RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 KIAA0087Q14695 138 aa8.73□□□□□ -1.01
PTPRN2-202ENST00000389416 FAM168BA1KXE4 195 aa8.72□□□□□ -1.01
PTPRN2-202ENST00000389416 DEFB116Q30KQ4 102 aa8.72□□□□□ -1.01
PTPRN2-202ENST00000389416 Q6JHZ5 121 aa8.72□□□□□ -1.01
PTPRN2-202ENST00000389416 FAM19A3Q7Z5A8 133 aa8.72□□□□□ -1.01
PTPRN2-202ENST00000389416 WIPF1O43516 503 aa8.71□□□□□ -1.01
PTPRN2-202ENST00000389416 CRYBG3Q68DQ2 2970 aa8.71□□□□□ -1.02
PTPRN2-202ENST00000389416 FAM240AA0A1B0GVK7 77 aa8.71□□□□□ -1.02
PTPRN2-202ENST00000389416 CHKB-CPT1BH3BT56 60 aa8.71□□□□□ -1.02
PTPRN2-202ENST00000389416 C15orf56Q8N910 161 aa8.71□□□□□ -1.02
PTPRN2-202ENST00000389416 VPREB1P12018 145 aa8.7□□□□□ -1.02
PTPRN2-202ENST00000389416 CELSR2Q9HCU4 2923 aa8.69□□□□□ -1.02
PTPRN2-202ENST00000389416 A0A087WVE0 104 aa8.69□□□□□ -1.02
PTPRN2-202ENST00000389416 ASH1LQ9NR48 2969 aaKnown RBP8.69□□□□□ -1.02
PTPRN2-202ENST00000389416 APLNQ9ULZ1 77 aa8.68□□□□□ -1.02
PTPRN2-202ENST00000389416 CASC10Q5T4H9 136 aa8.68□□□□□ -1.02
PTPRN2-202ENST00000389416 SERTAD4-AS1Q5TG53 156 aa8.68□□□□□ -1.02
PTPRN2-202ENST00000389416 MPLKIPQ8TAP9 179 aa8.68□□□□□ -1.02
PTPRN2-202ENST00000389416 LINC00846Q9NV44 126 aa8.68□□□□□ -1.02
PTPRN2-202ENST00000389416 ELOF1P60002 83 aaKnown RBP8.68□□□□□ -1.02
PTPRN2-202ENST00000389416 Q6ZRX8 168 aa8.67□□□□□ -1.02
PTPRN2-202ENST00000389416 EPM2AB3EWF7 344 aa8.66□□□□□ -1.02
PTPRN2-202ENST00000389416 SMCPP49901 116 aaPredicted RBP8.66□□□□□ -1.02
PTPRN2-202ENST00000389416 ST20-AS1Q8NBB2 130 aa8.66□□□□□ -1.02
PTPRN2-202ENST00000389416 IGHV6-1A0A0B4J1U7 121 aa8.65□□□□□ -1.02
PTPRN2-202ENST00000389416 KMT2BQ9UMN6 2715 aaPredicted RBP8.65□□□□□ -1.02
PTPRN2-202ENST00000389416 MOBPQ13875 183 aa8.65□□□□□ -1.03
PTPRN2-202ENST00000389416 C1orf195Q5TG92 126 aa8.65□□□□□ -1.03
PTPRN2-202ENST00000389416 Q6ZVQ6 151 aa8.64□□□□□ -1.03
PTPRN2-202ENST00000389416 TENM4Q6N022 2769 aa8.63□□□□□ -1.03
PTPRN2-202ENST00000389416 NIPBLQ6KC79 2804 aaeCLIP8.63□□□□□ -1.03
PTPRN2-202ENST00000389416 A0A087WTM6 91 aa8.63□□□□□ -1.03
PTPRN2-202ENST00000389416 NF1P21359 2839 aa8.63□□□□□ -1.03
PTPRN2-202ENST00000389416 NDUFC1O43677 76 aa8.63□□□□□ -1.03
PTPRN2-202ENST00000389416 ATP5EP56381 51 aaPredicted RBP8.63□□□□□ -1.03
PTPRN2-202ENST00000389416 FAM30AQ9NZY2 134 aa8.63□□□□□ -1.03
PTPRN2-202ENST00000389416 SNURFQ9Y675 71 aa8.62□□□□□ -1.03
PTPRN2-202ENST00000389416 TRBV7-6A0A0J9YX20 115 aa8.62□□□□□ -1.03
PTPRN2-202ENST00000389416 IGLV6-57P01721 117 aa8.62□□□□□ -1.03
PTPRN2-202ENST00000389416 LINC01547P58512 204 aaPredicted RBP8.62□□□□□ -1.03
PTPRN2-202ENST00000389416 SMIM26A0A096LP01 95 aa8.61□□□□□ -1.03
PTPRN2-202ENST00000389416 SPTSSBQ8NFR3 76 aa8.61□□□□□ -1.03
PTPRN2-202ENST00000389416 HRNRQ86YZ3 2850 aaPredicted RBP8.61□□□□□ -1.03
PTPRN2-202ENST00000389416 PRR4Q16378 134 aa8.6□□□□□ -1.03
PTPRN2-202ENST00000389416 CASC2Q6XLA1 102 aa8.6□□□□□ -1.03
PTPRN2-202ENST00000389416 C9orf163Q8N9P6 203 aa8.6□□□□□ -1.03
PTPRN2-202ENST00000389416 STAB2Q8WWQ8 2551 aa8.6□□□□□ -1.03
PTPRN2-202ENST00000389416 Q8N9L7 120 aa8.6□□□□□ -1.03
PTPRN2-202ENST00000389416 CDIP1Q9H305 208 aa8.6□□□□□ -1.03
PTPRN2-202ENST00000389416 PRO0461Q9UI25 63 aa8.6□□□□□ -1.03
PTPRN2-202ENST00000389416 C9orf129Q5T035 196 aaKnown RBP8.59□□□□□ -1.03
PTPRN2-202ENST00000389416 BCE1O60756 84 aa8.59□□□□□ -1.04
PTPRN2-202ENST00000389416 DCHS2Q6V1P9 2916 aa8.58□□□□□ -1.04
PTPRN2-202ENST00000389416 FAM229AH3BQW9 127 aa8.58□□□□□ -1.04
PTPRN2-202ENST00000389416 SPACA4Q8TDM5 124 aa8.57□□□□□ -1.04
PTPRN2-202ENST00000389416 IGLV1-50A0A075B6I6 118 aa8.57□□□□□ -1.04
PTPRN2-202ENST00000389416 LINC00476Q8WZB0 136 aa8.57□□□□□ -1.04
PTPRN2-202ENST00000389416 RELNP78509 3460 aa8.56□□□□□ -1.04
PTPRN2-202ENST00000389416 CRYGAP11844 174 aa8.55□□□□□ -1.04
PTPRN2-202ENST00000389416 KCNQ1DNQ9H478 68 aa8.55□□□□□ -1.04
PTPRN2-202ENST00000389416 SERP1Q9Y6X1 66 aa8.55□□□□□ -1.04
PTPRN2-202ENST00000389416 DCHS1Q96JQ0 3298 aa8.55□□□□□ -1.04
PTPRN2-202ENST00000389416 RETNLBQ9BQ08 111 aa8.54□□□□□ -1.04
PTPRN2-202ENST00000389416 LINC00208Q96KT6 92 aa8.54□□□□□ -1.04
PTPRN2-202ENST00000389416 FBN2P35556 2912 aa8.54□□□□□ -1.04
PTPRN2-202ENST00000389416 LINC00528Q8N1L1 170 aa8.53□□□□□ -1.04
PTPRN2-202ENST00000389416 FAM104AQ969W3 186 aa8.53□□□□□ -1.04
PTPRN2-202ENST00000389416 LIMD2Q9BT23 127 aa8.53□□□□□ -1.04
PTPRN2-202ENST00000389416 A0A1W2PNN7 141 aa8.52□□□□□ -1.05
PTPRN2-202ENST00000389416 SMR3BP02814 79 aaPredicted RBP8.52□□□□□ -1.05
PTPRN2-202ENST00000389416 Q8NBF4 154 aa8.52□□□□□ -1.05
PTPRN2-202ENST00000389416 TLX1NBP0CAT3 122 aa8.5□□□□□ -1.05
PTPRN2-202ENST00000389416 Q6ZQT0 140 aa8.5□□□□□ -1.05
PTPRN2-202ENST00000389416 TYMSOSQ8TAI1 123 aa8.5□□□□□ -1.05
PTPRN2-202ENST00000389416 LAMA5O15230 3695 aa8.49□□□□□ -1.05
PTPRN2-202ENST00000389416 TRAV7A0A075B6U4 112 aa8.49□□□□□ -1.05
PTPRN2-202ENST00000389416 TNP2Q05952 138 aa8.49□□□□□ -1.05
PTPRN2-202ENST00000389416 TRBV7-7A0A0K0K1E9 115 aa8.48□□□□□ -1.05
PTPRN2-202ENST00000389416 PLA2G1BP04054 148 aaKnown RBP8.48□□□□□ -1.05
PTPRN2-202ENST00000389416 RPL37AP61513 92 aaKnown RBP8.48□□□□□ -1.05
PTPRN2-202ENST00000389416 CNBPP62633 177 aaKnown RBP8.48□□□□□ -1.05
PTPRN2-202ENST00000389416 HCG22E2RYF7 251 aa8.47□□□□□ -1.05
PTPRN2-202ENST00000389416 WDFY3Q8IZQ1 3526 aa8.47□□□□□ -1.05
PTPRN2-202ENST00000389416 PRO0628Q9UI54 55 aa8.46□□□□□ -1.05
PTPRN2-202ENST00000389416 CXCL6P80162 114 aa8.45□□□□□ -1.06
PTPRN2-202ENST00000389416 ASPMQ8IZT6 3477 aa8.45□□□□□ -1.06
PTPRN2-202ENST00000389416 LOC110117498A0A087WWA1 95 aa8.44□□□□□ -1.06
PTPRN2-202ENST00000389416 ZNF861PO60384 105 aa8.44□□□□□ -1.06
PTPRN2-202ENST00000389416 ANAPC11Q9NYG5 84 aa8.44□□□□□ -1.06
PTPRN2-202ENST00000389416 SEC61GP60059 68 aa8.44□□□□□ -1.06
PTPRN2-202ENST00000389416 PCOTHQ58A44 107 aa8.44□□□□□ -1.06
PTPRN2-202ENST00000389416 RPS28P62857 69 aaKnown RBP8.43□□□□□ -1.06
PTPRN2-202ENST00000389416 PSORS1C2Q9UIG4 136 aa8.43□□□□□ -1.06
PTPRN2-202ENST00000389416 A0A0G2JQZ4 141 aa8.43□□□□□ -1.06
PTPRN2-202ENST00000389416 PLA2G2DQ9UNK4 145 aa8.42□□□□□ -1.06
PTPRN2-202ENST00000389416 Q8N377 158 aa8.42□□□□□ -1.06
PTPRN2-202ENST00000389416 DMDP11532 3685 aa8.42□□□□□ -1.06
PTPRN2-202ENST00000389416 A6NED7 52 aa8.41□□□□□ -1.06
PTPRN2-202ENST00000389416 ERC2-IT1O76042 136 aa8.41□□□□□ -1.06
PTPRN2-202ENST00000389416 LINC00336Q6ZUF6 198 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 140.2 ms