 3092 aa12.28□□□□□ -0.44
KDM2A-202ENST00000398645 TLN2Q9Y4G6 2542 aa12.28□□□□□ -0.44
KDM2A-202ENST00000398645 Q8N9P0 234 aaPredicted RBP12.27□□□□□ -0.45
KDM2A-202ENST00000398645 LINC00483Q53H64 154 aa12.27□□□□□ -0.45
KDM2A-202ENST00000398645 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.27□□□□□ -0.45
KDM2A-202ENST00000398645 TNP2Q05952 138 aa12.26□□□□□ -0.45
KDM2A-202ENST00000398645 ZFYVE26Q68DK2 2539 aa12.25□□□□□ -0.45
KDM2A-202ENST00000398645 SETD2Q9BYW2 2564 aaPredicted RBP12.24□□□□□ -0.45
KDM2A-202ENST00000398645 Q5XG85 94 aa12.24□□□□□ -0.45
KDM2A-202ENST00000398645 SPINK7P58062 85 aa12.2□□□□□ -0.46
KDM2A-202ENST00000398645 KLK9Q2XQG4 91 aa12.2□□□□□ -0.46
KDM2A-202ENST00000398645 Q75L30 129 aa12.19□□□□□ -0.46
KDM2A-202ENST00000398645 IGLV7-46A0A075B6I9 117 aa12.19□□□□□ -0.46
KDM2A-202ENST00000398645 S4R3F8 94 aa12.18□□□□□ -0.46
KDM2A-202ENST00000398645 ANKRD17O75179 2603 aaKnown RBP12.17□□□□□ -0.46
KDM2A-202ENST00000398645 ZNF462Q96JM2 2506 aa12.15□□□□□ -0.46
KDM2A-202ENST00000398645 A0A096LNT2 108 aa12.15□□□□□ -0.47
KDM2A-202ENST00000398645 Q8NDZ9 215 aa12.12□□□□□ -0.47
KDM2A-202ENST00000398645 FP248Q71RG6 208 aaPredicted RBP12.12□□□□□ -0.47
KDM2A-202ENST00000398645 C5orf42Q9H799 3197 aa12.1□□□□□ -0.47
KDM2A-202ENST00000398645 Q5VV11 94 aa12.09□□□□□ -0.47
KDM2A-202ENST00000398645 PKD1L2Q7Z442 2459 aa12.08□□□□□ -0.48
KDM2A-202ENST00000398645 USP9XQ93008 2570 aaPredicted RBP12.07□□□□□ -0.48
KDM2A-202ENST00000398645 MMP24-AS1A0A0U1RRL7 71 aa12.06□□□□□ -0.48
KDM2A-202ENST00000398645 ACANP16112 2415 aa12.04□□□□□ -0.48
KDM2A-202ENST00000398645 F8P00451 2351 aa12.03□□□□□ -0.48
KDM2A-202ENST00000398645 ZCCHC13Q8WW36 166 aaKnown RBP12.01□□□□□ -0.49
KDM2A-202ENST00000398645 Q5W150 140 aa12.01□□□□□ -0.49
KDM2A-202ENST00000398645 LINC01558Q9Y6Z2 57 aa12□□□□□ -0.49
KDM2A-202ENST00000398645 POLQO75417 2590 aa11.98□□□□□ -0.49
KDM2A-202ENST00000398645 DMAC1Q96GE9 116 aa11.97□□□□□ -0.49
KDM2A-202ENST00000398645 KRTAP1-3Q8IUG1 177 aa11.95□□□□□ -0.5
KDM2A-202ENST00000398645 SPATA8Q6RVD6 105 aa11.94□□□□□ -0.5
KDM2A-202ENST00000398645 OXTP01178 125 aa11.94□□□□□ -0.5
KDM2A-202ENST00000398645 A0A0A0MQY5 61 aa11.93□□□□□ -0.5
KDM2A-202ENST00000398645 R4GN34 69 aa11.92□□□□□ -0.5
KDM2A-202ENST00000398645 BPTFQ12830 3046 aa11.91□□□□□ -0.5
KDM2A-202ENST00000398645 PCNTO95613 3336 aa11.9□□□□□ -0.5
KDM2A-202ENST00000398645 ANKRD11Q6UB99 2663 aaPredicted RBP11.88□□□□□ -0.51
KDM2A-202ENST00000398645 KRTAP1-1Q07627 177 aa11.85□□□□□ -0.51
KDM2A-202ENST00000398645 MTORP42345 2549 aa11.82□□□□□ -0.52
KDM2A-202ENST00000398645 ROMO1P60602 79 aa11.82□□□□□ -0.52
KDM2A-202ENST00000398645 M0QZ58 72 aa11.81□□□□□ -0.52
KDM2A-202ENST00000398645 USP9YO00507 2555 aaPredicted RBP11.78□□□□□ -0.52
KDM2A-202ENST00000398645 H1FX-AS1Q4G0G2 97 aa11.77□□□□□ -0.53
KDM2A-202ENST00000398645 CHD8Q9HCK8 2581 aa11.77□□□□□ -0.53
KDM2A-202ENST00000398645 SPTBN4Q9H254 2564 aa11.77□□□□□ -0.53
KDM2A-202ENST00000398645 ADM2Q7Z4H4 148 aa11.75□□□□□ -0.53
KDM2A-202ENST00000398645 LINC00472Q9H8W2 130 aa11.73□□□□□ -0.53
KDM2A-202ENST00000398645 CEP350Q5VT06 3117 aa11.73□□□□□ -0.53
KDM2A-202ENST00000398645 KRTAP26-1Q6PEX3 210 aa11.73□□□□□ -0.53
KDM2A-202ENST00000398645 PLAC8Q9NZF1 115 aa11.7□□□□□ -0.54
KDM2A-202ENST00000398645 RPL37P61927 97 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms