RNA–Protein interactions for RNA: ENST00000394744.6

RAB11FIP4-201, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2 BASIC

Gene RAB11FIP4, Length 1,968 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-201ENST00000394744 LAMTOR3Q9UHA4 124 aa12.8□□□□□ -0.36
RAB11FIP4-201ENST00000394744 RPL37AP8A6NKH3 93 aa12.78□□□□□ -0.36
RAB11FIP4-201ENST00000394744 H3BQ85 93 aa12.78□□□□□ -0.36
RAB11FIP4-201ENST00000394744 LINC00846Q9NV44 126 aa12.78□□□□□ -0.36
RAB11FIP4-201ENST00000394744 STARD9Q9P2P6 4700 aa12.77□□□□□ -0.37
RAB11FIP4-201ENST00000394744 TRBV7-7A0A0K0K1E9 115 aa12.77□□□□□ -0.37
RAB11FIP4-201ENST00000394744 FAM19A5Q7Z5A7 132 aaPredicted RBP12.77□□□□□ -0.37
RAB11FIP4-201ENST00000394744 CNBPP62633 177 aaKnown RBP12.76□□□□□ -0.37
RAB11FIP4-201ENST00000394744 RBM3P98179 157 aaKnown RBP12.76□□□□□ -0.37
RAB11FIP4-201ENST00000394744 IGLV1-50A0A075B6I6 118 aa12.76□□□□□ -0.37
RAB11FIP4-201ENST00000394744 NBDYA0A0U1RRE5 68 aa12.75□□□□□ -0.37
RAB11FIP4-201ENST00000394744 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.73□□□□□ -0.37
RAB11FIP4-201ENST00000394744 PRYO14603 147 aa12.72□□□□□ -0.37
RAB11FIP4-201ENST00000394744 MRPL55Q7Z7F7 128 aaKnown RBP12.72□□□□□ -0.37
RAB11FIP4-201ENST00000394744 A0A096LNI7 61 aa12.72□□□□□ -0.37
RAB11FIP4-201ENST00000394744 GHRHP01286 108 aa12.72□□□□□ -0.37
RAB11FIP4-201ENST00000394744 C14orf177Q52M58 125 aa12.71□□□□□ -0.37
RAB11FIP4-201ENST00000394744 Q6ZQT0 140 aa12.71□□□□□ -0.37
RAB11FIP4-201ENST00000394744 TENM2Q9NT68 2774 aa12.71□□□□□ -0.38
RAB11FIP4-201ENST00000394744 LOC110117498A0A087WWA1 95 aa12.7□□□□□ -0.38
RAB11FIP4-201ENST00000394744 KRTAP4-16G5E9R7 235 aaPredicted RBP12.7□□□□□ -0.38
RAB11FIP4-201ENST00000394744 IGKV2-24A0A0C4DH68 120 aa12.69□□□□□ -0.38
RAB11FIP4-201ENST00000394744 C16orf90A8MZG2 172 aa12.69□□□□□ -0.38
RAB11FIP4-201ENST00000394744 SPRR1AP35321 89 aa12.69□□□□□ -0.38
RAB11FIP4-201ENST00000394744 IMUPQ9GZP8 106 aa12.69□□□□□ -0.38
RAB11FIP4-201ENST00000394744 DSCR8Q96T75 97 aa12.69□□□□□ -0.38
RAB11FIP4-201ENST00000394744 B5MCH6 92 aa12.68□□□□□ -0.38
RAB11FIP4-201ENST00000394744 NDUFV3P56181 108 aaKnown RBP12.68□□□□□ -0.38
RAB11FIP4-201ENST00000394744 Q6ZRX8 168 aa12.68□□□□□ -0.38
RAB11FIP4-201ENST00000394744 ETDCA0A1B0GVM5 59 aa12.67□□□□□ -0.38
RAB11FIP4-201ENST00000394744 LRCOL1A6NCL2 159 aa12.67□□□□□ -0.38
RAB11FIP4-201ENST00000394744 ANAPC13Q9BS18 74 aa12.67□□□□□ -0.38
RAB11FIP4-201ENST00000394744 Q6ZRN7 208 aaPredicted RBP12.66□□□□□ -0.38
RAB11FIP4-201ENST00000394744 M0R2N4 97 aa12.65□□□□□ -0.38
RAB11FIP4-201ENST00000394744 Q9BRP9 147 aa12.65□□□□□ -0.38
RAB11FIP4-201ENST00000394744 Q6JHZ5 121 aa12.65□□□□□ -0.38
RAB11FIP4-201ENST00000394744 IGKV3D-7A0A0C4DH55 119 aa12.64□□□□□ -0.39
RAB11FIP4-201ENST00000394744 A0A1W2PNN7 141 aa12.64□□□□□ -0.39
RAB11FIP4-201ENST00000394744 DHRS4-AS1Q9P1J3 65 aa12.64□□□□□ -0.39
RAB11FIP4-201ENST00000394744 VPS13DQ5THJ4 4388 aa12.63□□□□□ -0.39
RAB11FIP4-201ENST00000394744 TRBV7-4A0A0J9YYF1 115 aa12.63□□□□□ -0.39
RAB11FIP4-201ENST00000394744 PDE6GP18545 87 aa12.63□□□□□ -0.39
RAB11FIP4-201ENST00000394744 DEFB105AQ8NG35 78 aa12.62□□□□□ -0.39
RAB11FIP4-201ENST00000394744 WWC2-AS2Q96NR7 200 aa12.62□□□□□ -0.39
RAB11FIP4-201ENST00000394744 REG3GQ6UW15 175 aa12.61□□□□□ -0.39
RAB11FIP4-201ENST00000394744 CHTF8P0CG12 524 aa12.6□□□□□ -0.39
RAB11FIP4-201ENST00000394744 Q8N377 158 aa12.6□□□□□ -0.39
RAB11FIP4-201ENST00000394744 C9orf163Q8N9P6 203 aa12.6□□□□□ -0.39
RAB11FIP4-201ENST00000394744 LINC01547P58512 204 aaPredicted RBP12.6□□□□□ -0.39
RAB11FIP4-201ENST00000394744 FAM236AA0A1B0GUQ0 79 aa12.59□□□□□ -0.39
RAB11FIP4-201ENST00000394744 FAM236BA0A1B0GV22 79 aa12.59□□□□□ -0.39
RAB11FIP4-201ENST00000394744 UBL5Q9BZL1 73 aa12.58□□□□□ -0.4
RAB11FIP4-201ENST00000394744 UBE2BP63146 152 aa12.56□□□□□ -0.4
RAB11FIP4-201ENST00000394744 ST20-AS1Q8NBB2 130 aa12.56□□□□□ -0.4
RAB11FIP4-201ENST00000394744 ERC2-IT1O76042 136 aa12.56□□□□□ -0.4
RAB11FIP4-201ENST00000394744 PHF5AQ7RTV0 110 aaKnown RBP12.52□□□□□ -0.4
RAB11FIP4-201ENST00000394744 C3orf22Q8N5N4 141 aa12.52□□□□□ -0.4
RAB11FIP4-201ENST00000394744 IGLV5-48A0A075B6I7 105 aa12.51□□□□□ -0.41
RAB11FIP4-201ENST00000394744 ATP5EP2Q5VTU8 51 aa12.51□□□□□ -0.41
RAB11FIP4-201ENST00000394744 PKIGQ9Y2B9 76 aa12.51□□□□□ -0.41
RAB11FIP4-201ENST00000394744 FAM19A1Q7Z5A9 133 aa12.5□□□□□ -0.41
RAB11FIP4-201ENST00000394744 A0A087WVE0 104 aa12.5□□□□□ -0.41
RAB11FIP4-201ENST00000394744 Q6ZVQ6 151 aa12.5□□□□□ -0.41
RAB11FIP4-201ENST00000394744 KRTAP11-1Q8IUC1 163 aa12.49□□□□□ -0.41
RAB11FIP4-201ENST00000394744 A0A087WTM6 91 aa12.49□□□□□ -0.41
RAB11FIP4-201ENST00000394744 PANO1I0J062 215 aa12.49□□□□□ -0.41
RAB11FIP4-201ENST00000394744 PRLHP81277 87 aa12.49□□□□□ -0.41
RAB11FIP4-201ENST00000394744 Q6ZR54 194 aa12.49□□□□□ -0.41
RAB11FIP4-201ENST00000394744 HIST1H4AP62805 103 aaKnown RBP12.47□□□□□ -0.41
RAB11FIP4-201ENST00000394744 LINC00474Q9P2X8 69 aa12.46□□□□□ -0.41
RAB11FIP4-201ENST00000394744 TNP2Q05952 138 aa12.45□□□□□ -0.42
RAB11FIP4-201ENST00000394744 C3orf84H3BNL1 204 aa12.44□□□□□ -0.42
RAB11FIP4-201ENST00000394744 CCDC179H3BU77 68 aa12.44□□□□□ -0.42
RAB11FIP4-201ENST00000394744 HAMPP81172 84 aa12.44□□□□□ -0.42
RAB11FIP4-201ENST00000394744 KMT2AQ03164 3969 aa12.43□□□□□ -0.42
RAB11FIP4-201ENST00000394744 FUSP35637 526 aaKnown RBP eCLIP12.42□□□□□ -0.42
RAB11FIP4-201ENST00000394744 HIGD2AQ9BW72 106 aa12.42□□□□□ -0.42
RAB11FIP4-201ENST00000394744 DNAH2Q9P225 4427 aa12.41□□□□□ -0.42
RAB11FIP4-201ENST00000394744 DPH3Q96FX2 82 aa12.41□□□□□ -0.42
RAB11FIP4-201ENST00000394744 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.41□□□□□ -0.42
RAB11FIP4-201ENST00000394744 SMIM29Q86T20 159 aa12.39□□□□□ -0.43
RAB11FIP4-201ENST00000394744 SPACA4Q8TDM5 124 aa12.39□□□□□ -0.43
RAB11FIP4-201ENST00000394744 C1orf137Q5JT78 98 aa12.39□□□□□ -0.43
RAB11FIP4-201ENST00000394744 EPM2AB3EWF7 344 aa12.38□□□□□ -0.43
RAB11FIP4-201ENST00000394744 ATOX1O00244 68 aa12.38□□□□□ -0.43
RAB11FIP4-201ENST00000394744 RTL8CO15255 209 aa12.38□□□□□ -0.43
RAB11FIP4-201ENST00000394744 LY6G6CO95867 125 aa12.38□□□□□ -0.43
RAB11FIP4-201ENST00000394744 ALMS1Q8TCU4 4167 aa12.38□□□□□ -0.43
RAB11FIP4-201ENST00000394744 A0A1W2PNM2 257 aa12.36□□□□□ -0.43
RAB11FIP4-201ENST00000394744 CXCL6P80162 114 aa12.36□□□□□ -0.43
RAB11FIP4-201ENST00000394744 C1orf134Q5TEV5 83 aa12.36□□□□□ -0.43
RAB11FIP4-201ENST00000394744 LINC00476Q8WZB0 136 aa12.36□□□□□ -0.43
RAB11FIP4-201ENST00000394744 SCXQ7RTU7 201 aa12.36□□□□□ -0.43
RAB11FIP4-201ENST00000394744 H0Y9J4 135 aa12.35□□□□□ -0.43
RAB11FIP4-201ENST00000394744 DNAH17Q9UFH2 4485 aa12.33□□□□□ -0.44
RAB11FIP4-201ENST00000394744 UBE2AP49459 152 aa12.33□□□□□ -0.44
RAB11FIP4-201ENST00000394744 F8WEM9 126 aa12.32□□□□□ -0.44
RAB11FIP4-201ENST00000394744 Q8NBF4 154 aa12.32□□□□□ -0.44
RAB11FIP4-201ENST00000394744 HYDINQ4G0P3 5121 aa12.32□□□□□ -0.44
RAB11FIP4-201ENST00000394744 NREPQ16612 68 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms