RNA–Protein interactions for RNA: ENST00000377561.6

CNTNAP3B-203, Transcript of contactin associated protein like 3B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 5,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-203ENST00000377561 IGLV1-50A0A075B6I6 118 aa12.41□□□□□ -0.42
CNTNAP3B-203ENST00000377561 C15orf56Q8N910 161 aa12.4□□□□□ -0.42
CNTNAP3B-203ENST00000377561 Q96NJ1 140 aa12.4□□□□□ -0.42
CNTNAP3B-203ENST00000377561 WWC2-AS2Q96NR7 200 aa12.39□□□□□ -0.43
CNTNAP3B-203ENST00000377561 KRTAP1-1Q07627 177 aa12.35□□□□□ -0.43
CNTNAP3B-203ENST00000377561 HECTD1Q9ULT8 2610 aa12.35□□□□□ -0.43
CNTNAP3B-203ENST00000377561 LOC101927531A0A1B0GV80 90 aa12.34□□□□□ -0.43
CNTNAP3B-203ENST00000377561 IGLV8-61A0A075B6I0 122 aa12.34□□□□□ -0.43
CNTNAP3B-203ENST00000377561 C8orf87E5RJ46 101 aa12.34□□□□□ -0.43
CNTNAP3B-203ENST00000377561 A8MWP4 228 aa12.33□□□□□ -0.44
CNTNAP3B-203ENST00000377561 K7EIL1 84 aa12.32□□□□□ -0.44
CNTNAP3B-203ENST00000377561 C9orf129Q5T035 196 aaKnown RBP12.31□□□□□ -0.44
CNTNAP3B-203ENST00000377561 MKI67P46013 3256 aaKnown RBP12.29□□□□□ -0.44
CNTNAP3B-203ENST00000377561 MRPL34Q9BQ48 92 aaKnown RBP12.29□□□□□ -0.44
CNTNAP3B-203ENST00000377561 ERC2-IT1O76042 136 aa12.29□□□□□ -0.44
CNTNAP3B-203ENST00000377561 TLX1NBP0CAT3 122 aa12.28□□□□□ -0.44
CNTNAP3B-203ENST00000377561 FLNBO75369 2602 aaKnown RBP12.28□□□□□ -0.44
CNTNAP3B-203ENST00000377561 J3QL48 77 aa12.28□□□□□ -0.44
CNTNAP3B-203ENST00000377561 LAMA3Q16787 3333 aa12.27□□□□□ -0.44
CNTNAP3B-203ENST00000377561 K7EQZ3 153 aa12.27□□□□□ -0.45
CNTNAP3B-203ENST00000377561 PLA2G2DQ9UNK4 145 aa12.27□□□□□ -0.45
CNTNAP3B-203ENST00000377561 FLNAP21333 2647 aaKnown RBP12.27□□□□□ -0.45
CNTNAP3B-203ENST00000377561 Q8N377 158 aa12.26□□□□□ -0.45
CNTNAP3B-203ENST00000377561 SPINT4Q6UDR6 99 aa12.25□□□□□ -0.45
CNTNAP3B-203ENST00000377561 LINC00336Q6ZUF6 198 aa12.24□□□□□ -0.45
CNTNAP3B-203ENST00000377561 A0A0C4DFX4 3053 aa12.24□□□□□ -0.45
CNTNAP3B-203ENST00000377561 IGFL1Q6UW32 110 aa12.23□□□□□ -0.45
CNTNAP3B-203ENST00000377561 LINC01600Q96MT4 127 aa12.23□□□□□ -0.45
CNTNAP3B-203ENST00000377561 FAM104AQ969W3 186 aa12.22□□□□□ -0.45
CNTNAP3B-203ENST00000377561 KLKP1Q107X0 134 aa12.22□□□□□ -0.45
CNTNAP3B-203ENST00000377561 H7BZZ5 65 aa12.19□□□□□ -0.46
CNTNAP3B-203ENST00000377561 ITPR3Q14573 2671 aa12.18□□□□□ -0.46
CNTNAP3B-203ENST00000377561 A8MUN3 132 aa12.17□□□□□ -0.46
CNTNAP3B-203ENST00000377561 COX6B2Q6YFQ2 88 aa12.17□□□□□ -0.46
CNTNAP3B-203ENST00000377561 COA5Q86WW8 74 aa12.16□□□□□ -0.46
CNTNAP3B-203ENST00000377561 USP24Q9UPU5 2620 aa12.16□□□□□ -0.46
CNTNAP3B-203ENST00000377561 SSBP3-AS1Q7Z2R9 100 aa12.15□□□□□ -0.46
CNTNAP3B-203ENST00000377561 DSCR10P59022 87 aa12.15□□□□□ -0.46
CNTNAP3B-203ENST00000377561 BRCA2P51587 3418 aa12.14□□□□□ -0.47
CNTNAP3B-203ENST00000377561 C9orf163Q8N9P6 203 aa12.14□□□□□ -0.47
CNTNAP3B-203ENST00000377561 LINC00304Q8N9R0 145 aa12.14□□□□□ -0.47
CNTNAP3B-203ENST00000377561 C8orf17Q9NRJ1 99 aa12.14□□□□□ -0.47
CNTNAP3B-203ENST00000377561 ZNF861PO60384 105 aa12.14□□□□□ -0.47
CNTNAP3B-203ENST00000377561 UQCR11O14957 56 aa12.13□□□□□ -0.47
CNTNAP3B-203ENST00000377561 OBSCN-AS1Q96MR7 158 aa12.13□□□□□ -0.47
CNTNAP3B-203ENST00000377561 CFAP54Q96N23 3096 aa12.13□□□□□ -0.47
CNTNAP3B-203ENST00000377561 ZNF292O60281 2723 aa12.12□□□□□ -0.47
CNTNAP3B-203ENST00000377561 PRR15Q8IV56 129 aa12.12□□□□□ -0.47
CNTNAP3B-203ENST00000377561 CASC10Q5T4H9 136 aa12.11□□□□□ -0.47
CNTNAP3B-203ENST00000377561 LAMA2P24043 3122 aaKnown RBP12.1□□□□□ -0.47
CNTNAP3B-203ENST00000377561 MGAQ8IWI9 3026 aa12.1□□□□□ -0.47
CNTNAP3B-203ENST00000377561 CYP4F30PQ9H0H9 118 aa12.1□□□□□ -0.47
CNTNAP3B-203ENST00000377561 MGAM2Q2M2H8 2515 aa12.09□□□□□ -0.47
CNTNAP3B-203ENST00000377561 A0A1B0GVX0 72 aa12.08□□□□□ -0.48
CNTNAP3B-203ENST00000377561 CENPEQ02224 2701 aa12.08□□□□□ -0.48
CNTNAP3B-203ENST00000377561 A0A087WTM6 91 aa12.08□□□□□ -0.48
CNTNAP3B-203ENST00000377561 CNBPP62633 177 aaKnown RBP12.08□□□□□ -0.48
CNTNAP3B-203ENST00000377561 A0A1W2PNN7 141 aa12.07□□□□□ -0.48
CNTNAP3B-203ENST00000377561 APLNQ9ULZ1 77 aa12.07□□□□□ -0.48
CNTNAP3B-203ENST00000377561 CRIPTQ9P021 101 aa12.06□□□□□ -0.48
CNTNAP3B-203ENST00000377561 A0A0G2JQZ4 141 aa12.06□□□□□ -0.48
CNTNAP3B-203ENST00000377561 IGLV5-37A0A075B6J1 123 aa12.05□□□□□ -0.48
CNTNAP3B-203ENST00000377561 A0A1W2PNM2 257 aa12.05□□□□□ -0.48
CNTNAP3B-203ENST00000377561 C9orf92A6NGG3 77 aa12.05□□□□□ -0.48
CNTNAP3B-203ENST00000377561 ATRQ13535 2644 aa12.05□□□□□ -0.48
CNTNAP3B-203ENST00000377561 HELZ2Q9BYK8 2649 aaKnown RBP12.03□□□□□ -0.48
CNTNAP3B-203ENST00000377561 IGLV5-48A0A075B6I7 105 aa12.02□□□□□ -0.49
CNTNAP3B-203ENST00000377561 CFAP46Q8IYW2 2715 aa12.02□□□□□ -0.49
CNTNAP3B-203ENST00000377561 SMR3BP02814 79 aaPredicted RBP12.01□□□□□ -0.49
CNTNAP3B-203ENST00000377561 CR1P17927 2039 aa11.99□□□□□ -0.49
CNTNAP3B-203ENST00000377561 MIR22HGQ0VDD5 57 aa11.99□□□□□ -0.49
CNTNAP3B-203ENST00000377561 WIPF1O43516 503 aa11.98□□□□□ -0.49
CNTNAP3B-203ENST00000377561 ANAPC11Q9NYG5 84 aa11.97□□□□□ -0.49
CNTNAP3B-203ENST00000377561 IGLV7-43P04211 117 aa11.97□□□□□ -0.49
CNTNAP3B-203ENST00000377561 PRUNE2Q8WUY3 3088 aa11.97□□□□□ -0.49
CNTNAP3B-203ENST00000377561 UNC80Q8N2C7 3258 aa11.96□□□□□ -0.49
CNTNAP3B-203ENST00000377561 CD164Q04900 197 aa11.96□□□□□ -0.49
CNTNAP3B-203ENST00000377561 SPRR4Q96PI1 79 aa11.94□□□□□ -0.5
CNTNAP3B-203ENST00000377561 PSORS1C2Q9UIG4 136 aa11.93□□□□□ -0.5
CNTNAP3B-203ENST00000377561 WDFY4Q6ZS81 3184 aa11.93□□□□□ -0.5
CNTNAP3B-203ENST00000377561 RBM12B-AS1Q9P1G2 102 aa11.89□□□□□ -0.51
CNTNAP3B-203ENST00000377561 MAST4O15021 2626 aa11.88□□□□□ -0.51
CNTNAP3B-203ENST00000377561 AKAP13Q12802 2813 aa11.87□□□□□ -0.51
CNTNAP3B-203ENST00000377561 KTN1-AS1Q86SY8 53 aa11.83□□□□□ -0.51
CNTNAP3B-203ENST00000377561 Q8NDZ9 215 aa11.82□□□□□ -0.52
CNTNAP3B-203ENST00000377561 CYSTM1Q9H1C7 97 aa11.82□□□□□ -0.52
CNTNAP3B-203ENST00000377561 TRIOO75962 3097 aa11.81□□□□□ -0.52
CNTNAP3B-203ENST00000377561 OCR1Q9BZK8 76 aa11.81□□□□□ -0.52
CNTNAP3B-203ENST00000377561 LINC01554Q52M75 96 aa11.8□□□□□ -0.52
CNTNAP3B-203ENST00000377561 Q5XG85 94 aa11.8□□□□□ -0.52
CNTNAP3B-203ENST00000377561 CDH23Q9H251 3354 aa11.79□□□□□ -0.52
CNTNAP3B-203ENST00000377561 SPANXA2-OT1Q8N9U9 137 aa11.78□□□□□ -0.52
CNTNAP3B-203ENST00000377561 XIRP2A4UGR9 3374 aa11.78□□□□□ -0.52
CNTNAP3B-203ENST00000377561 LCA10Q71F78 164 aa11.77□□□□□ -0.52
CNTNAP3B-203ENST00000377561 Q8N1X5 172 aa11.77□□□□□ -0.53
CNTNAP3B-203ENST00000377561 CDC42SE1Q9NRR8 79 aa11.76□□□□□ -0.53
CNTNAP3B-203ENST00000377561 VPS13AQ96RL7 3174 aa11.76□□□□□ -0.53
CNTNAP3B-203ENST00000377561 A0A0D9SG42 100 aa11.74□□□□□ -0.53
CNTNAP3B-203ENST00000377561 CHD6Q8TD26 2715 aa11.73□□□□□ -0.53
CNTNAP3B-203ENST00000377561 SPRR1AP35321 89 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms