RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 ATP5EP2Q5VTU8 51 aa8.51□□□□□ -1.05
USP11-204ENST00000377107 C7orf33Q8WU49 177 aa8.51□□□□□ -1.05
USP11-204ENST00000377107 NREPQ16612 68 aa8.5□□□□□ -1.05
USP11-204ENST00000377107 CRYGAP11844 174 aa8.5□□□□□ -1.05
USP11-204ENST00000377107 LINC01556Q5JQF7 62 aa8.49□□□□□ -1.05
USP11-204ENST00000377107 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.48□□□□□ -1.05
USP11-204ENST00000377107 J3KT08 172 aa8.47□□□□□ -1.05
USP11-204ENST00000377107 PSCAO43653 123 aa8.47□□□□□ -1.05
USP11-204ENST00000377107 KRTAP26-1Q6PEX3 210 aa8.47□□□□□ -1.05
USP11-204ENST00000377107 LINC00588Q9Y4M8 146 aa8.47□□□□□ -1.05
USP11-204ENST00000377107 LOC110117498A0A087WWA1 95 aa8.47□□□□□ -1.05
USP11-204ENST00000377107 PDE6GP18545 87 aa8.47□□□□□ -1.05
USP11-204ENST00000377107 TENM2Q9NT68 2774 aa8.46□□□□□ -1.05
USP11-204ENST00000377107 LINC00528Q8N1L1 170 aa8.46□□□□□ -1.05
USP11-204ENST00000377107 ST20-AS1Q8NBB2 130 aa8.46□□□□□ -1.05
USP11-204ENST00000377107 BPY2O14599 106 aa8.45□□□□□ -1.06
USP11-204ENST00000377107 DPH3Q96FX2 82 aa8.45□□□□□ -1.06
USP11-204ENST00000377107 A0A0G2JQZ4 141 aa8.45□□□□□ -1.06
USP11-204ENST00000377107 A0A1W2PNN7 141 aa8.45□□□□□ -1.06
USP11-204ENST00000377107 RMI2Q96E14 147 aa8.45□□□□□ -1.06
USP11-204ENST00000377107 H3BNG1 76 aa8.44□□□□□ -1.06
USP11-204ENST00000377107 UBE2DNLQ8IWF7 75 aa8.44□□□□□ -1.06
USP11-204ENST00000377107 TM2D3Q9BRN9 247 aa8.43□□□□□ -1.06
USP11-204ENST00000377107 TRBV7-4A0A0J9YYF1 115 aa8.42□□□□□ -1.06
USP11-204ENST00000377107 WIPF1O43516 503 aa8.42□□□□□ -1.06
USP11-204ENST00000377107 HIGD2AQ9BW72 106 aa8.42□□□□□ -1.06
USP11-204ENST00000377107 TMEM258P61165 79 aa8.41□□□□□ -1.06
USP11-204ENST00000377107 FUSP35637 526 aaKnown RBP eCLIP8.41□□□□□ -1.06
USP11-204ENST00000377107 DEFB116Q30KQ4 102 aa8.4□□□□□ -1.06
USP11-204ENST00000377107 Q8N377 158 aa8.4□□□□□ -1.06
USP11-204ENST00000377107 A0A096LNI7 61 aa8.4□□□□□ -1.07
USP11-204ENST00000377107 H3BQ85 93 aa8.4□□□□□ -1.07
USP11-204ENST00000377107 DNAH10OSP0CZ25 163 aa8.39□□□□□ -1.07
USP11-204ENST00000377107 TRAV7A0A075B6U4 112 aa8.38□□□□□ -1.07
USP11-204ENST00000377107 PRLHP81277 87 aa8.38□□□□□ -1.07
USP11-204ENST00000377107 F8WEM9 126 aa8.38□□□□□ -1.07
USP11-204ENST00000377107 ERC2-IT1O76042 136 aa8.38□□□□□ -1.07
USP11-204ENST00000377107 C1orf137Q5JT78 98 aa8.38□□□□□ -1.07
USP11-204ENST00000377107 MRPL55Q7Z7F7 128 aaKnown RBP8.37□□□□□ -1.07
USP11-204ENST00000377107 CSMD3Q7Z407 3707 aa8.37□□□□□ -1.07
USP11-204ENST00000377107 FAM236DA0A1B0GTK5 79 aa8.37□□□□□ -1.07
USP11-204ENST00000377107 FAM236CP0DP71 79 aa8.37□□□□□ -1.07
USP11-204ENST00000377107 CXCL6P80162 114 aa8.36□□□□□ -1.07
USP11-204ENST00000377107 KCNQ1DNQ9H478 68 aa8.36□□□□□ -1.07
USP11-204ENST00000377107 Q9BRP9 147 aa8.36□□□□□ -1.07
USP11-204ENST00000377107 TRBV7-6A0A0J9YX20 115 aa8.36□□□□□ -1.07
USP11-204ENST00000377107 Q6ZRX8 168 aa8.36□□□□□ -1.07
USP11-204ENST00000377107 FAM30AQ9NZY2 134 aa8.35□□□□□ -1.07
USP11-204ENST00000377107 K7EIL1 84 aa8.35□□□□□ -1.07
USP11-204ENST00000377107 DHRS4-AS1Q9P1J3 65 aa8.34□□□□□ -1.07
USP11-204ENST00000377107 CHTF8P0CG12 524 aa8.33□□□□□ -1.08
USP11-204ENST00000377107 ANK2Q01484 3957 aa8.33□□□□□ -1.08
USP11-204ENST00000377107 SRRM2Q9UQ35 2752 aaKnown RBP8.33□□□□□ -1.08
USP11-204ENST00000377107 IGLV1-50A0A075B6I6 118 aa8.33□□□□□ -1.08
USP11-204ENST00000377107 OXTP01178 125 aa8.32□□□□□ -1.08
USP11-204ENST00000377107 REG3GQ6UW15 175 aa8.31□□□□□ -1.08
USP11-204ENST00000377107 C4orf26Q17RF5 130 aa8.31□□□□□ -1.08
USP11-204ENST00000377107 HRCT1Q6UXD1 115 aa8.31□□□□□ -1.08
USP11-204ENST00000377107 A0A1W2PNM2 257 aa8.3□□□□□ -1.08
USP11-204ENST00000377107 H7BZZ5 65 aa8.29□□□□□ -1.08
USP11-204ENST00000377107 PRYO14603 147 aa8.29□□□□□ -1.08
USP11-204ENST00000377107 SMIM29Q86T20 159 aa8.29□□□□□ -1.08
USP11-204ENST00000377107 IGKV4-1P06312 121 aa8.28□□□□□ -1.08
USP11-204ENST00000377107 TMEM254Q8TBM7 123 aa8.28□□□□□ -1.08
USP11-204ENST00000377107 KRTAP7-1Q8IUC3 87 aa8.28□□□□□ -1.08
USP11-204ENST00000377107 KRTAP1-5Q9BYS1 174 aa8.28□□□□□ -1.08
USP11-204ENST00000377107 WFDC13Q8IUB5 93 aa8.27□□□□□ -1.09
USP11-204ENST00000377107 SVIPQ8NHG7 77 aa8.27□□□□□ -1.09
USP11-204ENST00000377107 PRR4Q16378 134 aa8.26□□□□□ -1.09
USP11-204ENST00000377107 PHF5AQ7RTV0 110 aaKnown RBP8.26□□□□□ -1.09
USP11-204ENST00000377107 A0A087WSZ3 146 aa8.25□□□□□ -1.09
USP11-204ENST00000377107 UBE2AP49459 152 aa8.25□□□□□ -1.09
USP11-204ENST00000377107 LINC00476Q8WZB0 136 aa8.25□□□□□ -1.09
USP11-204ENST00000377107 F8WDY8 70 aa8.24□□□□□ -1.09
USP11-204ENST00000377107 Q8NBF4 154 aa8.24□□□□□ -1.09
USP11-204ENST00000377107 LRCOL1A6NCL2 159 aa8.24□□□□□ -1.09
USP11-204ENST00000377107 TLX1NBP0CAT3 122 aa8.24□□□□□ -1.09
USP11-204ENST00000377107 RPS28P62857 69 aaKnown RBP8.23□□□□□ -1.09
USP11-204ENST00000377107 K7EQZ3 153 aa8.23□□□□□ -1.09
USP11-204ENST00000377107 IGLV5-48A0A075B6I7 105 aa8.22□□□□□ -1.09
USP11-204ENST00000377107 RPL37AP61513 92 aaKnown RBP8.22□□□□□ -1.09
USP11-204ENST00000377107 MPLKIPQ8TAP9 179 aa8.22□□□□□ -1.09
USP11-204ENST00000377107 KLKP1Q107X0 134 aa8.21□□□□□ -1.1
USP11-204ENST00000377107 KRTAP4-16G5E9R7 235 aaPredicted RBP8.2□□□□□ -1.1
USP11-204ENST00000377107 COL7A1Q02388 2944 aa8.19□□□□□ -1.1
USP11-204ENST00000377107 LINC00474Q9P2X8 69 aa8.19□□□□□ -1.1
USP11-204ENST00000377107 IGFL1Q6UW32 110 aa8.18□□□□□ -1.1
USP11-204ENST00000377107 SERP1Q9Y6X1 66 aa8.18□□□□□ -1.1
USP11-204ENST00000377107 PLA2G2DQ9UNK4 145 aa8.17□□□□□ -1.1
USP11-204ENST00000377107 C16orf90A8MZG2 172 aa8.17□□□□□ -1.1
USP11-204ENST00000377107 SPRR1AP35321 89 aa8.17□□□□□ -1.1
USP11-204ENST00000377107 EPM2AB3EWF7 344 aa8.16□□□□□ -1.1
USP11-204ENST00000377107 BCE1O60756 84 aa8.16□□□□□ -1.1
USP11-204ENST00000377107 IGLV9-49A0A0B4J1Y8 123 aa8.15□□□□□ -1.1
USP11-204ENST00000377107 OCR1Q9BZK8 76 aa8.15□□□□□ -1.1
USP11-204ENST00000377107 DSCR10P59022 87 aa8.15□□□□□ -1.1
USP11-204ENST00000377107 C5orf47Q569G3 176 aa8.15□□□□□ -1.11
USP11-204ENST00000377107 KRTAP11-1Q8IUC1 163 aa8.15□□□□□ -1.11
USP11-204ENST00000377107 IGLV5-37A0A075B6J1 123 aa8.14□□□□□ -1.11
USP11-204ENST00000377107 H0Y9J4 135 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms