RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 Q1T7F1 81 aa8.19□□□□□ -1.1
SMU1-201ENST00000397149 PCNTO95613 3336 aa8.18□□□□□ -1.1
SMU1-201ENST00000397149 ZNF861PO60384 105 aa8.17□□□□□ -1.1
SMU1-201ENST00000397149 C15orf56Q8N910 161 aa8.17□□□□□ -1.1
SMU1-201ENST00000397149 CENPFP49454 3210 aa8.17□□□□□ -1.1
SMU1-201ENST00000397149 H3BNG1 76 aa8.17□□□□□ -1.1
SMU1-201ENST00000397149 ABCA12Q86UK0 2595 aa8.16□□□□□ -1.1
SMU1-201ENST00000397149 COX8CQ7Z4L0 72 aa8.16□□□□□ -1.1
SMU1-201ENST00000397149 ADAMTS20P59510 1910 aa8.15□□□□□ -1.1
SMU1-201ENST00000397149 Q8NAQ8 132 aa8.15□□□□□ -1.11
SMU1-201ENST00000397149 A0A0A0MQY5 61 aa8.14□□□□□ -1.11
SMU1-201ENST00000397149 PKD1L2Q7Z442 2459 aa8.14□□□□□ -1.11
SMU1-201ENST00000397149 CPAMD8Q8IZJ3 1885 aa8.13□□□□□ -1.11
SMU1-201ENST00000397149 PRR26Q8N8Z3 221 aa8.12□□□□□ -1.11
SMU1-201ENST00000397149 PRO0461Q9UI25 63 aa8.11□□□□□ -1.11
SMU1-201ENST00000397149 DNAH12Q6ZR08 3092 aa8.11□□□□□ -1.11
SMU1-201ENST00000397149 C9orf163Q8N9P6 203 aa8.11□□□□□ -1.11
SMU1-201ENST00000397149 MUC22E2RYF6 1773 aaPredicted RBP8.09□□□□□ -1.11
SMU1-201ENST00000397149 NCOR2Q9Y618 2525 aa8.08□□□□□ -1.12
SMU1-201ENST00000397149 PIEZO1Q92508 2521 aa8.08□□□□□ -1.12
SMU1-201ENST00000397149 Q8N377 158 aa8.08□□□□□ -1.12
SMU1-201ENST00000397149 H3BS24 57 aa8.08□□□□□ -1.12
SMU1-201ENST00000397149 LINC00528Q8N1L1 170 aa8.08□□□□□ -1.12
SMU1-201ENST00000397149 IGLV7-43P04211 117 aa8.07□□□□□ -1.12
SMU1-201ENST00000397149 A0A087WTM6 91 aa8.06□□□□□ -1.12
SMU1-201ENST00000397149 KCNQ1DNQ9H478 68 aa8.06□□□□□ -1.12
SMU1-201ENST00000397149 IGF2RP11717 2491 aa8.06□□□□□ -1.12
SMU1-201ENST00000397149 PSORS1C2Q9UIG4 136 aa8.06□□□□□ -1.12
SMU1-201ENST00000397149 A0A1B0GU33 70 aa8.05□□□□□ -1.12
SMU1-201ENST00000397149 SETD2Q9BYW2 2564 aaPredicted RBP8.05□□□□□ -1.12
SMU1-201ENST00000397149 SPINK7P58062 85 aa8.05□□□□□ -1.12
SMU1-201ENST00000397149 LINC01546A6NGU7 62 aa8.04□□□□□ -1.12
SMU1-201ENST00000397149 IGLV7-46A0A075B6I9 117 aa8.03□□□□□ -1.12
SMU1-201ENST00000397149 FLG2Q5D862 2391 aaPredicted RBP8.03□□□□□ -1.12
SMU1-201ENST00000397149 COL27A1Q8IZC6 1860 aaPredicted RBP8□□□□□ -1.13
SMU1-201ENST00000397149 K7EIL1 84 aa8□□□□□ -1.13
SMU1-201ENST00000397149 KRTAP10-11P60412 298 aa7.99□□□□□ -1.13
SMU1-201ENST00000397149 PLAC4Q8WY50 150 aa7.99□□□□□ -1.13
SMU1-201ENST00000397149 PRAC1Q96KF2 57 aa7.99□□□□□ -1.13
SMU1-201ENST00000397149 H1FX-AS1Q4G0G2 97 aa7.99□□□□□ -1.13
SMU1-201ENST00000397149 H7BZZ5 65 aa7.98□□□□□ -1.13
SMU1-201ENST00000397149 KLKP1Q107X0 134 aa7.97□□□□□ -1.13
SMU1-201ENST00000397149 LITAFQ99732 161 aa7.96□□□□□ -1.13
SMU1-201ENST00000397149 SPRR4Q96PI1 79 aa7.96□□□□□ -1.14
SMU1-201ENST00000397149 WDR87Q6ZQQ6 2873 aa7.96□□□□□ -1.14
SMU1-201ENST00000397149 USP9XQ93008 2570 aaPredicted RBP7.95□□□□□ -1.14
SMU1-201ENST00000397149 HRES1P13985 223 aa7.95□□□□□ -1.14
SMU1-201ENST00000397149 S4R3F8 94 aa7.95□□□□□ -1.14
SMU1-201ENST00000397149 EIF4EBP3O60516 100 aaPredicted RBP7.95□□□□□ -1.14
SMU1-201ENST00000397149 CASC10Q5T4H9 136 aa7.94□□□□□ -1.14
SMU1-201ENST00000397149 LINC00612Q8N6U2 182 aa7.94□□□□□ -1.14
SMU1-201ENST00000397149 R4GN34 69 aa7.93□□□□□ -1.14
SMU1-201ENST00000397149 CSAG1Q6PB30 78 aa7.91□□□□□ -1.14
SMU1-201ENST00000397149 CR1P17927 2039 aa7.9□□□□□ -1.14
SMU1-201ENST00000397149 A0A1W2PNM2 257 aa7.88□□□□□ -1.15
SMU1-201ENST00000397149 SPANXA2-OT1Q8N9U9 137 aa7.87□□□□□ -1.15
SMU1-201ENST00000397149 C5orf42Q9H799 3197 aa7.87□□□□□ -1.15
SMU1-201ENST00000397149 CEP350Q5VT06 3117 aa7.86□□□□□ -1.15
SMU1-201ENST00000397149 DMAC1Q96GE9 116 aa7.85□□□□□ -1.15
SMU1-201ENST00000397149 MTORP42345 2549 aa7.85□□□□□ -1.15
SMU1-201ENST00000397149 TNP2Q05952 138 aa7.83□□□□□ -1.16
SMU1-201ENST00000397149 SPTBN4Q9H254 2564 aa7.83□□□□□ -1.16
SMU1-201ENST00000397149 Q5VSD8 79 aa7.82□□□□□ -1.16
SMU1-201ENST00000397149 PRR34Q9NV39 138 aa7.8□□□□□ -1.16
SMU1-201ENST00000397149 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.8□□□□□ -1.16
SMU1-201ENST00000397149 Q8N9P0 234 aaPredicted RBP7.78□□□□□ -1.16
SMU1-201ENST00000397149 POLQO75417 2590 aa7.77□□□□□ -1.17
SMU1-201ENST00000397149 M0QZ58 72 aa7.77□□□□□ -1.17
SMU1-201ENST00000397149 USP9YO00507 2555 aaPredicted RBP7.77□□□□□ -1.17
SMU1-201ENST00000397149 USP24Q9UPU5 2620 aa7.76□□□□□ -1.17
SMU1-201ENST00000397149 GIG44P09565 113 aaPredicted RBP7.75□□□□□ -1.17
SMU1-201ENST00000397149 C19orf73Q9NVV2 129 aa7.75□□□□□ -1.17
SMU1-201ENST00000397149 BRCA2P51587 3418 aa7.74□□□□□ -1.17
SMU1-201ENST00000397149 ZCCHC13Q8WW36 166 aaKnown RBP7.74□□□□□ -1.17
SMU1-201ENST00000397149 KRTAP10-3P60369 221 aa7.73□□□□□ -1.17
SMU1-201ENST00000397149 FAM229BQ4G0N7 80 aa7.72□□□□□ -1.17
SMU1-201ENST00000397149 Q75L30 129 aa7.72□□□□□ -1.17
SMU1-201ENST00000397149 ANKRD17O75179 2603 aaKnown RBP7.7□□□□□ -1.18
SMU1-201ENST00000397149 CNBPP62633 177 aaKnown RBP7.7□□□□□ -1.18
SMU1-201ENST00000397149 MKI67P46013 3256 aaKnown RBP7.69□□□□□ -1.18
SMU1-201ENST00000397149 CHD8Q9HCK8 2581 aa7.69□□□□□ -1.18
SMU1-201ENST00000397149 ROMO1P60602 79 aa7.69□□□□□ -1.18
SMU1-201ENST00000397149 OCR1Q9BZK8 76 aa7.67□□□□□ -1.18
SMU1-201ENST00000397149 C10orf142B7Z368 130 aa7.67□□□□□ -1.18
SMU1-201ENST00000397149 FP248Q71RG6 208 aaPredicted RBP7.67□□□□□ -1.18
SMU1-201ENST00000397149 C20orf166-AS1Q96NR2 134 aa7.66□□□□□ -1.18
SMU1-201ENST00000397149 PCSK5Q92824 1860 aa7.66□□□□□ -1.18
SMU1-201ENST00000397149 SEC61BP60468 96 aaKnown RBP7.65□□□□□ -1.18
SMU1-201ENST00000397149 RPL37P61927 97 aaKnown RBP7.65□□□□□ -1.18
SMU1-201ENST00000397149 LINC01558Q9Y6Z2 57 aa7.65□□□□□ -1.18
SMU1-201ENST00000397149 KLK9Q2XQG4 91 aa7.63□□□□□ -1.19
SMU1-201ENST00000397149 ADM2Q7Z4H4 148 aa7.62□□□□□ -1.19
SMU1-201ENST00000397149 SPATA8Q6RVD6 105 aa7.62□□□□□ -1.19
SMU1-201ENST00000397149 Q5W150 140 aa7.61□□□□□ -1.19
SMU1-201ENST00000397149 XIRP2A4UGR9 3374 aa7.6□□□□□ -1.19
SMU1-201ENST00000397149 KRTAP16-1A8MUX0 517 aa7.6□□□□□ -1.19
SMU1-201ENST00000397149 COL4A2P08572 1712 aa7.6□□□□□ -1.19
SMU1-201ENST00000397149 BPTFQ12830 3046 aa7.59□□□□□ -1.19
SMU1-201ENST00000397149 FASNP49327 2511 aaKnown RBP7.58□□□□□ -1.2
SMU1-201ENST00000397149 LAMA3Q16787 3333 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms