RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 ABCA12Q86UK0 2595 aa10.13□□□□□ -0.79
GNE-202ENST00000396594 ANKRD11Q6UB99 2663 aaPredicted RBP10.11□□□□□ -0.79
GNE-202ENST00000396594 UQCR11O14957 56 aa10.11□□□□□ -0.79
GNE-202ENST00000396594 RBM12B-AS1Q9P1G2 102 aa10.1□□□□□ -0.79
GNE-202ENST00000396594 OBSCN-AS1Q96MR7 158 aa10.1□□□□□ -0.79
GNE-202ENST00000396594 COA5Q86WW8 74 aa10.1□□□□□ -0.79
GNE-202ENST00000396594 ZNF462Q96JM2 2506 aa10.09□□□□□ -0.79
GNE-202ENST00000396594 USP9XQ93008 2570 aaPredicted RBP10.08□□□□□ -0.8
GNE-202ENST00000396594 PSORS1C2Q9UIG4 136 aa10.08□□□□□ -0.8
GNE-202ENST00000396594 A8MUN3 132 aa10.06□□□□□ -0.8
GNE-202ENST00000396594 FAM104AQ969W3 186 aa10.04□□□□□ -0.8
GNE-202ENST00000396594 ANKRD17O75179 2603 aaKnown RBP10.02□□□□□ -0.81
GNE-202ENST00000396594 DSCR10P59022 87 aa10.02□□□□□ -0.81
GNE-202ENST00000396594 A0A1W2PNN7 141 aa10.01□□□□□ -0.81
GNE-202ENST00000396594 COX6B2Q6YFQ2 88 aa10□□□□□ -0.81
GNE-202ENST00000396594 FN1P02751 2386 aaKnown RBP9.99□□□□□ -0.81
GNE-202ENST00000396594 A0A1W2PNM2 257 aa9.97□□□□□ -0.81
GNE-202ENST00000396594 PLAC8Q9NZF1 115 aa9.96□□□□□ -0.81
GNE-202ENST00000396594 JMJD1CQ15652 2540 aa9.95□□□□□ -0.82
GNE-202ENST00000396594 ZFYVE26Q68DK2 2539 aa9.94□□□□□ -0.82
GNE-202ENST00000396594 CEP295Q9C0D2 2601 aa9.93□□□□□ -0.82
GNE-202ENST00000396594 EIF4EBP3O60516 100 aaPredicted RBP9.93□□□□□ -0.82
GNE-202ENST00000396594 SPRR1BP22528 89 aa9.93□□□□□ -0.82
GNE-202ENST00000396594 USP9YO00507 2555 aaPredicted RBP9.91□□□□□ -0.82
GNE-202ENST00000396594 SPRR1AP35321 89 aa9.91□□□□□ -0.82
GNE-202ENST00000396594 MIR22HGQ0VDD5 57 aa9.9□□□□□ -0.82
GNE-202ENST00000396594 IGLV8-61A0A075B6I0 122 aa9.89□□□□□ -0.83
GNE-202ENST00000396594 PKD1L2Q7Z442 2459 aa9.89□□□□□ -0.83
GNE-202ENST00000396594 TLN2Q9Y4G6 2542 aa9.88□□□□□ -0.83
GNE-202ENST00000396594 H7BZZ5 65 aa9.87□□□□□ -0.83
GNE-202ENST00000396594 CASC10Q5T4H9 136 aa9.87□□□□□ -0.83
GNE-202ENST00000396594 CRIPTQ9P021 101 aa9.85□□□□□ -0.83
GNE-202ENST00000396594 C4orf26Q17RF5 130 aa9.83□□□□□ -0.84
GNE-202ENST00000396594 TNP2Q05952 138 aa9.79□□□□□ -0.84
GNE-202ENST00000396594 OCR1Q9BZK8 76 aa9.79□□□□□ -0.84
GNE-202ENST00000396594 C9orf92A6NGG3 77 aa9.77□□□□□ -0.85
GNE-202ENST00000396594 EP400Q96L91 3159 aa9.77□□□□□ -0.85
GNE-202ENST00000396594 IGLV7-46A0A075B6I9 117 aa9.76□□□□□ -0.85
GNE-202ENST00000396594 Q6ZSA8 131 aa9.76□□□□□ -0.85
GNE-202ENST00000396594 F8P00451 2351 aa9.74□□□□□ -0.85
GNE-202ENST00000396594 SMR3BP02814 79 aaPredicted RBP9.73□□□□□ -0.85
GNE-202ENST00000396594 CDC42SE1Q9NRR8 79 aa9.73□□□□□ -0.85
GNE-202ENST00000396594 SPTBN4Q9H254 2564 aa9.72□□□□□ -0.85
GNE-202ENST00000396594 Q1T7F1 81 aa9.72□□□□□ -0.85
GNE-202ENST00000396594 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.7□□□□□ -0.86
GNE-202ENST00000396594 ZCCHC13Q8WW36 166 aaKnown RBP9.69□□□□□ -0.86
GNE-202ENST00000396594 SPINT4Q6UDR6 99 aa9.68□□□□□ -0.86
GNE-202ENST00000396594 FP248Q71RG6 208 aaPredicted RBP9.67□□□□□ -0.86
GNE-202ENST00000396594 CHD8Q9HCK8 2581 aa9.67□□□□□ -0.86
GNE-202ENST00000396594 LCE6AA0A183 80 aa9.66□□□□□ -0.86
GNE-202ENST00000396594 MTORP42345 2549 aa9.66□□□□□ -0.86
GNE-202ENST00000396594 ANAPC11Q9NYG5 84 aa9.65□□□□□ -0.86
GNE-202ENST00000396594 CR1P17927 2039 aa9.65□□□□□ -0.87
GNE-202ENST00000396594 LINC00483Q53H64 154 aa9.64□□□□□ -0.87
GNE-202ENST00000396594 MMP24-AS1A0A0U1RRL7 71 aa9.64□□□□□ -0.87
GNE-202ENST00000396594 HRES1P13985 223 aa9.64□□□□□ -0.87
GNE-202ENST00000396594 SEC61BP60468 96 aaKnown RBP9.63□□□□□ -0.87
GNE-202ENST00000396594 KTN1-AS1Q86SY8 53 aa9.62□□□□□ -0.87
GNE-202ENST00000396594 KRTAP26-1Q6PEX3 210 aa9.61□□□□□ -0.87
GNE-202ENST00000396594 LCA10Q71F78 164 aa9.61□□□□□ -0.87
GNE-202ENST00000396594 LINC00472Q9H8W2 130 aa9.59□□□□□ -0.87
GNE-202ENST00000396594 PRR26Q8N8Z3 221 aa9.59□□□□□ -0.87
GNE-202ENST00000396594 Q75L30 129 aa9.58□□□□□ -0.88
GNE-202ENST00000396594 RPS29P62273 56 aaKnown RBP9.57□□□□□ -0.88
GNE-202ENST00000396594 KRTAP21-3Q3LHN1 58 aa9.57□□□□□ -0.88
GNE-202ENST00000396594 CSAG1Q6PB30 78 aa9.57□□□□□ -0.88
GNE-202ENST00000396594 LINC01558Q9Y6Z2 57 aa9.57□□□□□ -0.88
GNE-202ENST00000396594 A0A0G2JQZ4 141 aa9.56□□□□□ -0.88
GNE-202ENST00000396594 DMAC1Q96GE9 116 aa9.56□□□□□ -0.88
GNE-202ENST00000396594 FASNP49327 2511 aaKnown RBP9.55□□□□□ -0.88
GNE-202ENST00000396594 OXTP01178 125 aa9.55□□□□□ -0.88
GNE-202ENST00000396594 ACANP16112 2415 aa9.53□□□□□ -0.88
GNE-202ENST00000396594 A0A1B0GU33 70 aa9.52□□□□□ -0.89
GNE-202ENST00000396594 Q8N1X5 172 aa9.52□□□□□ -0.89
GNE-202ENST00000396594 ASB16-AS1Q495Z4 193 aa9.49□□□□□ -0.89
GNE-202ENST00000396594 S4R3F8 94 aa9.49□□□□□ -0.89
GNE-202ENST00000396594 POLQO75417 2590 aa9.49□□□□□ -0.89
GNE-202ENST00000396594 Q6ZR54 194 aa9.48□□□□□ -0.89
GNE-202ENST00000396594 SETD2Q9BYW2 2564 aaPredicted RBP9.48□□□□□ -0.89
GNE-202ENST00000396594 Q5W150 140 aa9.44□□□□□ -0.9
GNE-202ENST00000396594 EPG5Q9HCE0 2579 aa9.41□□□□□ -0.9
GNE-202ENST00000396594 Q5VSD8 79 aa9.4□□□□□ -0.9
GNE-202ENST00000396594 KRTAP4-16G5E9R7 235 aaPredicted RBP9.4□□□□□ -0.9
GNE-202ENST00000396594 Q8NDZ9 215 aa9.39□□□□□ -0.91
GNE-202ENST00000396594 KRTAP1-5Q9BYS1 174 aa9.38□□□□□ -0.91
GNE-202ENST00000396594 WDR87Q6ZQQ6 2873 aa9.38□□□□□ -0.91
GNE-202ENST00000396594 CAMK2N1Q7Z7J9 78 aa9.38□□□□□ -0.91
GNE-202ENST00000396594 LUZP6Q538Z0 58 aa9.36□□□□□ -0.91
GNE-202ENST00000396594 SPINK7P58062 85 aa9.35□□□□□ -0.91
GNE-202ENST00000396594 Q5XG85 94 aa9.35□□□□□ -0.91
GNE-202ENST00000396594 Q8N9P0 234 aaPredicted RBP9.35□□□□□ -0.91
GNE-202ENST00000396594 KRTAP10-1P60331 282 aa9.33□□□□□ -0.92
GNE-202ENST00000396594 LINC01554Q52M75 96 aa9.31□□□□□ -0.92
GNE-202ENST00000396594 A0A0D9SG42 100 aa9.3□□□□□ -0.92
GNE-202ENST00000396594 M0R2T5 61 aa9.28□□□□□ -0.92
GNE-202ENST00000396594 KRTAP29-1A8MX34 341 aaPredicted RBP9.23□□□□□ -0.93
GNE-202ENST00000396594 FLNAP21333 2647 aaKnown RBP9.22□□□□□ -0.93
GNE-202ENST00000396594 KRTAP10-2P60368 255 aa9.22□□□□□ -0.93
GNE-202ENST00000396594 R4GN34 69 aa9.21□□□□□ -0.94
GNE-202ENST00000396594 Q6ZRN7 208 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms