RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 Q6JHZ5 121 aa5.85□□□□□ -1.47
TDP1-202ENST00000393452 Q6ZQT0 140 aa5.85□□□□□ -1.47
TDP1-202ENST00000393452 LAMTOR3Q9UHA4 124 aa5.85□□□□□ -1.47
TDP1-202ENST00000393452 KRTAP7-1Q8IUC3 87 aa5.84□□□□□ -1.47
TDP1-202ENST00000393452 DNAH9Q9NYC9 4486 aa5.84□□□□□ -1.48
TDP1-202ENST00000393452 LOC107984640A0A0U1RRK4 108 aa5.83□□□□□ -1.48
TDP1-202ENST00000393452 PDE6GP18545 87 aa5.83□□□□□ -1.48
TDP1-202ENST00000393452 IGLV1-50A0A075B6I6 118 aa5.82□□□□□ -1.48
TDP1-202ENST00000393452 FAM236AA0A1B0GUQ0 79 aa5.82□□□□□ -1.48
TDP1-202ENST00000393452 FAM236BA0A1B0GV22 79 aa5.82□□□□□ -1.48
TDP1-202ENST00000393452 FAM168BA1KXE4 195 aa5.82□□□□□ -1.48
TDP1-202ENST00000393452 KRTAP4-16G5E9R7 235 aaPredicted RBP5.82□□□□□ -1.48
TDP1-202ENST00000393452 SPRR1AP35321 89 aa5.82□□□□□ -1.48
TDP1-202ENST00000393452 DSCR8Q96T75 97 aa5.82□□□□□ -1.48
TDP1-202ENST00000393452 TRBV7-4A0A0J9YYF1 115 aa5.81□□□□□ -1.48
TDP1-202ENST00000393452 PRYO14603 147 aa5.81□□□□□ -1.48
TDP1-202ENST00000393452 CNBPP62633 177 aaKnown RBP5.81□□□□□ -1.48
TDP1-202ENST00000393452 HIST1H4AP62805 103 aaKnown RBP5.81□□□□□ -1.48
TDP1-202ENST00000393452 UBE2DNLQ8IWF7 75 aa5.81□□□□□ -1.48
TDP1-202ENST00000393452 ATP5EP2Q5VTU8 51 aa5.8□□□□□ -1.48
TDP1-202ENST00000393452 IGKV3D-7A0A0C4DH55 119 aa5.8□□□□□ -1.48
TDP1-202ENST00000393452 Q6ZRX8 168 aa5.8□□□□□ -1.48
TDP1-202ENST00000393452 RPL37AP8A6NKH3 93 aa5.79□□□□□ -1.48
TDP1-202ENST00000393452 M0R2N4 97 aa5.79□□□□□ -1.48
TDP1-202ENST00000393452 MRPL55Q7Z7F7 128 aaKnown RBP5.79□□□□□ -1.48
TDP1-202ENST00000393452 UBL5Q9BZL1 73 aa5.79□□□□□ -1.48
TDP1-202ENST00000393452 DHRS4-AS1Q9P1J3 65 aa5.79□□□□□ -1.48
TDP1-202ENST00000393452 DYNC2H1Q8NCM8 4307 aaKnown RBP5.78□□□□□ -1.48
TDP1-202ENST00000393452 NUPR2A6NF83 97 aa5.78□□□□□ -1.48
TDP1-202ENST00000393452 C16orf90A8MZG2 172 aa5.78□□□□□ -1.48
TDP1-202ENST00000393452 PSCAO43653 123 aa5.78□□□□□ -1.48
TDP1-202ENST00000393452 FAM19A5Q7Z5A7 132 aaPredicted RBP5.78□□□□□ -1.48
TDP1-202ENST00000393452 Q9BRP9 147 aa5.78□□□□□ -1.48
TDP1-202ENST00000393452 MEGF8Q7Z7M0 2845 aa5.77□□□□□ -1.49
TDP1-202ENST00000393452 LINC01547P58512 204 aaPredicted RBP5.77□□□□□ -1.49
TDP1-202ENST00000393452 A0A096LNI7 61 aa5.77□□□□□ -1.49
TDP1-202ENST00000393452 C14orf177Q52M58 125 aa5.77□□□□□ -1.49
TDP1-202ENST00000393452 Q8N377 158 aa5.77□□□□□ -1.49
TDP1-202ENST00000393452 LYSTQ99698 3801 aa5.77□□□□□ -1.49
TDP1-202ENST00000393452 ETDCA0A1B0GVM5 59 aa5.76□□□□□ -1.49
TDP1-202ENST00000393452 Q6ZVQ6 151 aa5.75□□□□□ -1.49
TDP1-202ENST00000393452 C3orf22Q8N5N4 141 aa5.75□□□□□ -1.49
TDP1-202ENST00000393452 CSMD3Q7Z407 3707 aa5.75□□□□□ -1.49
TDP1-202ENST00000393452 A0A087WVE0 104 aa5.75□□□□□ -1.49
TDP1-202ENST00000393452 NBDYA0A0U1RRE5 68 aa5.75□□□□□ -1.49
TDP1-202ENST00000393452 C9orf153Q5TBE3 101 aa5.75□□□□□ -1.49
TDP1-202ENST00000393452 IGLV5-48A0A075B6I7 105 aa5.74□□□□□ -1.49
TDP1-202ENST00000393452 LRCOL1A6NCL2 159 aa5.74□□□□□ -1.49
TDP1-202ENST00000393452 ATOX1O00244 68 aa5.74□□□□□ -1.49
TDP1-202ENST00000393452 UQCRQO14949 82 aa5.74□□□□□ -1.49
TDP1-202ENST00000393452 REG3GQ6UW15 175 aa5.74□□□□□ -1.49
TDP1-202ENST00000393452 Q6ZRN7 208 aaPredicted RBP5.74□□□□□ -1.49
TDP1-202ENST00000393452 PRKDCP78527 4128 aaKnown RBP5.73□□□□□ -1.49
TDP1-202ENST00000393452 IGKV2-24A0A0C4DH68 120 aa5.73□□□□□ -1.49
TDP1-202ENST00000393452 A0A1W2PNN7 141 aa5.73□□□□□ -1.49
TDP1-202ENST00000393452 SEC61GP60059 68 aa5.73□□□□□ -1.49
TDP1-202ENST00000393452 DEFB105AQ8NG35 78 aa5.73□□□□□ -1.49
TDP1-202ENST00000393452 TENM2Q9NT68 2774 aa5.73□□□□□ -1.49
TDP1-202ENST00000393452 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.72□□□□□ -1.49
TDP1-202ENST00000393452 TNP2Q05952 138 aa5.72□□□□□ -1.49
TDP1-202ENST00000393452 FAM19A1Q7Z5A9 133 aa5.72□□□□□ -1.49
TDP1-202ENST00000393452 C9orf163Q8N9P6 203 aa5.72□□□□□ -1.49
TDP1-202ENST00000393452 DNAH10Q8IVF4 4471 aa5.72□□□□□ -1.49
TDP1-202ENST00000393452 ERC2-IT1O76042 136 aa5.72□□□□□ -1.49
TDP1-202ENST00000393452 CXCL6P80162 114 aa5.72□□□□□ -1.49
TDP1-202ENST00000393452 DNAH7Q8WXX0 4024 aa5.71□□□□□ -1.5
TDP1-202ENST00000393452 ST20-AS1Q8NBB2 130 aa5.71□□□□□ -1.5
TDP1-202ENST00000393452 COX7CP15954 63 aa5.71□□□□□ -1.5
TDP1-202ENST00000393452 UBE2BP63146 152 aa5.7□□□□□ -1.5
TDP1-202ENST00000393452 HAMPP81172 84 aa5.7□□□□□ -1.5
TDP1-202ENST00000393452 PKIGQ9Y2B9 76 aa5.7□□□□□ -1.5
TDP1-202ENST00000393452 CHTF8P0CG12 524 aa5.69□□□□□ -1.5
TDP1-202ENST00000393452 A0A1B0GW54 56 aa5.69□□□□□ -1.5
TDP1-202ENST00000393452 CRYGAP11844 174 aa5.69□□□□□ -1.5
TDP1-202ENST00000393452 SERP2Q8N6R1 65 aa5.68□□□□□ -1.5
TDP1-202ENST00000393452 TGP01266 2768 aa5.68□□□□□ -1.5
TDP1-202ENST00000393452 SMIM29Q86T20 159 aa5.67□□□□□ -1.5
TDP1-202ENST00000393452 CYSTM1Q9H1C7 97 aa5.67□□□□□ -1.5
TDP1-202ENST00000393452 PLECQ15149 4684 aaKnown RBP5.67□□□□□ -1.5
TDP1-202ENST00000393452 C1orf137Q5JT78 98 aa5.67□□□□□ -1.5
TDP1-202ENST00000393452 KRTAP11-1Q8IUC1 163 aa5.67□□□□□ -1.5
TDP1-202ENST00000393452 LINC00474Q9P2X8 69 aa5.67□□□□□ -1.5
TDP1-202ENST00000393452 A0A1W2PNM2 257 aa5.66□□□□□ -1.5
TDP1-202ENST00000393452 J3KT08 172 aa5.66□□□□□ -1.5
TDP1-202ENST00000393452 PRLHP81277 87 aa5.66□□□□□ -1.5
TDP1-202ENST00000393452 PHF5AQ7RTV0 110 aaKnown RBP5.66□□□□□ -1.5
TDP1-202ENST00000393452 H0Y9J4 135 aa5.66□□□□□ -1.5
TDP1-202ENST00000393452 FUSP35637 526 aaKnown RBP eCLIP5.66□□□□□ -1.5
TDP1-202ENST00000393452 BCE1O60756 84 aa5.65□□□□□ -1.5
TDP1-202ENST00000393452 Q8NBF4 154 aa5.65□□□□□ -1.5
TDP1-202ENST00000393452 EPM2AB3EWF7 344 aa5.65□□□□□ -1.51
TDP1-202ENST00000393452 C3orf84H3BNL1 204 aa5.65□□□□□ -1.51
TDP1-202ENST00000393452 NREPQ16612 68 aa5.65□□□□□ -1.51
TDP1-202ENST00000393452 Q6ZR54 194 aa5.65□□□□□ -1.51
TDP1-202ENST00000393452 SPRR4Q96PI1 79 aa5.65□□□□□ -1.51
TDP1-202ENST00000393452 VPS13DQ5THJ4 4388 aa5.65□□□□□ -1.51
TDP1-202ENST00000393452 STARD9Q9P2P6 4700 aa5.65□□□□□ -1.51
TDP1-202ENST00000393452 RPS28P62857 69 aaKnown RBP5.64□□□□□ -1.51
TDP1-202ENST00000393452 A0A087WTM6 91 aa5.64□□□□□ -1.51
TDP1-202ENST00000393452 PANO1I0J062 215 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 421.9 ms