RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 LYSTQ99698 3801 aa8.8□□□□□ -1
GTF2F1-201ENST00000394456 FAM168BA1KXE4 195 aa8.8□□□□□ -1
GTF2F1-201ENST00000394456 M0R378 163 aa8.8□□□□□ -1
GTF2F1-201ENST00000394456 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.8□□□□□ -1
GTF2F1-201ENST00000394456 LINC00528Q8N1L1 170 aa8.8□□□□□ -1
GTF2F1-201ENST00000394456 DEFB105AQ8NG35 78 aa8.79□□□□□ -1
GTF2F1-201ENST00000394456 LINC00588Q9Y4M8 146 aa8.79□□□□□ -1
GTF2F1-201ENST00000394456 RPL37AP8A6NKH3 93 aa8.78□□□□□ -1
GTF2F1-201ENST00000394456 SYCNQ0VAF6 134 aa8.78□□□□□ -1
GTF2F1-201ENST00000394456 TRBV7-4A0A0J9YYF1 115 aa8.78□□□□□ -1
GTF2F1-201ENST00000394456 ATP5EP2Q5VTU8 51 aa8.77□□□□□ -1.01
GTF2F1-201ENST00000394456 Q8N9L7 120 aa8.77□□□□□ -1.01
GTF2F1-201ENST00000394456 DNAH1Q9P2D7 4330 aa8.76□□□□□ -1.01
GTF2F1-201ENST00000394456 DNAH10OSP0CZ25 163 aa8.76□□□□□ -1.01
GTF2F1-201ENST00000394456 C7orf33Q8WU49 177 aa8.76□□□□□ -1.01
GTF2F1-201ENST00000394456 DNAH10Q8IVF4 4471 aa8.76□□□□□ -1.01
GTF2F1-201ENST00000394456 TENM2Q9NT68 2774 aa8.76□□□□□ -1.01
GTF2F1-201ENST00000394456 C20orf197Q8N268 126 aa8.75□□□□□ -1.01
GTF2F1-201ENST00000394456 CSMD3Q7Z407 3707 aa8.75□□□□□ -1.01
GTF2F1-201ENST00000394456 OXTP01178 125 aa8.74□□□□□ -1.01
GTF2F1-201ENST00000394456 KRTAP7-1Q8IUC3 87 aa8.74□□□□□ -1.01
GTF2F1-201ENST00000394456 DNAH9Q9NYC9 4486 aa8.73□□□□□ -1.01
GTF2F1-201ENST00000394456 C3orf84H3BNL1 204 aa8.72□□□□□ -1.01
GTF2F1-201ENST00000394456 NKAPP1Q8N9T2 125 aa8.72□□□□□ -1.01
GTF2F1-201ENST00000394456 TRBV7-6A0A0J9YX20 115 aa8.72□□□□□ -1.01
GTF2F1-201ENST00000394456 Q8N377 158 aa8.71□□□□□ -1.02
GTF2F1-201ENST00000394456 ST20-AS1Q8NBB2 130 aa8.71□□□□□ -1.02
GTF2F1-201ENST00000394456 SNURFQ9Y675 71 aa8.7□□□□□ -1.02
GTF2F1-201ENST00000394456 DPH3Q96FX2 82 aa8.69□□□□□ -1.02
GTF2F1-201ENST00000394456 Q9BRP9 147 aa8.69□□□□□ -1.02
GTF2F1-201ENST00000394456 KCNQ1DNQ9H478 68 aa8.69□□□□□ -1.02
GTF2F1-201ENST00000394456 BPY2O14599 106 aa8.68□□□□□ -1.02
GTF2F1-201ENST00000394456 FAM19A5Q7Z5A7 132 aaPredicted RBP8.68□□□□□ -1.02
GTF2F1-201ENST00000394456 PDE6GP18545 87 aa8.67□□□□□ -1.02
GTF2F1-201ENST00000394456 J3KT08 172 aa8.67□□□□□ -1.02
GTF2F1-201ENST00000394456 ERC2-IT1O76042 136 aa8.67□□□□□ -1.02
GTF2F1-201ENST00000394456 A0A0G2JQZ4 141 aa8.67□□□□□ -1.02
GTF2F1-201ENST00000394456 A0A1W2PNN7 141 aa8.67□□□□□ -1.02
GTF2F1-201ENST00000394456 TMEM258P61165 79 aa8.66□□□□□ -1.02
GTF2F1-201ENST00000394456 CXCL6P80162 114 aa8.66□□□□□ -1.02
GTF2F1-201ENST00000394456 RMI2Q96E14 147 aa8.66□□□□□ -1.02
GTF2F1-201ENST00000394456 DNHD1Q96M86 4753 aa8.65□□□□□ -1.02
GTF2F1-201ENST00000394456 SRRM2Q9UQ35 2752 aaKnown RBP8.65□□□□□ -1.02
GTF2F1-201ENST00000394456 TRAV7A0A075B6U4 112 aa8.64□□□□□ -1.03
GTF2F1-201ENST00000394456 KRTAP4-16G5E9R7 235 aaPredicted RBP8.64□□□□□ -1.03
GTF2F1-201ENST00000394456 IGLV1-50A0A075B6I6 118 aa8.63□□□□□ -1.03
GTF2F1-201ENST00000394456 H3BQ85 93 aa8.63□□□□□ -1.03
GTF2F1-201ENST00000394456 Q6ZRX8 168 aa8.63□□□□□ -1.03
GTF2F1-201ENST00000394456 KRTAP1-5Q9BYS1 174 aa8.63□□□□□ -1.03
GTF2F1-201ENST00000394456 DNAH7Q8WXX0 4024 aa8.62□□□□□ -1.03
GTF2F1-201ENST00000394456 B9D2Q9BPU9 175 aa8.62□□□□□ -1.03
GTF2F1-201ENST00000394456 A0A1W2PNM2 257 aa8.61□□□□□ -1.03
GTF2F1-201ENST00000394456 H7BZZ5 65 aa8.61□□□□□ -1.03
GTF2F1-201ENST00000394456 IGKV4-1P06312 121 aa8.61□□□□□ -1.03
GTF2F1-201ENST00000394456 NREPQ16612 68 aa8.61□□□□□ -1.03
GTF2F1-201ENST00000394456 UBE2DNLQ8IWF7 75 aa8.6□□□□□ -1.03
GTF2F1-201ENST00000394456 ETDCA0A1B0GVM5 59 aa8.6□□□□□ -1.03
GTF2F1-201ENST00000394456 TLX1NBP0CAT3 122 aa8.6□□□□□ -1.03
GTF2F1-201ENST00000394456 PRKDCP78527 4128 aaKnown RBP8.59□□□□□ -1.03
GTF2F1-201ENST00000394456 F8WDY8 70 aa8.59□□□□□ -1.03
GTF2F1-201ENST00000394456 APLNQ9ULZ1 77 aa8.59□□□□□ -1.03
GTF2F1-201ENST00000394456 MEGF8Q7Z7M0 2845 aa8.59□□□□□ -1.03
GTF2F1-201ENST00000394456 IGKV2-24A0A0C4DH68 120 aa8.59□□□□□ -1.03
GTF2F1-201ENST00000394456 IGLV5-48A0A075B6I7 105 aa8.58□□□□□ -1.04
GTF2F1-201ENST00000394456 MRPL55Q7Z7F7 128 aaKnown RBP8.58□□□□□ -1.04
GTF2F1-201ENST00000394456 PLECQ15149 4684 aaKnown RBP8.57□□□□□ -1.04
GTF2F1-201ENST00000394456 SPRR1AP35321 89 aa8.57□□□□□ -1.04
GTF2F1-201ENST00000394456 RPS28P62857 69 aaKnown RBP8.57□□□□□ -1.04
GTF2F1-201ENST00000394456 UBE2BP63146 152 aa8.57□□□□□ -1.04
GTF2F1-201ENST00000394456 F8WEM9 126 aa8.56□□□□□ -1.04
GTF2F1-201ENST00000394456 C1orf137Q5JT78 98 aa8.56□□□□□ -1.04
GTF2F1-201ENST00000394456 FAM236DA0A1B0GTK5 79 aa8.55□□□□□ -1.04
GTF2F1-201ENST00000394456 FAM236CP0DP71 79 aa8.55□□□□□ -1.04
GTF2F1-201ENST00000394456 TNP2Q05952 138 aa8.55□□□□□ -1.04
GTF2F1-201ENST00000394456 PLA2G2DQ9UNK4 145 aa8.55□□□□□ -1.04
GTF2F1-201ENST00000394456 A0A096LNI7 61 aa8.55□□□□□ -1.04
GTF2F1-201ENST00000394456 PRYO14603 147 aa8.55□□□□□ -1.04
GTF2F1-201ENST00000394456 DHRS4-AS1Q9P1J3 65 aa8.55□□□□□ -1.04
GTF2F1-201ENST00000394456 DYNC2H1Q8NCM8 4307 aaKnown RBP8.55□□□□□ -1.04
GTF2F1-201ENST00000394456 IGLV5-37A0A075B6J1 123 aa8.54□□□□□ -1.04
GTF2F1-201ENST00000394456 PRLHP81277 87 aa8.54□□□□□ -1.04
GTF2F1-201ENST00000394456 C4orf26Q17RF5 130 aa8.54□□□□□ -1.04
GTF2F1-201ENST00000394456 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.54□□□□□ -1.04
GTF2F1-201ENST00000394456 KLKP1Q107X0 134 aa8.54□□□□□ -1.04
GTF2F1-201ENST00000394456 PSCAO43653 123 aa8.53□□□□□ -1.04
GTF2F1-201ENST00000394456 KRTAP11-1Q8IUC1 163 aa8.53□□□□□ -1.04
GTF2F1-201ENST00000394456 CHTF8P0CG12 524 aa8.52□□□□□ -1.04
GTF2F1-201ENST00000394456 DEFB116Q30KQ4 102 aa8.52□□□□□ -1.05
GTF2F1-201ENST00000394456 SMIM29Q86T20 159 aa8.52□□□□□ -1.05
GTF2F1-201ENST00000394456 TGP01266 2768 aa8.52□□□□□ -1.05
GTF2F1-201ENST00000394456 BCE1O60756 84 aa8.52□□□□□ -1.05
GTF2F1-201ENST00000394456 Q5XG85 94 aa8.51□□□□□ -1.05
GTF2F1-201ENST00000394456 STARD9Q9P2P6 4700 aa8.51□□□□□ -1.05
GTF2F1-201ENST00000394456 REG3GQ6UW15 175 aa8.51□□□□□ -1.05
GTF2F1-201ENST00000394456 FUSP35637 526 aaKnown RBP eCLIP8.5□□□□□ -1.05
GTF2F1-201ENST00000394456 OCR1Q9BZK8 76 aa8.5□□□□□ -1.05
GTF2F1-201ENST00000394456 FAM30AQ9NZY2 134 aa8.5□□□□□ -1.05
GTF2F1-201ENST00000394456 Q8NBF4 154 aa8.5□□□□□ -1.05
GTF2F1-201ENST00000394456 TMEM254Q8TBM7 123 aa8.49□□□□□ -1.05
GTF2F1-201ENST00000394456 LINC00476Q8WZB0 136 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 145.9 ms