RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 RPL36AP83881 106 aaKnown RBP1.82□□□□□ -2.12
TRAV41-201ENST00000390468 C9orf116Q5BN46 136 aaPredicted RBP1.82□□□□□ -2.12
TRAV41-201ENST00000390468 Q5VV11 94 aa1.82□□□□□ -2.12
TRAV41-201ENST00000390468 SCXQ7RTU7 201 aa1.82□□□□□ -2.12
TRAV41-201ENST00000390468 PRR15LQ9BU68 103 aa1.82□□□□□ -2.12
TRAV41-201ENST00000390468 C22orf24Q9Y442 160 aa1.82□□□□□ -2.12
TRAV41-201ENST00000390468 ANK2Q01484 3957 aa1.82□□□□□ -2.12
TRAV41-201ENST00000390468 SETD2Q9BYW2 2564 aaPredicted RBP1.82□□□□□ -2.12
TRAV41-201ENST00000390468 TRRAPQ9Y4A5 3859 aa1.82□□□□□ -2.12
TRAV41-201ENST00000390468 IGLV5-45A0A087WSX0 123 aa1.81□□□□□ -2.12
TRAV41-201ENST00000390468 A0A087X002 238 aa1.81□□□□□ -2.12
TRAV41-201ENST00000390468 IGKV2-29A2NJV5 120 aaPredicted RBP1.81□□□□□ -2.12
TRAV41-201ENST00000390468 PRAC2D3DTV9 90 aa1.81□□□□□ -2.12
TRAV41-201ENST00000390468 K7EQG2 157 aa1.81□□□□□ -2.12
TRAV41-201ENST00000390468 GNRH2O43555 120 aa1.81□□□□□ -2.12
TRAV41-201ENST00000390468 SEC61BP60468 96 aaKnown RBP1.81□□□□□ -2.12
TRAV41-201ENST00000390468 C6orf99Q4VX62 202 aa1.81□□□□□ -2.12
TRAV41-201ENST00000390468 C10orf25Q5T742 122 aa1.81□□□□□ -2.12
TRAV41-201ENST00000390468 Q6ZQT0 140 aa1.81□□□□□ -2.12
TRAV41-201ENST00000390468 SMIM11BQ8TCY0 68 aa1.81□□□□□ -2.12
TRAV41-201ENST00000390468 LINC00167Q96N53 147 aa1.81□□□□□ -2.12
TRAV41-201ENST00000390468 ZNF706Q9Y5V0 76 aaPredicted RBP1.81□□□□□ -2.12
TRAV41-201ENST00000390468 HIVEP1P15822 2718 aa1.81□□□□□ -2.12
TRAV41-201ENST00000390468 TEP1Q99973 2627 aaKnown RBP1.8□□□□□ -2.12
TRAV41-201ENST00000390468 IGHV3OR16-9A0A0B4J2B5 98 aa1.8□□□□□ -2.12
TRAV41-201ENST00000390468 IGHV4-28A0A0C4DH34 117 aa1.8□□□□□ -2.12
TRAV41-201ENST00000390468 IGLV5-39A0A0G2JS06 123 aa1.8□□□□□ -2.12
TRAV41-201ENST00000390468 LRCOL1A6NCL2 159 aa1.8□□□□□ -2.12
TRAV41-201ENST00000390468 IGKV3-20P01619 116 aa1.8□□□□□ -2.12
TRAV41-201ENST00000390468 CMC4P56277 68 aaPredicted RBP1.8□□□□□ -2.12
TRAV41-201ENST00000390468 LINC00158P58513 81 aa1.8□□□□□ -2.12
TRAV41-201ENST00000390468 DEFB131AP59861 70 aa1.8□□□□□ -2.12
TRAV41-201ENST00000390468 DEFB1P60022 68 aa1.8□□□□□ -2.12
TRAV41-201ENST00000390468 NANOS2P60321 138 aaKnown RBP1.8□□□□□ -2.12
TRAV41-201ENST00000390468 KRTAP10-3P60369 221 aa1.8□□□□□ -2.12
TRAV41-201ENST00000390468 DEFB114Q30KQ6 69 aa1.8□□□□□ -2.12
TRAV41-201ENST00000390468 RNASE13Q5GAN3 156 aaKnown RBP1.8□□□□□ -2.12
TRAV41-201ENST00000390468 LCE1EQ5T753 118 aa1.8□□□□□ -2.12
TRAV41-201ENST00000390468 C9orf66Q5T8R8 295 aa1.8□□□□□ -2.12
TRAV41-201ENST00000390468 NTM-AS1Q6ZSK4 140 aa1.8□□□□□ -2.12
TRAV41-201ENST00000390468 Q8N814 137 aa1.8□□□□□ -2.12
TRAV41-201ENST00000390468 C11orf72Q8NBR9 251 aa1.8□□□□□ -2.12
TRAV41-201ENST00000390468 LINC00208Q96KT6 92 aa1.8□□□□□ -2.12
TRAV41-201ENST00000390468 B9D2Q9BPU9 175 aa1.8□□□□□ -2.12
TRAV41-201ENST00000390468 RETNLBQ9BQ08 111 aa1.8□□□□□ -2.12
TRAV41-201ENST00000390468 Q9BRP9 147 aa1.8□□□□□ -2.12
TRAV41-201ENST00000390468 HIGD2AQ9BW72 106 aa1.8□□□□□ -2.12
TRAV41-201ENST00000390468 CELA1Q9UNI1 258 aa1.8□□□□□ -2.12
TRAV41-201ENST00000390468 JMJD1CQ15652 2540 aa1.79□□□□□ -2.12
TRAV41-201ENST00000390468 FLNBO75369 2602 aaKnown RBP1.79□□□□□ -2.12
TRAV41-201ENST00000390468 NF1P21359 2839 aa1.79□□□□□ -2.12
TRAV41-201ENST00000390468 LOC101927531A0A1B0GV80 90 aa1.79□□□□□ -2.12
TRAV41-201ENST00000390468 A0A1B0GW54 56 aa1.79□□□□□ -2.12
TRAV41-201ENST00000390468 C3orf84H3BNL1 204 aa1.79□□□□□ -2.12
TRAV41-201ENST00000390468 M0QY20 66 aa1.79□□□□□ -2.12
TRAV41-201ENST00000390468 INSP01308 110 aa1.79□□□□□ -2.12
TRAV41-201ENST00000390468 IGLV1-51P01701 117 aa1.79□□□□□ -2.12
TRAV41-201ENST00000390468 SPINK13Q1W4C9 94 aa1.79□□□□□ -2.12
TRAV41-201ENST00000390468 KRTAP24-1Q3LI83 254 aa1.79□□□□□ -2.12
TRAV41-201ENST00000390468 C9orf129Q5T035 196 aaKnown RBP1.79□□□□□ -2.12
TRAV41-201ENST00000390468 PRR9Q5T870 116 aa1.79□□□□□ -2.12
TRAV41-201ENST00000390468 SPANXA2-OT1Q8N9U9 137 aa1.79□□□□□ -2.12
TRAV41-201ENST00000390468 OCR1Q9BZK8 76 aa1.79□□□□□ -2.12
TRAV41-201ENST00000390468 WFDC10AQ9H1F0 79 aa1.79□□□□□ -2.12
TRAV41-201ENST00000390468 CDC42SE2Q9NRR3 84 aa1.79□□□□□ -2.12
TRAV41-201ENST00000390468 CDKN2A-AS1Q9UH64 79 aa1.79□□□□□ -2.12
TRAV41-201ENST00000390468 ATRQ13535 2644 aa1.78□□□□□ -2.12
TRAV41-201ENST00000390468 IGHV3-38A0A0C4DH36 116 aa1.78□□□□□ -2.12
TRAV41-201ENST00000390468 LCE6AA0A183 80 aa1.78□□□□□ -2.12
TRAV41-201ENST00000390468 ETDCA0A1B0GVM5 59 aa1.78□□□□□ -2.12
TRAV41-201ENST00000390468 TRBV6-4A0A1B0GX49 114 aa1.78□□□□□ -2.12
TRAV41-201ENST00000390468 KLLNB2CW77 178 aa1.78□□□□□ -2.12
TRAV41-201ENST00000390468 SMIM1B2RUZ4 78 aa1.78□□□□□ -2.12
TRAV41-201ENST00000390468 H3BPC8 53 aa1.78□□□□□ -2.12
TRAV41-201ENST00000390468 RNASE3P12724 160 aaKnown RBP1.78□□□□□ -2.12
TRAV41-201ENST00000390468 MOBPQ13875 183 aa1.78□□□□□ -2.12
TRAV41-201ENST00000390468 ODF3L2Q3SX64 289 aa1.78□□□□□ -2.12
TRAV41-201ENST00000390468 LINC00337Q8N6G1 96 aa1.78□□□□□ -2.12
TRAV41-201ENST00000390468 ZFAND2AQ8N6M9 145 aa1.78□□□□□ -2.12
TRAV41-201ENST00000390468 COX7B2Q8TF08 81 aa1.78□□□□□ -2.12
TRAV41-201ENST00000390468 OTOGQ6ZRI0 2925 aa1.78□□□□□ -2.12
TRAV41-201ENST00000390468 TRGV2A0A075B6R0 118 aa1.77□□□□□ -2.13
TRAV41-201ENST00000390468 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.77□□□□□ -2.13
TRAV41-201ENST00000390468 IGHV3OR16-12A0A075B7B8 117 aa1.77□□□□□ -2.13
TRAV41-201ENST00000390468 IGHV6-1A0A0B4J1U7 121 aa1.77□□□□□ -2.13
TRAV41-201ENST00000390468 A8MTW9 85 aa1.77□□□□□ -2.13
TRAV41-201ENST00000390468 IGKV4-1P06312 121 aa1.77□□□□□ -2.13
TRAV41-201ENST00000390468 IGHV4-30-4P0DP06 118 aa1.77□□□□□ -2.13
TRAV41-201ENST00000390468 HTN1P15515 57 aa1.77□□□□□ -2.13
TRAV41-201ENST00000390468 COX7BP24311 80 aa1.77□□□□□ -2.13
TRAV41-201ENST00000390468 LINC00315P59091 139 aa1.77□□□□□ -2.13
TRAV41-201ENST00000390468 SPAG11BQ08648 103 aa1.77□□□□□ -2.13
TRAV41-201ENST00000390468 HIGD2BQ4VC39 106 aa1.77□□□□□ -2.13
TRAV41-201ENST00000390468 Q6ZTI0 123 aa1.77□□□□□ -2.13
TRAV41-201ENST00000390468 MUC7Q8TAX7 377 aa1.77□□□□□ -2.13
TRAV41-201ENST00000390468 LINC00467Q9BRT7 94 aa1.77□□□□□ -2.13
TRAV41-201ENST00000390468 IGKV2-28A0A075B6P5 120 aa1.76□□□□□ -2.13
TRAV41-201ENST00000390468 IGHV3-73A0A0B4J1V6 119 aa1.76□□□□□ -2.13
TRAV41-201ENST00000390468 IGHV3-16A0A0C4DH30 117 aa1.76□□□□□ -2.13
TRAV41-201ENST00000390468 K7EQD1 137 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 206.2 ms