RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 A0A1W2PNM2 257 aa10.55□□□□□ -0.72
SHANK1-204ENST00000391814 DNAH10OSP0CZ25 163 aa10.54□□□□□ -0.72
SHANK1-204ENST00000391814 CSNK1G2-AS1Q8NCQ2 148 aa10.54□□□□□ -0.72
SHANK1-204ENST00000391814 SMR3BP02814 79 aaPredicted RBP10.53□□□□□ -0.72
SHANK1-204ENST00000391814 Q75L30 129 aa10.52□□□□□ -0.73
SHANK1-204ENST00000391814 FAM104AQ969W3 186 aa10.51□□□□□ -0.73
SHANK1-204ENST00000391814 KRTAP24-1Q3LI83 254 aa10.51□□□□□ -0.73
SHANK1-204ENST00000391814 FP248Q71RG6 208 aaPredicted RBP10.5□□□□□ -0.73
SHANK1-204ENST00000391814 JMJD1CQ15652 2540 aa10.5□□□□□ -0.73
SHANK1-204ENST00000391814 ANAPC11Q9NYG5 84 aa10.5□□□□□ -0.73
SHANK1-204ENST00000391814 ZNF575Q86XF7 245 aa10.5□□□□□ -0.73
SHANK1-204ENST00000391814 PRAC1Q96KF2 57 aa10.5□□□□□ -0.73
SHANK1-204ENST00000391814 WDR87Q6ZQQ6 2873 aa10.49□□□□□ -0.73
SHANK1-204ENST00000391814 Q8N1X5 172 aa10.49□□□□□ -0.73
SHANK1-204ENST00000391814 C9orf163Q8N9P6 203 aa10.48□□□□□ -0.73
SHANK1-204ENST00000391814 IGLV5-37A0A075B6J1 123 aa10.48□□□□□ -0.73
SHANK1-204ENST00000391814 IGLV5-48A0A075B6I7 105 aa10.47□□□□□ -0.73
SHANK1-204ENST00000391814 PRR34Q9NV39 138 aa10.47□□□□□ -0.73
SHANK1-204ENST00000391814 LUZP6Q538Z0 58 aa10.46□□□□□ -0.74
SHANK1-204ENST00000391814 PLA2G2DQ9UNK4 145 aa10.46□□□□□ -0.74
SHANK1-204ENST00000391814 PRR26Q8N8Z3 221 aa10.44□□□□□ -0.74
SHANK1-204ENST00000391814 LINC00304Q8N9R0 145 aa10.42□□□□□ -0.74
SHANK1-204ENST00000391814 TLX1NBP0CAT3 122 aa10.4□□□□□ -0.74
SHANK1-204ENST00000391814 GOLGB1Q14789 3259 aaKnown RBP10.4□□□□□ -0.75
SHANK1-204ENST00000391814 M0R2T5 61 aa10.39□□□□□ -0.75
SHANK1-204ENST00000391814 MYO9AB2RTY4 2548 aa10.39□□□□□ -0.75
SHANK1-204ENST00000391814 GIG44P09565 113 aaPredicted RBP10.38□□□□□ -0.75
SHANK1-204ENST00000391814 IGLV7-46A0A075B6I9 117 aa10.38□□□□□ -0.75
SHANK1-204ENST00000391814 ZFYVE26Q68DK2 2539 aa10.38□□□□□ -0.75
SHANK1-204ENST00000391814 OXTP01178 125 aa10.38□□□□□ -0.75
SHANK1-204ENST00000391814 LRRK2Q5S007 2527 aa10.37□□□□□ -0.75
SHANK1-204ENST00000391814 TLN1Q9Y490 2541 aaKnown RBP10.37□□□□□ -0.75
SHANK1-204ENST00000391814 Q5VV11 94 aa10.37□□□□□ -0.75
SHANK1-204ENST00000391814 ZNF861PO60384 105 aa10.36□□□□□ -0.75
SHANK1-204ENST00000391814 WWC2-AS2Q96NR7 200 aa10.36□□□□□ -0.75
SHANK1-204ENST00000391814 ABCA12Q86UK0 2595 aa10.36□□□□□ -0.75
SHANK1-204ENST00000391814 ZNF462Q96JM2 2506 aa10.35□□□□□ -0.75
SHANK1-204ENST00000391814 Q8N9P0 234 aaPredicted RBP10.34□□□□□ -0.75
SHANK1-204ENST00000391814 CSAG1Q6PB30 78 aa10.33□□□□□ -0.76
SHANK1-204ENST00000391814 CASC10Q5T4H9 136 aa10.33□□□□□ -0.76
SHANK1-204ENST00000391814 LINC01558Q9Y6Z2 57 aa10.32□□□□□ -0.76
SHANK1-204ENST00000391814 CNBPP62633 177 aaKnown RBP10.32□□□□□ -0.76
SHANK1-204ENST00000391814 FN1P02751 2386 aaKnown RBP10.3□□□□□ -0.76
SHANK1-204ENST00000391814 SPRR4Q96PI1 79 aa10.3□□□□□ -0.76
SHANK1-204ENST00000391814 A0A096LNT2 108 aa10.3□□□□□ -0.76
SHANK1-204ENST00000391814 TLN2Q9Y4G6 2542 aa10.3□□□□□ -0.76
SHANK1-204ENST00000391814 LINC00612Q8N6U2 182 aa10.29□□□□□ -0.76
SHANK1-204ENST00000391814 KRTAP10-11P60412 298 aa10.29□□□□□ -0.76
SHANK1-204ENST00000391814 CENPFP49454 3210 aa10.27□□□□□ -0.76
SHANK1-204ENST00000391814 SPINK7P58062 85 aa10.27□□□□□ -0.77
SHANK1-204ENST00000391814 F8P00451 2351 aa10.25□□□□□ -0.77
SHANK1-204ENST00000391814 HRES1P13985 223 aa10.25□□□□□ -0.77
SHANK1-204ENST00000391814 C19orf73Q9NVV2 129 aa10.25□□□□□ -0.77
SHANK1-204ENST00000391814 A0A1B0GU33 70 aa10.23□□□□□ -0.77
SHANK1-204ENST00000391814 CAMK2N1Q7Z7J9 78 aa10.23□□□□□ -0.77
SHANK1-204ENST00000391814 PSORS1C2Q9UIG4 136 aa10.23□□□□□ -0.77
SHANK1-204ENST00000391814 IGLV7-43P04211 117 aa10.23□□□□□ -0.77
SHANK1-204ENST00000391814 KRTAP10-3P60369 221 aa10.21□□□□□ -0.78
SHANK1-204ENST00000391814 ANKRD11Q6UB99 2663 aaPredicted RBP10.2□□□□□ -0.78
SHANK1-204ENST00000391814 SETD2Q9BYW2 2564 aaPredicted RBP10.2□□□□□ -0.78
SHANK1-204ENST00000391814 USP9XQ93008 2570 aaPredicted RBP10.19□□□□□ -0.78
SHANK1-204ENST00000391814 LINC00483Q53H64 154 aa10.19□□□□□ -0.78
SHANK1-204ENST00000391814 CEP295Q9C0D2 2601 aa10.18□□□□□ -0.78
SHANK1-204ENST00000391814 A0A087WTM6 91 aa10.16□□□□□ -0.78
SHANK1-204ENST00000391814 MMP24-AS1A0A0U1RRL7 71 aa10.14□□□□□ -0.79
SHANK1-204ENST00000391814 CHD8Q9HCK8 2581 aa10.14□□□□□ -0.79
SHANK1-204ENST00000391814 K7EIL1 84 aa10.13□□□□□ -0.79
SHANK1-204ENST00000391814 Q8NDZ9 215 aa10.13□□□□□ -0.79
SHANK1-204ENST00000391814 SPTBN4Q9H254 2564 aa10.11□□□□□ -0.79
SHANK1-204ENST00000391814 Q6ZSA8 131 aa10.06□□□□□ -0.8
SHANK1-204ENST00000391814 DMAC1Q96GE9 116 aa10.04□□□□□ -0.8
SHANK1-204ENST00000391814 USP9YO00507 2555 aaPredicted RBP10.04□□□□□ -0.8
SHANK1-204ENST00000391814 UTRNP46939 3433 aa10.04□□□□□ -0.8
SHANK1-204ENST00000391814 A0A0A0MQY5 61 aa10.03□□□□□ -0.8
SHANK1-204ENST00000391814 CR1P17927 2039 aa10.02□□□□□ -0.81
SHANK1-204ENST00000391814 POLQO75417 2590 aa10.02□□□□□ -0.81
SHANK1-204ENST00000391814 PKD1L2Q7Z442 2459 aa10.01□□□□□ -0.81
SHANK1-204ENST00000391814 MTORP42345 2549 aa9.99□□□□□ -0.81
SHANK1-204ENST00000391814 FASNP49327 2511 aaKnown RBP9.99□□□□□ -0.81
SHANK1-204ENST00000391814 Q5W150 140 aa9.99□□□□□ -0.81
SHANK1-204ENST00000391814 ANKRD17O75179 2603 aaKnown RBP9.97□□□□□ -0.81
SHANK1-204ENST00000391814 ACANP16112 2415 aa9.96□□□□□ -0.82
SHANK1-204ENST00000391814 ROMO1P60602 79 aa9.92□□□□□ -0.82
SHANK1-204ENST00000391814 LINC00472Q9H8W2 130 aa9.91□□□□□ -0.82
SHANK1-204ENST00000391814 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.91□□□□□ -0.82
SHANK1-204ENST00000391814 ZCCHC13Q8WW36 166 aaKnown RBP9.91□□□□□ -0.82
SHANK1-204ENST00000391814 S4R3F8 94 aa9.91□□□□□ -0.82
SHANK1-204ENST00000391814 SPRR1AP35321 89 aa9.86□□□□□ -0.83
SHANK1-204ENST00000391814 KRTAP26-1Q6PEX3 210 aa9.85□□□□□ -0.83
SHANK1-204ENST00000391814 BPTFQ12830 3046 aa9.84□□□□□ -0.83
SHANK1-204ENST00000391814 PCNTO95613 3336 aa9.82□□□□□ -0.84
SHANK1-204ENST00000391814 H1FX-AS1Q4G0G2 97 aa9.81□□□□□ -0.84
SHANK1-204ENST00000391814 A6NN06 94 aa9.81□□□□□ -0.84
SHANK1-204ENST00000391814 TNP2Q05952 138 aa9.81□□□□□ -0.84
SHANK1-204ENST00000391814 ASB16-AS1Q495Z4 193 aa9.78□□□□□ -0.84
SHANK1-204ENST00000391814 R4GN34 69 aa9.77□□□□□ -0.84
SHANK1-204ENST00000391814 Q5VSD8 79 aa9.77□□□□□ -0.85
SHANK1-204ENST00000391814 SPATA8Q6RVD6 105 aa9.76□□□□□ -0.85
SHANK1-204ENST00000391814 RPL37P61927 97 aaKnown RBP9.75□□□□□ -0.85
SHANK1-204ENST00000391814 DNAH12Q6ZR08 3092 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms