RNA–Protein interactions for RNA: ENST00000380821.7

SNAPC3-202, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 5,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-202ENST00000380821 MUC4Q99102 2169 aa11.02□□□□□ -0.64
SNAPC3-202ENST00000380821 CNBPP62633 177 aaKnown RBP11.02□□□□□ -0.64
SNAPC3-202ENST00000380821 PRAC1Q96KF2 57 aa11.02□□□□□ -0.64
SNAPC3-202ENST00000380821 A0A096LNT2 108 aa11.02□□□□□ -0.65
SNAPC3-202ENST00000380821 NOTCH2Q04721 2471 aa11.01□□□□□ -0.65
SNAPC3-202ENST00000380821 A0A087WTM6 91 aa11.01□□□□□ -0.65
SNAPC3-202ENST00000380821 IGLV7-43P04211 117 aa11.01□□□□□ -0.65
SNAPC3-202ENST00000380821 C9orf92A6NGG3 77 aa10.99□□□□□ -0.65
SNAPC3-202ENST00000380821 LUZP6Q538Z0 58 aa10.99□□□□□ -0.65
SNAPC3-202ENST00000380821 CACNA1AO00555 2505 aa10.98□□□□□ -0.65
SNAPC3-202ENST00000380821 K7EIL1 84 aa10.98□□□□□ -0.65
SNAPC3-202ENST00000380821 KRTAP10-3P60369 221 aa10.97□□□□□ -0.65
SNAPC3-202ENST00000380821 FP248Q71RG6 208 aaPredicted RBP10.94□□□□□ -0.66
SNAPC3-202ENST00000380821 PSORS1C2Q9UIG4 136 aa10.94□□□□□ -0.66
SNAPC3-202ENST00000380821 PIEZO2Q9H5I5 2752 aa10.93□□□□□ -0.66
SNAPC3-202ENST00000380821 CCDC168Q8NDH2 2452 aa10.93□□□□□ -0.66
SNAPC3-202ENST00000380821 ANAPC11Q9NYG5 84 aa10.93□□□□□ -0.66
SNAPC3-202ENST00000380821 Q75L30 129 aa10.93□□□□□ -0.66
SNAPC3-202ENST00000380821 IGF2RP11717 2491 aa10.92□□□□□ -0.66
SNAPC3-202ENST00000380821 IGLV7-46A0A075B6I9 117 aa10.91□□□□□ -0.66
SNAPC3-202ENST00000380821 ZNF575Q86XF7 245 aa10.91□□□□□ -0.66
SNAPC3-202ENST00000380821 CASC10Q5T4H9 136 aa10.9□□□□□ -0.66
SNAPC3-202ENST00000380821 FAM229BQ4G0N7 80 aa10.9□□□□□ -0.67
SNAPC3-202ENST00000380821 A0A0A0MQY5 61 aa10.89□□□□□ -0.67
SNAPC3-202ENST00000380821 Q8N1X5 172 aa10.87□□□□□ -0.67
SNAPC3-202ENST00000380821 COX6B2Q6YFQ2 88 aa10.87□□□□□ -0.67
SNAPC3-202ENST00000380821 ABCA2Q9BZC7 2435 aa10.86□□□□□ -0.67
SNAPC3-202ENST00000380821 A0A0D9SG42 100 aa10.83□□□□□ -0.68
SNAPC3-202ENST00000380821 J3QL48 77 aa10.83□□□□□ -0.68
SNAPC3-202ENST00000380821 CSAG1Q6PB30 78 aa10.82□□□□□ -0.68
SNAPC3-202ENST00000380821 CYSTM1Q9H1C7 97 aa10.81□□□□□ -0.68
SNAPC3-202ENST00000380821 PRR26Q8N8Z3 221 aa10.81□□□□□ -0.68
SNAPC3-202ENST00000380821 LINC01558Q9Y6Z2 57 aa10.8□□□□□ -0.68
SNAPC3-202ENST00000380821 NCOR2Q9Y618 2525 aa10.8□□□□□ -0.68
SNAPC3-202ENST00000380821 MYO9AB2RTY4 2548 aa10.79□□□□□ -0.68
SNAPC3-202ENST00000380821 TLN1Q9Y490 2541 aaKnown RBP10.77□□□□□ -0.69
SNAPC3-202ENST00000380821 ZNF462Q96JM2 2506 aa10.76□□□□□ -0.69
SNAPC3-202ENST00000380821 HRES1P13985 223 aa10.75□□□□□ -0.69
SNAPC3-202ENST00000380821 OXTP01178 125 aa10.74□□□□□ -0.69
SNAPC3-202ENST00000380821 Q5VV11 94 aa10.73□□□□□ -0.69
SNAPC3-202ENST00000380821 A0A1B0GU33 70 aa10.73□□□□□ -0.69
SNAPC3-202ENST00000380821 Q8N9P0 234 aaPredicted RBP10.73□□□□□ -0.69
SNAPC3-202ENST00000380821 MMP24-AS1A0A0U1RRL7 71 aa10.71□□□□□ -0.69
SNAPC3-202ENST00000380821 LRRK2Q5S007 2527 aa10.7□□□□□ -0.7
SNAPC3-202ENST00000380821 FN1P02751 2386 aaKnown RBP10.7□□□□□ -0.7
SNAPC3-202ENST00000380821 DMAC1Q96GE9 116 aa10.69□□□□□ -0.7
SNAPC3-202ENST00000380821 SMR3BP02814 79 aaPredicted RBP10.69□□□□□ -0.7
SNAPC3-202ENST00000380821 KRTAP1-3Q8IUG1 177 aa10.68□□□□□ -0.7
SNAPC3-202ENST00000380821 MYO18BQ8IUG5 2567 aa10.68□□□□□ -0.7
SNAPC3-202ENST00000380821 KRTAP16-1A8MUX0 517 aa10.68□□□□□ -0.7
SNAPC3-202ENST00000380821 DOPEY1Q5JWR5 2465 aa10.63□□□□□ -0.71
SNAPC3-202ENST00000380821 SPRR1AP35321 89 aa10.63□□□□□ -0.71
SNAPC3-202ENST00000380821 ABCA12Q86UK0 2595 aa10.63□□□□□ -0.71
SNAPC3-202ENST00000380821 EP400Q96L91 3159 aa10.61□□□□□ -0.71
SNAPC3-202ENST00000380821 KRTAP1-1Q07627 177 aa10.61□□□□□ -0.71
SNAPC3-202ENST00000380821 Q8NDZ9 215 aa10.58□□□□□ -0.72
SNAPC3-202ENST00000380821 ZCCHC13Q8WW36 166 aaKnown RBP10.58□□□□□ -0.72
SNAPC3-202ENST00000380821 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.57□□□□□ -0.72
SNAPC3-202ENST00000380821 SPINK7P58062 85 aa10.57□□□□□ -0.72
SNAPC3-202ENST00000380821 LINC00483Q53H64 154 aa10.57□□□□□ -0.72
SNAPC3-202ENST00000380821 SPRR1BP22528 89 aa10.55□□□□□ -0.72
SNAPC3-202ENST00000380821 USP9XQ93008 2570 aaPredicted RBP10.54□□□□□ -0.72
SNAPC3-202ENST00000380821 LINC00472Q9H8W2 130 aa10.54□□□□□ -0.72
SNAPC3-202ENST00000380821 Q6ZSA8 131 aa10.52□□□□□ -0.73
SNAPC3-202ENST00000380821 Q5W150 140 aa10.52□□□□□ -0.73
SNAPC3-202ENST00000380821 PLAC8Q9NZF1 115 aa10.51□□□□□ -0.73
SNAPC3-202ENST00000380821 PIEZO1Q92508 2521 aa10.49□□□□□ -0.73
SNAPC3-202ENST00000380821 TNP2Q05952 138 aa10.48□□□□□ -0.73
SNAPC3-202ENST00000380821 S4R3F8 94 aa10.47□□□□□ -0.73
SNAPC3-202ENST00000380821 CAMK2N1Q7Z7J9 78 aa10.47□□□□□ -0.73
SNAPC3-202ENST00000380821 WDR87Q6ZQQ6 2873 aa10.46□□□□□ -0.74
SNAPC3-202ENST00000380821 JMJD1CQ15652 2540 aa10.46□□□□□ -0.74
SNAPC3-202ENST00000380821 ANKRD17O75179 2603 aaKnown RBP10.46□□□□□ -0.74
SNAPC3-202ENST00000380821 TLN2Q9Y4G6 2542 aa10.44□□□□□ -0.74
SNAPC3-202ENST00000380821 CR1P17927 2039 aa10.4□□□□□ -0.74
SNAPC3-202ENST00000380821 KRTAP26-1Q6PEX3 210 aa10.38□□□□□ -0.75
SNAPC3-202ENST00000380821 SRCAPQ6ZRS2 3230 aa10.38□□□□□ -0.75
SNAPC3-202ENST00000380821 ASB16-AS1Q495Z4 193 aa10.38□□□□□ -0.75
SNAPC3-202ENST00000380821 ANKRD11Q6UB99 2663 aaPredicted RBP10.38□□□□□ -0.75
SNAPC3-202ENST00000380821 PKD1L2Q7Z442 2459 aa10.34□□□□□ -0.75
SNAPC3-202ENST00000380821 USP9YO00507 2555 aaPredicted RBP10.32□□□□□ -0.76
SNAPC3-202ENST00000380821 ROMO1P60602 79 aa10.32□□□□□ -0.76
SNAPC3-202ENST00000380821 Q6ZR54 194 aa10.3□□□□□ -0.76
SNAPC3-202ENST00000380821 ZFYVE26Q68DK2 2539 aa10.29□□□□□ -0.76
SNAPC3-202ENST00000380821 A6NN06 94 aa10.29□□□□□ -0.76
SNAPC3-202ENST00000380821 RPL37P61927 97 aaKnown RBP10.27□□□□□ -0.77
SNAPC3-202ENST00000380821 H1FX-AS1Q4G0G2 97 aa10.27□□□□□ -0.77
SNAPC3-202ENST00000380821 CEP295Q9C0D2 2601 aa10.25□□□□□ -0.77
SNAPC3-202ENST00000380821 SETD2Q9BYW2 2564 aaPredicted RBP10.25□□□□□ -0.77
SNAPC3-202ENST00000380821 KRTAP29-1A8MX34 341 aaPredicted RBP10.21□□□□□ -0.77
SNAPC3-202ENST00000380821 R4GN34 69 aa10.18□□□□□ -0.78
SNAPC3-202ENST00000380821 F8P00451 2351 aa10.18□□□□□ -0.78
SNAPC3-202ENST00000380821 KRTAP4-16G5E9R7 235 aaPredicted RBP10.18□□□□□ -0.78
SNAPC3-202ENST00000380821 NDUFAF8A1L188 74 aa10.17□□□□□ -0.78
SNAPC3-202ENST00000380821 CHD8Q9HCK8 2581 aa10.16□□□□□ -0.78
SNAPC3-202ENST00000380821 KRTAP1-5Q9BYS1 174 aa10.15□□□□□ -0.78
SNAPC3-202ENST00000380821 MTORP42345 2549 aa10.15□□□□□ -0.79
SNAPC3-202ENST00000380821 POLQO75417 2590 aa10.13□□□□□ -0.79
SNAPC3-202ENST00000380821 M0R2T5 61 aa10.11□□□□□ -0.79
SNAPC3-202ENST00000380821 KRTAP25-1Q3LHN0 102 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms