RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 SPRR1AP35321 89 aa9.21□□□□□ -0.94
MKS1-203ENST00000393120 CNBPP62633 177 aaKnown RBP9.21□□□□□ -0.94
MKS1-203ENST00000393120 KRTAP7-1Q8IUC3 87 aa9.21□□□□□ -0.94
MKS1-203ENST00000393120 UBE2DNLQ8IWF7 75 aa9.21□□□□□ -0.94
MKS1-203ENST00000393120 TRBV7-4A0A0J9YYF1 115 aa9.2□□□□□ -0.94
MKS1-203ENST00000393120 FAM168BA1KXE4 195 aa9.2□□□□□ -0.94
MKS1-203ENST00000393120 KRTAP4-16G5E9R7 235 aaPredicted RBP9.2□□□□□ -0.94
MKS1-203ENST00000393120 DHRS4-AS1Q9P1J3 65 aa9.19□□□□□ -0.94
MKS1-203ENST00000393120 UBL5Q9BZL1 73 aa9.19□□□□□ -0.94
MKS1-203ENST00000393120 IGKV3D-7A0A0C4DH55 119 aa9.18□□□□□ -0.94
MKS1-203ENST00000393120 HIST1H4AP62805 103 aaKnown RBP9.18□□□□□ -0.94
MKS1-203ENST00000393120 Q6ZRX8 168 aa9.17□□□□□ -0.94
MKS1-203ENST00000393120 MRPL55Q7Z7F7 128 aaKnown RBP9.17□□□□□ -0.94
MKS1-203ENST00000393120 NUPR2A6NF83 97 aa9.17□□□□□ -0.94
MKS1-203ENST00000393120 B5MCH6 92 aa9.17□□□□□ -0.94
MKS1-203ENST00000393120 C14orf177Q52M58 125 aa9.17□□□□□ -0.94
MKS1-203ENST00000393120 RPL37AP8A6NKH3 93 aa9.16□□□□□ -0.94
MKS1-203ENST00000393120 PSCAO43653 123 aa9.16□□□□□ -0.94
MKS1-203ENST00000393120 DNAH1Q9P2D7 4330 aa9.16□□□□□ -0.94
MKS1-203ENST00000393120 C16orf90A8MZG2 172 aa9.15□□□□□ -0.94
MKS1-203ENST00000393120 FAM19A5Q7Z5A7 132 aaPredicted RBP9.14□□□□□ -0.95
MKS1-203ENST00000393120 ETDCA0A1B0GVM5 59 aa9.13□□□□□ -0.95
MKS1-203ENST00000393120 M0R2N4 97 aa9.13□□□□□ -0.95
MKS1-203ENST00000393120 CCDC179H3BU77 68 aa9.13□□□□□ -0.95
MKS1-203ENST00000393120 STAB2Q8WWQ8 2551 aa9.12□□□□□ -0.95
MKS1-203ENST00000393120 LINC01547P58512 204 aaPredicted RBP9.12□□□□□ -0.95
MKS1-203ENST00000393120 Q8N377 158 aa9.12□□□□□ -0.95
MKS1-203ENST00000393120 Q9BRP9 147 aa9.12□□□□□ -0.95
MKS1-203ENST00000393120 ATOX1O00244 68 aa9.11□□□□□ -0.95
MKS1-203ENST00000393120 A0A096LNI7 61 aa9.11□□□□□ -0.95
MKS1-203ENST00000393120 NBDYA0A0U1RRE5 68 aa9.11□□□□□ -0.95
MKS1-203ENST00000393120 IGLV5-48A0A075B6I7 105 aa9.1□□□□□ -0.95
MKS1-203ENST00000393120 Q6ZVQ6 151 aa9.1□□□□□ -0.95
MKS1-203ENST00000393120 REG3GQ6UW15 175 aa9.09□□□□□ -0.95
MKS1-203ENST00000393120 DNAH9Q9NYC9 4486 aa9.09□□□□□ -0.95
MKS1-203ENST00000393120 LRCOL1A6NCL2 159 aa9.08□□□□□ -0.96
MKS1-203ENST00000393120 PKIGQ9Y2B9 76 aa9.08□□□□□ -0.96
MKS1-203ENST00000393120 COL7A1Q02388 2944 aa9.08□□□□□ -0.96
MKS1-203ENST00000393120 A0A087WVE0 104 aa9.07□□□□□ -0.96
MKS1-203ENST00000393120 CXCL6P80162 114 aa9.07□□□□□ -0.96
MKS1-203ENST00000393120 DEFB105AQ8NG35 78 aa9.07□□□□□ -0.96
MKS1-203ENST00000393120 A0A1W2PNN7 141 aa9.07□□□□□ -0.96
MKS1-203ENST00000393120 Q6ZRN7 208 aaPredicted RBP9.06□□□□□ -0.96
MKS1-203ENST00000393120 C9orf163Q8N9P6 203 aa9.06□□□□□ -0.96
MKS1-203ENST00000393120 UQCRQO14949 82 aa9.05□□□□□ -0.96
MKS1-203ENST00000393120 C3orf22Q8N5N4 141 aa9.05□□□□□ -0.96
MKS1-203ENST00000393120 DYNC2H1Q8NCM8 4307 aaKnown RBP9.05□□□□□ -0.96
MKS1-203ENST00000393120 IGKV2-24A0A0C4DH68 120 aa9.05□□□□□ -0.96
MKS1-203ENST00000393120 A0A1B0GW54 56 aa9.05□□□□□ -0.96
MKS1-203ENST00000393120 TNP2Q05952 138 aa9.05□□□□□ -0.96
MKS1-203ENST00000393120 FAM19A1Q7Z5A9 133 aa9.05□□□□□ -0.96
MKS1-203ENST00000393120 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.04□□□□□ -0.96
MKS1-203ENST00000393120 COX7CP15954 63 aa9.04□□□□□ -0.96
MKS1-203ENST00000393120 ERC2-IT1O76042 136 aa9.03□□□□□ -0.96
MKS1-203ENST00000393120 UBE2BP63146 152 aa9.03□□□□□ -0.96
MKS1-203ENST00000393120 HAMPP81172 84 aa9.03□□□□□ -0.96
MKS1-203ENST00000393120 ST20-AS1Q8NBB2 130 aa9.03□□□□□ -0.96
MKS1-203ENST00000393120 LINC00474Q9P2X8 69 aa9.01□□□□□ -0.97
MKS1-203ENST00000393120 SERP2Q8N6R1 65 aa9.01□□□□□ -0.97
MKS1-203ENST00000393120 BCE1O60756 84 aa9□□□□□ -0.97
MKS1-203ENST00000393120 H0Y9J4 135 aa8.98□□□□□ -0.97
MKS1-203ENST00000393120 CHTF8P0CG12 524 aa8.97□□□□□ -0.97
MKS1-203ENST00000393120 FUSP35637 526 aaKnown RBP eCLIP8.97□□□□□ -0.97
MKS1-203ENST00000393120 C1orf137Q5JT78 98 aa8.97□□□□□ -0.97
MKS1-203ENST00000393120 C9orf153Q5TBE3 101 aa8.97□□□□□ -0.97
MKS1-203ENST00000393120 SMIM29Q86T20 159 aa8.97□□□□□ -0.97
MKS1-203ENST00000393120 CRYGAP11844 174 aa8.97□□□□□ -0.97
MKS1-203ENST00000393120 NREPQ16612 68 aa8.97□□□□□ -0.97
MKS1-203ENST00000393120 A0A1W2PNM2 257 aa8.95□□□□□ -0.98
MKS1-203ENST00000393120 PHF5AQ7RTV0 110 aaKnown RBP8.95□□□□□ -0.98
MKS1-203ENST00000393120 Q8NBF4 154 aa8.95□□□□□ -0.98
MKS1-203ENST00000393120 SPRR4Q96PI1 79 aa8.95□□□□□ -0.98
MKS1-203ENST00000393120 EPM2AB3EWF7 344 aa8.94□□□□□ -0.98
MKS1-203ENST00000393120 PRLHP81277 87 aa8.94□□□□□ -0.98
MKS1-203ENST00000393120 KRTAP21-3Q3LHN1 58 aa8.94□□□□□ -0.98
MKS1-203ENST00000393120 KRTAP11-1Q8IUC1 163 aa8.93□□□□□ -0.98
MKS1-203ENST00000393120 CSMD3Q7Z407 3707 aa8.93□□□□□ -0.98
MKS1-203ENST00000393120 IGLV8-61A0A075B6I0 122 aa8.93□□□□□ -0.98
MKS1-203ENST00000393120 Q6ZR54 194 aa8.93□□□□□ -0.98
MKS1-203ENST00000393120 LYSTQ99698 3801 aa8.93□□□□□ -0.98
MKS1-203ENST00000393120 SS18L2Q9UHA2 77 aa8.93□□□□□ -0.98
MKS1-203ENST00000393120 A0A087WTM6 91 aa8.92□□□□□ -0.98
MKS1-203ENST00000393120 C3orf84H3BNL1 204 aa8.92□□□□□ -0.98
MKS1-203ENST00000393120 F8WEM9 126 aa8.92□□□□□ -0.98
MKS1-203ENST00000393120 SMIM20Q8N5G0 67 aa8.92□□□□□ -0.98
MKS1-203ENST00000393120 SPRR1BP22528 89 aa8.9□□□□□ -0.98
MKS1-203ENST00000393120 SCXQ7RTU7 201 aa8.9□□□□□ -0.98
MKS1-203ENST00000393120 HIGD2AQ9BW72 106 aa8.9□□□□□ -0.98
MKS1-203ENST00000393120 BPY2O14599 106 aa8.9□□□□□ -0.99
MKS1-203ENST00000393120 SPACA4Q8TDM5 124 aa8.9□□□□□ -0.99
MKS1-203ENST00000393120 LINC00476Q8WZB0 136 aa8.9□□□□□ -0.99
MKS1-203ENST00000393120 PANO1I0J062 215 aa8.89□□□□□ -0.99
MKS1-203ENST00000393120 DNAH10Q8IVF4 4471 aa8.88□□□□□ -0.99
MKS1-203ENST00000393120 TRAV7A0A075B6U4 112 aa8.88□□□□□ -0.99
MKS1-203ENST00000393120 DNAH7Q8WXX0 4024 aa8.87□□□□□ -0.99
MKS1-203ENST00000393120 IGKV4-1P06312 121 aa8.87□□□□□ -0.99
MKS1-203ENST00000393120 PLECQ15149 4684 aaKnown RBP8.86□□□□□ -0.99
MKS1-203ENST00000393120 TENM2Q9NT68 2774 aa8.86□□□□□ -0.99
MKS1-203ENST00000393120 UBE2AP49459 152 aa8.86□□□□□ -0.99
MKS1-203ENST00000393120 IGFL1Q6UW32 110 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms