RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 IGFL1Q6UW32 110 aa6.37□□□□□ -1.39
SNX1-202ENST00000380285 TYMSOSQ8TAI1 123 aa6.37□□□□□ -1.39
SNX1-202ENST00000380285 C8orf17Q9NRJ1 99 aa6.37□□□□□ -1.39
SNX1-202ENST00000380285 RTL8CO15255 209 aa6.37□□□□□ -1.39
SNX1-202ENST00000380285 A0A1B0GVX0 72 aa6.37□□□□□ -1.39
SNX1-202ENST00000380285 DNAH12Q6ZR08 3092 aa6.36□□□□□ -1.39
SNX1-202ENST00000380285 CEP295Q9C0D2 2601 aa6.36□□□□□ -1.39
SNX1-202ENST00000380285 CRIPTQ9P021 101 aa6.36□□□□□ -1.39
SNX1-202ENST00000380285 MTORP42345 2549 aa6.36□□□□□ -1.39
SNX1-202ENST00000380285 Q8N377 158 aa6.36□□□□□ -1.39
SNX1-202ENST00000380285 LINC00612Q8N6U2 182 aa6.35□□□□□ -1.39
SNX1-202ENST00000380285 Q1T7F1 81 aa6.34□□□□□ -1.39
SNX1-202ENST00000380285 CDC42SE1Q9NRR8 79 aa6.34□□□□□ -1.4
SNX1-202ENST00000380285 Q96NJ1 140 aa6.33□□□□□ -1.4
SNX1-202ENST00000380285 CHD8Q9HCK8 2581 aa6.33□□□□□ -1.4
SNX1-202ENST00000380285 FLG2Q5D862 2391 aaPredicted RBP6.33□□□□□ -1.4
SNX1-202ENST00000380285 CR1P17927 2039 aa6.33□□□□□ -1.4
SNX1-202ENST00000380285 EIF4EBP3O60516 100 aaPredicted RBP6.33□□□□□ -1.4
SNX1-202ENST00000380285 RBM12B-AS1Q9P1G2 102 aa6.32□□□□□ -1.4
SNX1-202ENST00000380285 C15orf56Q8N910 161 aa6.31□□□□□ -1.4
SNX1-202ENST00000380285 SPTBN4Q9H254 2564 aa6.31□□□□□ -1.4
SNX1-202ENST00000380285 FAM168BA1KXE4 195 aa6.31□□□□□ -1.4
SNX1-202ENST00000380285 IGLV5-48A0A075B6I7 105 aa6.3□□□□□ -1.4
SNX1-202ENST00000380285 APLNQ9ULZ1 77 aa6.29□□□□□ -1.4
SNX1-202ENST00000380285 ZNF861PO60384 105 aa6.29□□□□□ -1.4
SNX1-202ENST00000380285 CHTF8P0CG12 524 aa6.29□□□□□ -1.4
SNX1-202ENST00000380285 C9orf129Q5T035 196 aaKnown RBP6.28□□□□□ -1.4
SNX1-202ENST00000380285 IGLV5-37A0A075B6J1 123 aa6.28□□□□□ -1.4
SNX1-202ENST00000380285 OCR1Q9BZK8 76 aa6.27□□□□□ -1.41
SNX1-202ENST00000380285 EP400Q96L91 3159 aa6.26□□□□□ -1.41
SNX1-202ENST00000380285 CNBPP62633 177 aaKnown RBP6.24□□□□□ -1.41
SNX1-202ENST00000380285 GIG44P09565 113 aaPredicted RBP6.24□□□□□ -1.41
SNX1-202ENST00000380285 SPRR4Q96PI1 79 aa6.23□□□□□ -1.41
SNX1-202ENST00000380285 C19orf73Q9NVV2 129 aa6.23□□□□□ -1.41
SNX1-202ENST00000380285 A0A1W2PNM2 257 aa6.23□□□□□ -1.41
SNX1-202ENST00000380285 C9orf163Q8N9P6 203 aa6.23□□□□□ -1.41
SNX1-202ENST00000380285 LUZP6Q538Z0 58 aa6.22□□□□□ -1.41
SNX1-202ENST00000380285 FAM104AQ969W3 186 aa6.22□□□□□ -1.41
SNX1-202ENST00000380285 DSCR10P59022 87 aa6.22□□□□□ -1.41
SNX1-202ENST00000380285 Q75L30 129 aa6.22□□□□□ -1.41
SNX1-202ENST00000380285 LINC00304Q8N9R0 145 aa6.21□□□□□ -1.42
SNX1-202ENST00000380285 IGLV7-46A0A075B6I9 117 aa6.2□□□□□ -1.42
SNX1-202ENST00000380285 BPTFQ12830 3046 aa6.2□□□□□ -1.42
SNX1-202ENST00000380285 PRRC2CQ9Y520 2896 aaKnown RBP6.2□□□□□ -1.42
SNX1-202ENST00000380285 A0A0A0MQY5 61 aa6.2□□□□□ -1.42
SNX1-202ENST00000380285 KRTAP24-1Q3LI83 254 aa6.18□□□□□ -1.42
SNX1-202ENST00000380285 LINC01554Q52M75 96 aa6.18□□□□□ -1.42
SNX1-202ENST00000380285 COX6B2Q6YFQ2 88 aa6.18□□□□□ -1.42
SNX1-202ENST00000380285 POLQO75417 2590 aa6.18□□□□□ -1.42
SNX1-202ENST00000380285 A0A096LNT2 108 aa6.17□□□□□ -1.42
SNX1-202ENST00000380285 LAMA2P24043 3122 aaKnown RBP6.16□□□□□ -1.42
SNX1-202ENST00000380285 IGLV7-43P04211 117 aa6.16□□□□□ -1.42
SNX1-202ENST00000380285 WWC2-AS2Q96NR7 200 aa6.15□□□□□ -1.43
SNX1-202ENST00000380285 A0A087WTM6 91 aa6.14□□□□□ -1.43
SNX1-202ENST00000380285 ZNF575Q86XF7 245 aa6.14□□□□□ -1.43
SNX1-202ENST00000380285 LINC01558Q9Y6Z2 57 aa6.12□□□□□ -1.43
SNX1-202ENST00000380285 Q5XG85 94 aa6.12□□□□□ -1.43
SNX1-202ENST00000380285 J3QL48 77 aa6.11□□□□□ -1.43
SNX1-202ENST00000380285 LAMA3Q16787 3333 aa6.11□□□□□ -1.43
SNX1-202ENST00000380285 A0A1W2PNN7 141 aa6.11□□□□□ -1.43
SNX1-202ENST00000380285 PSORS1C2Q9UIG4 136 aa6.11□□□□□ -1.43
SNX1-202ENST00000380285 KRTAP10-11P60412 298 aa6.1□□□□□ -1.43
SNX1-202ENST00000380285 A0A0D9SG42 100 aa6.09□□□□□ -1.44
SNX1-202ENST00000380285 K7EIL1 84 aa6.09□□□□□ -1.44
SNX1-202ENST00000380285 USP24Q9UPU5 2620 aa6.08□□□□□ -1.44
SNX1-202ENST00000380285 Q8N9P0 234 aaPredicted RBP6.08□□□□□ -1.44
SNX1-202ENST00000380285 C9orf92A6NGG3 77 aa6.07□□□□□ -1.44
SNX1-202ENST00000380285 FASNP49327 2511 aaKnown RBP6.07□□□□□ -1.44
SNX1-202ENST00000380285 A0A0G2JQZ4 141 aa6.06□□□□□ -1.44
SNX1-202ENST00000380285 KRTAP16-1A8MUX0 517 aa6.06□□□□□ -1.44
SNX1-202ENST00000380285 LINC00483Q53H64 154 aa6.06□□□□□ -1.44
SNX1-202ENST00000380285 FP248Q71RG6 208 aaPredicted RBP6.05□□□□□ -1.44
SNX1-202ENST00000380285 A0A1B0GU33 70 aa6.05□□□□□ -1.44
SNX1-202ENST00000380285 FAM229BQ4G0N7 80 aa6.05□□□□□ -1.44
SNX1-202ENST00000380285 PRR26Q8N8Z3 221 aa6.04□□□□□ -1.44
SNX1-202ENST00000380285 SPRR1AP35321 89 aa6.04□□□□□ -1.44
SNX1-202ENST00000380285 XIRP2A4UGR9 3374 aa6.03□□□□□ -1.44
SNX1-202ENST00000380285 ASB16-AS1Q495Z4 193 aa6.03□□□□□ -1.44
SNX1-202ENST00000380285 SEC61BP60468 96 aaKnown RBP6.02□□□□□ -1.45
SNX1-202ENST00000380285 HRES1P13985 223 aa6.02□□□□□ -1.45
SNX1-202ENST00000380285 KRTAP10-3P60369 221 aa6.01□□□□□ -1.45
SNX1-202ENST00000380285 MMP24-AS1A0A0U1RRL7 71 aa6.01□□□□□ -1.45
SNX1-202ENST00000380285 Q8N1X5 172 aa6.01□□□□□ -1.45
SNX1-202ENST00000380285 DMAC1Q96GE9 116 aa6.01□□□□□ -1.45
SNX1-202ENST00000380285 Q5VV11 94 aa6□□□□□ -1.45
SNX1-202ENST00000380285 SPRR1BP22528 89 aa6□□□□□ -1.45
SNX1-202ENST00000380285 ANAPC11Q9NYG5 84 aa5.98□□□□□ -1.45
SNX1-202ENST00000380285 CASC10Q5T4H9 136 aa5.98□□□□□ -1.45
SNX1-202ENST00000380285 C5orf42Q9H799 3197 aa5.98□□□□□ -1.45
SNX1-202ENST00000380285 CDH23Q9H251 3354 aa5.97□□□□□ -1.45
SNX1-202ENST00000380285 LINC00472Q9H8W2 130 aa5.96□□□□□ -1.46
SNX1-202ENST00000380285 CYSTM1Q9H1C7 97 aa5.95□□□□□ -1.46
SNX1-202ENST00000380285 BRCA2P51587 3418 aa5.94□□□□□ -1.46
SNX1-202ENST00000380285 FLNAP21333 2647 aaKnown RBP5.94□□□□□ -1.46
SNX1-202ENST00000380285 ZCCHC13Q8WW36 166 aaKnown RBP5.94□□□□□ -1.46
SNX1-202ENST00000380285 KRTAP1-3Q8IUG1 177 aa5.93□□□□□ -1.46
SNX1-202ENST00000380285 CAMK2N1Q7Z7J9 78 aa5.93□□□□□ -1.46
SNX1-202ENST00000380285 TNP2Q05952 138 aa5.93□□□□□ -1.46
SNX1-202ENST00000380285 CFAP54Q96N23 3096 aa5.92□□□□□ -1.46
SNX1-202ENST00000380285 PLAC8Q9NZF1 115 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms