RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 F6UZH7 168 aa-4.1□□□□□ -3.07
RNU6-239P-201ENST00000390990 GNG11P61952 73 aa-4.1□□□□□ -3.07
RNU6-239P-201ENST00000390990 SMIM21Q3B7S5 101 aa-4.1□□□□□ -3.07
RNU6-239P-201ENST00000390990 MON2Q7Z3U7 1717 aa-4.1□□□□□ -3.07
RNU6-239P-201ENST00000390990 CATR1Q13166 79 aa-4.11□□□□□ -3.07
RNU6-239P-201ENST00000390990 RGPD8O14715 1765 aaPredicted RBP-4.12□□□□□ -3.07
RNU6-239P-201ENST00000390990 RGPD5Q99666 1765 aa-4.12□□□□□ -3.07
RNU6-239P-201ENST00000390990 PSMG4Q5JS54 123 aa-4.12□□□□□ -3.07
RNU6-239P-201ENST00000390990 SAMD9Q5K651 1589 aa-4.12□□□□□ -3.07
RNU6-239P-201ENST00000390990 CDC42BPGQ6DT37 1551 aa-4.12□□□□□ -3.07
RNU6-239P-201ENST00000390990 QSER1Q2KHR3 1735 aa-4.12□□□□□ -3.07
RNU6-239P-201ENST00000390990 TIAM2Q8IVF5 1701 aa-4.12□□□□□ -3.07
RNU6-239P-201ENST00000390990 TOPAZ1Q8N9V7 1692 aa-4.13□□□□□ -3.07
RNU6-239P-201ENST00000390990 TNRC6CQ9HCJ0 1690 aaKnown RBP-4.13□□□□□ -3.07
RNU6-239P-201ENST00000390990 UBE2L3P68036 154 aaKnown RBP-4.14□□□□□ -3.07
RNU6-239P-201ENST00000390990 C5P01031 1676 aa-4.15□□□□□ -3.07
RNU6-239P-201ENST00000390990 K7EP13 123 aa-4.15□□□□□ -3.07
RNU6-239P-201ENST00000390990 DEFB106AQ8N104 65 aa-4.15□□□□□ -3.07
RNU6-239P-201ENST00000390990 CUL7Q14999 1698 aa-4.16□□□□□ -3.07
RNU6-239P-201ENST00000390990 MAGI2Q86UL8 1455 aa-4.16□□□□□ -3.08
RNU6-239P-201ENST00000390990 DR1Q01658 176 aa-4.16□□□□□ -3.08
RNU6-239P-201ENST00000390990 VAMP8Q9BV40 100 aa-4.17□□□□□ -3.08
RNU6-239P-201ENST00000390990 USP32Q8NFA0 1604 aa-4.17□□□□□ -3.08
RNU6-239P-201ENST00000390990 UBE2L5PA0A1B0GUS4 154 aa-4.18□□□□□ -3.08
RNU6-239P-201ENST00000390990 LINC00158P58513 81 aa-4.18□□□□□ -3.08
RNU6-239P-201ENST00000390990 PRO3102Q9H379 93 aa-4.18□□□□□ -3.08
RNU6-239P-201ENST00000390990 AP4S1Q9Y587 144 aa-4.18□□□□□ -3.08
RNU6-239P-201ENST00000390990 UBR3Q6ZT12 1888 aa-4.18□□□□□ -3.08
RNU6-239P-201ENST00000390990 GNG14A0A1W2PPG7 69 aa-4.19□□□□□ -3.08
RNU6-239P-201ENST00000390990 APOC2P02655 101 aa-4.19□□□□□ -3.08
RNU6-239P-201ENST00000390990 C3orf79P0CE67 100 aa-4.19□□□□□ -3.08
RNU6-239P-201ENST00000390990 CSMD2Q7Z408 3487 aa-4.19□□□□□ -3.08
RNU6-239P-201ENST00000390990 ASIPP42127 132 aa-4.2□□□□□ -3.08
RNU6-239P-201ENST00000390990 RGPD3A6NKT7 1758 aaPredicted RBP-4.2□□□□□ -3.08
RNU6-239P-201ENST00000390990 RGPD4Q7Z3J3 1758 aa-4.2□□□□□ -3.08
RNU6-239P-201ENST00000390990 SCAPERQ9BY12 1400 aa-4.21□□□□□ -3.08
RNU6-239P-201ENST00000390990 BOD1L1Q8NFC6 3051 aa-4.21□□□□□ -3.08
RNU6-239P-201ENST00000390990 OOSP1A8MZH6 123 aa-4.21□□□□□ -3.08
RNU6-239P-201ENST00000390990 MEIG1Q5JSS6 88 aa-4.21□□□□□ -3.08
RNU6-239P-201ENST00000390990 ABCC10Q5T3U5 1492 aa-4.22□□□□□ -3.08
RNU6-239P-201ENST00000390990 TNP1P09430 55 aa-4.22□□□□□ -3.08
RNU6-239P-201ENST00000390990 COX7BP24311 80 aa-4.22□□□□□ -3.08
RNU6-239P-201ENST00000390990 PFDN5Q99471 154 aa-4.22□□□□□ -3.08
RNU6-239P-201ENST00000390990 ARPC4P59998 168 aa-4.23□□□□□ -3.09
RNU6-239P-201ENST00000390990 DPH3P1Q9H4G8 78 aa-4.23□□□□□ -3.09
RNU6-239P-201ENST00000390990 WIZO95785 1651 aa-4.24□□□□□ -3.09
RNU6-239P-201ENST00000390990 NAP1L6A6NFF2 107 aa-4.24□□□□□ -3.09
RNU6-239P-201ENST00000390990 LRRC9Q6ZRR7 1453 aa-4.24□□□□□ -3.09
RNU6-239P-201ENST00000390990 TMEM262E9PQX1 116 aa-4.25□□□□□ -3.09
RNU6-239P-201ENST00000390990 IGLC2P0DOY2 106 aa-4.25□□□□□ -3.09
RNU6-239P-201ENST00000390990 IGLC3P0DOY3 106 aa-4.25□□□□□ -3.09
RNU6-239P-201ENST00000390990 FAM135AQ9P2D6 1515 aa-4.26□□□□□ -3.09
RNU6-239P-201ENST00000390990 CRYM-AS1A6NIL9 109 aa-4.27□□□□□ -3.09
RNU6-239P-201ENST00000390990 ATP5EP56381 51 aaPredicted RBP-4.27□□□□□ -3.09
RNU6-239P-201ENST00000390990 MMP24-AS1A0A0U1RRL7 71 aa-4.28□□□□□ -3.09
RNU6-239P-201ENST00000390990 DEFB130BP0DP73 79 aa-4.28□□□□□ -3.09
RNU6-239P-201ENST00000390990 DEFB130AP0DP74 79 aa-4.28□□□□□ -3.09
RNU6-239P-201ENST00000390990 ANP32BQ92688 251 aaKnown RBP-4.28□□□□□ -3.09
RNU6-239P-201ENST00000390990 CGREF1Q99674 301 aa-4.28□□□□□ -3.09
RNU6-239P-201ENST00000390990 CEP170BQ9Y4F5 1589 aaPredicted RBP-4.28□□□□□ -3.09
RNU6-239P-201ENST00000390990 RPL38P63173 70 aaKnown RBP-4.29□□□□□ -3.1
RNU6-239P-201ENST00000390990 FOCADQ5VW36 1801 aa-4.3□□□□□ -3.1
RNU6-239P-201ENST00000390990 DEPDC5O75140 1603 aa-4.3□□□□□ -3.1
RNU6-239P-201ENST00000390990 ZNF831Q5JPB2 1677 aa-4.3□□□□□ -3.1
RNU6-239P-201ENST00000390990 MAGI3Q5TCQ9 1506 aa-4.31□□□□□ -3.1
RNU6-239P-201ENST00000390990 C1orf54Q8WWF1 131 aa-4.31□□□□□ -3.1
RNU6-239P-201ENST00000390990 LZICQ8WZA0 190 aa-4.31□□□□□ -3.1
RNU6-239P-201ENST00000390990 PKD1L3Q7Z443 1732 aa-4.32□□□□□ -3.1
RNU6-239P-201ENST00000390990 ANKRD36CQ5JPF3 1778 aa-4.32□□□□□ -3.1
RNU6-239P-201ENST00000390990 SERP2Q8N6R1 65 aa-4.32□□□□□ -3.1
RNU6-239P-201ENST00000390990 WFDC9Q8NEX5 89 aa-4.32□□□□□ -3.1
RNU6-239P-201ENST00000390990 FREM2Q5SZK8 3169 aa-4.32□□□□□ -3.1
RNU6-239P-201ENST00000390990 KTN1Q86UP2 1357 aaKnown RBP-4.34□□□□□ -3.1
RNU6-239P-201ENST00000390990 FAM25AB3EWG3 89 aa-4.34□□□□□ -3.1
RNU6-239P-201ENST00000390990 FAM25CB3EWG5 89 aa-4.34□□□□□ -3.1
RNU6-239P-201ENST00000390990 FAM25GB3EWG6 89 aa-4.34□□□□□ -3.1
RNU6-239P-201ENST00000390990 TRBV25-1A0A075B6N4 114 aa-4.35□□□□□ -3.11
RNU6-239P-201ENST00000390990 FAM24AA6NFZ4 105 aa-4.35□□□□□ -3.11
RNU6-239P-201ENST00000390990 IAPPP10997 89 aa-4.35□□□□□ -3.11
RNU6-239P-201ENST00000390990 ZNF436-AS1Q8NC38 126 aaPredicted RBP-4.35□□□□□ -3.11
RNU6-239P-201ENST00000390990 CACFD1Q9UGQ2 172 aa-4.36□□□□□ -3.11
RNU6-239P-201ENST00000390990 CHD1O14646 1710 aa-4.36□□□□□ -3.11
RNU6-239P-201ENST00000390990 CRYBG1Q9Y4K1 1723 aa-4.37□□□□□ -3.11
RNU6-239P-201ENST00000390990 LYNX1G3V0Z9 82 aa-4.37□□□□□ -3.11
RNU6-239P-201ENST00000390990 PMCHL1Q16048 86 aa-4.37□□□□□ -3.11
RNU6-239P-201ENST00000390990 ATP7BP35670 1465 aa-4.37□□□□□ -3.11
RNU6-239P-201ENST00000390990 NESP48681 1621 aa-4.38□□□□□ -3.11
RNU6-239P-201ENST00000390990 LRRC7Q96NW7 1537 aa-4.39□□□□□ -3.11
RNU6-239P-201ENST00000390990 F8WEM9 126 aa-4.39□□□□□ -3.11
RNU6-239P-201ENST00000390990 PRUNE2Q8WUY3 3088 aa-4.4□□□□□ -3.11
RNU6-239P-201ENST00000390990 FYCO1Q9BQS8 1478 aa-4.4□□□□□ -3.11
RNU6-239P-201ENST00000390990 TMEM218A2RU14 115 aa-4.4□□□□□ -3.11
RNU6-239P-201ENST00000390990 GNG7O60262 68 aa-4.4□□□□□ -3.11
RNU6-239P-201ENST00000390990 LINC00470Q9BZP3 86 aa-4.4□□□□□ -3.11
RNU6-239P-201ENST00000390990 IFI6P09912 130 aa-4.41□□□□□ -3.12
RNU6-239P-201ENST00000390990 NAIPQ13075 1403 aa-4.41□□□□□ -3.12
RNU6-239P-201ENST00000390990 TOGARAM1Q9Y4F4 1720 aa-4.41□□□□□ -3.12
RNU6-239P-201ENST00000390990 ARHGAP5Q13017 1502 aa-4.42□□□□□ -3.12
RNU6-239P-201ENST00000390990 KRTDAPP60985 99 aa-4.43□□□□□ -3.12
RNU6-239P-201ENST00000390990 SELENOWP63302 87 aa-4.43□□□□□ -3.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms