RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 FAM240AA0A1B0GVK7 77 aa9.7□□□□□ -0.86
SCAF11-204ENST00000395454 ZNF73O43830 326 aaPredicted RBP9.7□□□□□ -0.86
SCAF11-204ENST00000395454 FUSP35637 526 aaKnown RBP eCLIP9.7□□□□□ -0.86
SCAF11-204ENST00000395454 DIRC1Q969H9 104 aa9.7□□□□□ -0.86
SCAF11-204ENST00000395454 ORMDL1Q9P0S3 153 aa9.7□□□□□ -0.86
SCAF11-204ENST00000395454 LOC107984640A0A0U1RRK4 108 aa9.69□□□□□ -0.86
SCAF11-204ENST00000395454 DNAH5Q8TE73 4624 aa9.69□□□□□ -0.86
SCAF11-204ENST00000395454 SERTAD4-AS1Q5TG53 156 aa9.68□□□□□ -0.86
SCAF11-204ENST00000395454 ELOF1P60002 83 aaKnown RBP9.68□□□□□ -0.86
SCAF11-204ENST00000395454 SNCGO76070 127 aa9.67□□□□□ -0.86
SCAF11-204ENST00000395454 KRTAP10-2P60368 255 aa9.67□□□□□ -0.86
SCAF11-204ENST00000395454 KCNQ1DNQ9H478 68 aa9.67□□□□□ -0.86
SCAF11-204ENST00000395454 INAFM2P0DMQ5 153 aa9.66□□□□□ -0.86
SCAF11-204ENST00000395454 KRTAP7-1Q8IUC3 87 aa9.66□□□□□ -0.86
SCAF11-204ENST00000395454 C7orf33Q8WU49 177 aa9.66□□□□□ -0.86
SCAF11-204ENST00000395454 IGLV5-52A0A0A0MRZ9 124 aa9.65□□□□□ -0.86
SCAF11-204ENST00000395454 hADV29S1A0JD25 119 aa9.65□□□□□ -0.86
SCAF11-204ENST00000395454 NKAPP1Q8N9T2 125 aa9.65□□□□□ -0.86
SCAF11-204ENST00000395454 A0A1B0GVY2 172 aa9.64□□□□□ -0.87
SCAF11-204ENST00000395454 TMEM256-PLSCR3K7ERE1 68 aa9.64□□□□□ -0.87
SCAF11-204ENST00000395454 COX7BP24311 80 aa9.64□□□□□ -0.87
SCAF11-204ENST00000395454 LINC00528Q8N1L1 170 aa9.63□□□□□ -0.87
SCAF11-204ENST00000395454 C16orf90A8MZG2 172 aa9.62□□□□□ -0.87
SCAF11-204ENST00000395454 H3BQ85 93 aa9.62□□□□□ -0.87
SCAF11-204ENST00000395454 SIGMAR1Q99720 223 aa9.62□□□□□ -0.87
SCAF11-204ENST00000395454 FAM168BA1KXE4 195 aa9.61□□□□□ -0.87
SCAF11-204ENST00000395454 ACYP1P07311 99 aa9.61□□□□□ -0.87
SCAF11-204ENST00000395454 GAGE2BQ13066 116 aa9.61□□□□□ -0.87
SCAF11-204ENST00000395454 IGLV1-50A0A075B6I6 118 aa9.6□□□□□ -0.87
SCAF11-204ENST00000395454 SPRR1AP35321 89 aa9.6□□□□□ -0.87
SCAF11-204ENST00000395454 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.6□□□□□ -0.87
SCAF11-204ENST00000395454 EPPK1P58107 5090 aaKnown RBP9.6□□□□□ -0.87
SCAF11-204ENST00000395454 KRTAP4-16G5E9R7 235 aaPredicted RBP9.6□□□□□ -0.87
SCAF11-204ENST00000395454 PRYO14603 147 aa9.6□□□□□ -0.87
SCAF11-204ENST00000395454 C9orf163Q8N9P6 203 aa9.6□□□□□ -0.87
SCAF11-204ENST00000395454 JMJD7-PLA2G4BH0Y9G9 81 aa9.59□□□□□ -0.87
SCAF11-204ENST00000395454 A0A096LNI7 61 aa9.58□□□□□ -0.88
SCAF11-204ENST00000395454 XGP55808 180 aa9.58□□□□□ -0.88
SCAF11-204ENST00000395454 SDIM1Q6ZPB5 146 aa9.58□□□□□ -0.88
SCAF11-204ENST00000395454 PKIGQ9Y2B9 76 aa9.58□□□□□ -0.88
SCAF11-204ENST00000395454 LRP1BQ9NZR2 4599 aa9.58□□□□□ -0.88
SCAF11-204ENST00000395454 Q6ZQY7 126 aa9.58□□□□□ -0.88
SCAF11-204ENST00000395454 MRPL55Q7Z7F7 128 aaKnown RBP9.58□□□□□ -0.88
SCAF11-204ENST00000395454 GHRHP01286 108 aa9.56□□□□□ -0.88
SCAF11-204ENST00000395454 C14orf132Q9NPU4 83 aa9.55□□□□□ -0.88
SCAF11-204ENST00000395454 DYNC1H1Q14204 4646 aaKnown RBP9.55□□□□□ -0.88
SCAF11-204ENST00000395454 FAM19A5Q7Z5A7 132 aaPredicted RBP9.54□□□□□ -0.88
SCAF11-204ENST00000395454 SCGB1A1P11684 91 aa9.54□□□□□ -0.88
SCAF11-204ENST00000395454 Q6ZRX8 168 aa9.54□□□□□ -0.88
SCAF11-204ENST00000395454 B5MCH6 92 aa9.53□□□□□ -0.88
SCAF11-204ENST00000395454 MT-ATP8P03928 68 aa9.53□□□□□ -0.88
SCAF11-204ENST00000395454 IGKV2-24A0A0C4DH68 120 aa9.52□□□□□ -0.89
SCAF11-204ENST00000395454 RPL37AP8A6NKH3 93 aa9.52□□□□□ -0.89
SCAF11-204ENST00000395454 KRTAP10-1P60331 282 aa9.52□□□□□ -0.89
SCAF11-204ENST00000395454 A0A1W2PNN7 141 aa9.51□□□□□ -0.89
SCAF11-204ENST00000395454 DHRS4-AS1Q9P1J3 65 aa9.51□□□□□ -0.89
SCAF11-204ENST00000395454 LOC110117498A0A087WWA1 95 aa9.5□□□□□ -0.89
SCAF11-204ENST00000395454 CCKP06307 115 aa9.5□□□□□ -0.89
SCAF11-204ENST00000395454 GAGE2AQ6NT46 116 aa9.5□□□□□ -0.89
SCAF11-204ENST00000395454 CHTF8P0CG12 524 aa9.49□□□□□ -0.89
SCAF11-204ENST00000395454 LINC00474Q9P2X8 69 aa9.49□□□□□ -0.89
SCAF11-204ENST00000395454 EPM2AB3EWF7 344 aa9.48□□□□□ -0.89
SCAF11-204ENST00000395454 Q9BRP9 147 aa9.48□□□□□ -0.89
SCAF11-204ENST00000395454 DNAH8Q96JB1 4490 aa9.48□□□□□ -0.89
SCAF11-204ENST00000395454 REG3GQ6UW15 175 aa9.48□□□□□ -0.89
SCAF11-204ENST00000395454 SMCR5Q8TEV8 140 aa9.48□□□□□ -0.89
SCAF11-204ENST00000395454 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.48□□□□□ -0.89
SCAF11-204ENST00000395454 ETDCA0A1B0GVM5 59 aa9.47□□□□□ -0.89
SCAF11-204ENST00000395454 PCP4P48539 62 aa9.47□□□□□ -0.89
SCAF11-204ENST00000395454 RBM3P98179 157 aaKnown RBP9.47□□□□□ -0.89
SCAF11-204ENST00000395454 DPH3Q96FX2 82 aa9.47□□□□□ -0.89
SCAF11-204ENST00000395454 PANO1I0J062 215 aa9.46□□□□□ -0.89
SCAF11-204ENST00000395454 FAM30AQ9NZY2 134 aa9.46□□□□□ -0.89
SCAF11-204ENST00000395454 Q6ZQT0 140 aa9.46□□□□□ -0.9
SCAF11-204ENST00000395454 LINC00643Q86TS7 51 aa9.46□□□□□ -0.9
SCAF11-204ENST00000395454 PDE6GP18545 87 aa9.45□□□□□ -0.9
SCAF11-204ENST00000395454 LINC01547P58512 204 aaPredicted RBP9.45□□□□□ -0.9
SCAF11-204ENST00000395454 Q6Q795 121 aa9.45□□□□□ -0.9
SCAF11-204ENST00000395454 LAMTOR3Q9UHA4 124 aa9.45□□□□□ -0.9
SCAF11-204ENST00000395454 APOBP04114 4563 aaKnown RBP9.45□□□□□ -0.9
SCAF11-204ENST00000395454 IGLV5-48A0A075B6I7 105 aa9.44□□□□□ -0.9
SCAF11-204ENST00000395454 SPACA4Q8TDM5 124 aa9.44□□□□□ -0.9
SCAF11-204ENST00000395454 TRBV7-4A0A0J9YYF1 115 aa9.44□□□□□ -0.9
SCAF11-204ENST00000395454 TRBV7-7A0A0K0K1E9 115 aa9.44□□□□□ -0.9
SCAF11-204ENST00000395454 NDUFV3P56181 108 aaKnown RBP9.44□□□□□ -0.9
SCAF11-204ENST00000395454 Q6ZSA8 131 aa9.44□□□□□ -0.9
SCAF11-204ENST00000395454 HAMPP81172 84 aa9.43□□□□□ -0.9
SCAF11-204ENST00000395454 C21orf62-AS1Q17RA5 79 aa9.43□□□□□ -0.9
SCAF11-204ENST00000395454 LINC00846Q9NV44 126 aa9.43□□□□□ -0.9
SCAF11-204ENST00000395454 A0A1B0GV72 72 aa9.42□□□□□ -0.9
SCAF11-204ENST00000395454 Q8N377 158 aa9.42□□□□□ -0.9
SCAF11-204ENST00000395454 DSCR8Q96T75 97 aa9.41□□□□□ -0.9
SCAF11-204ENST00000395454 H0Y9J4 135 aa9.41□□□□□ -0.9
SCAF11-204ENST00000395454 SCXQ7RTU7 201 aa9.4□□□□□ -0.9
SCAF11-204ENST00000395454 IMUPQ9GZP8 106 aa9.4□□□□□ -0.9
SCAF11-204ENST00000395454 PHF5AQ7RTV0 110 aaKnown RBP9.39□□□□□ -0.91
SCAF11-204ENST00000395454 CIRBP-AS1Q8TBR5 109 aa9.39□□□□□ -0.91
SCAF11-204ENST00000395454 KRTAP11-1Q8IUC1 163 aa9.39□□□□□ -0.91
SCAF11-204ENST00000395454 ERC2-IT1O76042 136 aa9.38□□□□□ -0.91
SCAF11-204ENST00000395454 UBE2BP63146 152 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 337.8 ms