RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 CDC42SE1Q9NRR8 79 aa10.64□□□□□ -0.71
RGP1-201ENST00000378078 TTC28Q96AY4 2481 aa10.6□□□□□ -0.71
RGP1-201ENST00000378078 ERC2-IT1O76042 136 aa10.6□□□□□ -0.71
RGP1-201ENST00000378078 KCNQ1DNQ9H478 68 aa10.6□□□□□ -0.71
RGP1-201ENST00000378078 PLA2G2DQ9UNK4 145 aa10.6□□□□□ -0.71
RGP1-201ENST00000378078 PRR26Q8N8Z3 221 aa10.6□□□□□ -0.71
RGP1-201ENST00000378078 FN1P02751 2386 aaKnown RBP10.6□□□□□ -0.71
RGP1-201ENST00000378078 MYO18BQ8IUG5 2567 aa10.59□□□□□ -0.71
RGP1-201ENST00000378078 C10orf142B7Z368 130 aa10.59□□□□□ -0.71
RGP1-201ENST00000378078 EIF4EBP3O60516 100 aaPredicted RBP10.58□□□□□ -0.72
RGP1-201ENST00000378078 PRO0461Q9UI25 63 aa10.58□□□□□ -0.72
RGP1-201ENST00000378078 TLN1Q9Y490 2541 aaKnown RBP10.58□□□□□ -0.72
RGP1-201ENST00000378078 WIPF1O43516 503 aa10.57□□□□□ -0.72
RGP1-201ENST00000378078 A0A1B0GW54 56 aa10.56□□□□□ -0.72
RGP1-201ENST00000378078 LITAFQ99732 161 aa10.56□□□□□ -0.72
RGP1-201ENST00000378078 LUZP6Q538Z0 58 aa10.56□□□□□ -0.72
RGP1-201ENST00000378078 FAM104AQ969W3 186 aa10.56□□□□□ -0.72
RGP1-201ENST00000378078 DNAH12Q6ZR08 3092 aa10.54□□□□□ -0.72
RGP1-201ENST00000378078 TNP2Q05952 138 aa10.54□□□□□ -0.72
RGP1-201ENST00000378078 IGLV7-46A0A075B6I9 117 aa10.54□□□□□ -0.72
RGP1-201ENST00000378078 ZFYVE26Q68DK2 2539 aa10.54□□□□□ -0.72
RGP1-201ENST00000378078 JMJD1CQ15652 2540 aa10.53□□□□□ -0.72
RGP1-201ENST00000378078 C19orf73Q9NVV2 129 aa10.51□□□□□ -0.73
RGP1-201ENST00000378078 LINC00612Q8N6U2 182 aa10.51□□□□□ -0.73
RGP1-201ENST00000378078 NCOR2Q9Y618 2525 aa10.5□□□□□ -0.73
RGP1-201ENST00000378078 SPRR4Q96PI1 79 aa10.49□□□□□ -0.73
RGP1-201ENST00000378078 PCNTO95613 3336 aa10.49□□□□□ -0.73
RGP1-201ENST00000378078 LINC00483Q53H64 154 aa10.46□□□□□ -0.73
RGP1-201ENST00000378078 CYP4F30PQ9H0H9 118 aa10.45□□□□□ -0.74
RGP1-201ENST00000378078 C9orf163Q8N9P6 203 aa10.45□□□□□ -0.74
RGP1-201ENST00000378078 TLX1NBP0CAT3 122 aa10.44□□□□□ -0.74
RGP1-201ENST00000378078 CD164Q04900 197 aa10.43□□□□□ -0.74
RGP1-201ENST00000378078 ABCA12Q86UK0 2595 aa10.42□□□□□ -0.74
RGP1-201ENST00000378078 C5orf42Q9H799 3197 aa10.42□□□□□ -0.74
RGP1-201ENST00000378078 RPS28P62857 69 aaKnown RBP10.42□□□□□ -0.74
RGP1-201ENST00000378078 GIG44P09565 113 aaPredicted RBP10.41□□□□□ -0.74
RGP1-201ENST00000378078 ANKRD17O75179 2603 aaKnown RBP10.4□□□□□ -0.74
RGP1-201ENST00000378078 CR1P17927 2039 aa10.38□□□□□ -0.75
RGP1-201ENST00000378078 S4R3F8 94 aa10.38□□□□□ -0.75
RGP1-201ENST00000378078 PRR34Q9NV39 138 aa10.37□□□□□ -0.75
RGP1-201ENST00000378078 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.36□□□□□ -0.75
RGP1-201ENST00000378078 A0A1W2PNM2 257 aa10.32□□□□□ -0.76
RGP1-201ENST00000378078 KTN1-AS1Q86SY8 53 aa10.31□□□□□ -0.76
RGP1-201ENST00000378078 TLN2Q9Y4G6 2542 aa10.29□□□□□ -0.76
RGP1-201ENST00000378078 ACANP16112 2415 aa10.29□□□□□ -0.76
RGP1-201ENST00000378078 A0A1B0GU33 70 aa10.27□□□□□ -0.76
RGP1-201ENST00000378078 LCA10Q71F78 164 aa10.27□□□□□ -0.76
RGP1-201ENST00000378078 Q5VSD8 79 aa10.27□□□□□ -0.76
RGP1-201ENST00000378078 Q1T7F1 81 aa10.27□□□□□ -0.77
RGP1-201ENST00000378078 F8P00451 2351 aa10.26□□□□□ -0.77
RGP1-201ENST00000378078 H7BZZ5 65 aa10.25□□□□□ -0.77
RGP1-201ENST00000378078 CNBPP62633 177 aaKnown RBP10.23□□□□□ -0.77
RGP1-201ENST00000378078 HRES1P13985 223 aa10.21□□□□□ -0.77
RGP1-201ENST00000378078 A0A096LNT2 108 aa10.17□□□□□ -0.78
RGP1-201ENST00000378078 KLKP1Q107X0 134 aa10.17□□□□□ -0.78
RGP1-201ENST00000378078 R4GN34 69 aa10.16□□□□□ -0.78
RGP1-201ENST00000378078 KRTAP1-3Q8IUG1 177 aa10.15□□□□□ -0.78
RGP1-201ENST00000378078 SETD2Q9BYW2 2564 aaPredicted RBP10.15□□□□□ -0.78
RGP1-201ENST00000378078 CSAG1Q6PB30 78 aa10.15□□□□□ -0.79
RGP1-201ENST00000378078 PRAC1Q96KF2 57 aa10.13□□□□□ -0.79
RGP1-201ENST00000378078 Q8N9P0 234 aaPredicted RBP10.13□□□□□ -0.79
RGP1-201ENST00000378078 ZNF462Q96JM2 2506 aa10.12□□□□□ -0.79
RGP1-201ENST00000378078 XIRP2A4UGR9 3374 aa10.12□□□□□ -0.79
RGP1-201ENST00000378078 BPTFQ12830 3046 aa10.1□□□□□ -0.79
RGP1-201ENST00000378078 ZCCHC13Q8WW36 166 aaKnown RBP10.1□□□□□ -0.79
RGP1-201ENST00000378078 SPINK7P58062 85 aa10.09□□□□□ -0.79
RGP1-201ENST00000378078 FAM229BQ4G0N7 80 aa10.08□□□□□ -0.8
RGP1-201ENST00000378078 SPANXA2-OT1Q8N9U9 137 aa10.06□□□□□ -0.8
RGP1-201ENST00000378078 CEP350Q5VT06 3117 aa10.05□□□□□ -0.8
RGP1-201ENST00000378078 KRTAP1-1Q07627 177 aa10.05□□□□□ -0.8
RGP1-201ENST00000378078 H1FX-AS1Q4G0G2 97 aa10.05□□□□□ -0.8
RGP1-201ENST00000378078 MKI67P46013 3256 aaKnown RBP10.03□□□□□ -0.8
RGP1-201ENST00000378078 M0QZ58 72 aa10.03□□□□□ -0.8
RGP1-201ENST00000378078 PLAC4Q8WY50 150 aa10.02□□□□□ -0.81
RGP1-201ENST00000378078 USP9XQ93008 2570 aaPredicted RBP10□□□□□ -0.81
RGP1-201ENST00000378078 PKD1L2Q7Z442 2459 aa10□□□□□ -0.81
RGP1-201ENST00000378078 DMAC1Q96GE9 116 aa9.99□□□□□ -0.81
RGP1-201ENST00000378078 ANKRD11Q6UB99 2663 aaPredicted RBP9.99□□□□□ -0.81
RGP1-201ENST00000378078 POLQO75417 2590 aa9.99□□□□□ -0.81
RGP1-201ENST00000378078 SEC61BP60468 96 aaKnown RBP9.97□□□□□ -0.81
RGP1-201ENST00000378078 ADM2Q7Z4H4 148 aa9.96□□□□□ -0.82
RGP1-201ENST00000378078 KLK9Q2XQG4 91 aa9.95□□□□□ -0.82
RGP1-201ENST00000378078 Q5W150 140 aa9.95□□□□□ -0.82
RGP1-201ENST00000378078 SPTBN4Q9H254 2564 aa9.95□□□□□ -0.82
RGP1-201ENST00000378078 OCR1Q9BZK8 76 aa9.94□□□□□ -0.82
RGP1-201ENST00000378078 KRTAP10-2P60368 255 aa9.93□□□□□ -0.82
RGP1-201ENST00000378078 BRCA2P51587 3418 aa9.92□□□□□ -0.82
RGP1-201ENST00000378078 PIEZO1Q92508 2521 aa9.91□□□□□ -0.82
RGP1-201ENST00000378078 KRTAP10-1P60331 282 aa9.91□□□□□ -0.82
RGP1-201ENST00000378078 SPATA8Q6RVD6 105 aa9.91□□□□□ -0.82
RGP1-201ENST00000378078 PLAC8Q9NZF1 115 aa9.9□□□□□ -0.82
RGP1-201ENST00000378078 MMP24-AS1A0A0U1RRL7 71 aa9.9□□□□□ -0.83
RGP1-201ENST00000378078 H3BS24 57 aa9.88□□□□□ -0.83
RGP1-201ENST00000378078 A0A0A0MQY5 61 aa9.88□□□□□ -0.83
RGP1-201ENST00000378078 MTORP42345 2549 aa9.86□□□□□ -0.83
RGP1-201ENST00000378078 Q8NDZ9 215 aa9.86□□□□□ -0.83
RGP1-201ENST00000378078 FASNP49327 2511 aaKnown RBP9.85□□□□□ -0.83
RGP1-201ENST00000378078 Q75L30 129 aa9.84□□□□□ -0.83
RGP1-201ENST00000378078 CHD8Q9HCK8 2581 aa9.84□□□□□ -0.83
RGP1-201ENST00000378078 KRTAP1-5Q9BYS1 174 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms