RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 LINC01556Q5JQF7 62 aa7.03□□□□□ -1.28
ABCF1-202ENST00000376545 CXCL6P80162 114 aa7.03□□□□□ -1.28
ABCF1-202ENST00000376545 C20orf197Q8N268 126 aa7.02□□□□□ -1.29
ABCF1-202ENST00000376545 OXLD1Q5BKU9 147 aa7.01□□□□□ -1.29
ABCF1-202ENST00000376545 Q6ZRP5 223 aa7.01□□□□□ -1.29
ABCF1-202ENST00000376545 ATRQ13535 2644 aa7□□□□□ -1.29
ABCF1-202ENST00000376545 KCNQ1DNQ9H478 68 aa6.98□□□□□ -1.29
ABCF1-202ENST00000376545 TLX1NBP0CAT3 122 aa6.98□□□□□ -1.29
ABCF1-202ENST00000376545 DNAH10OSP0CZ25 163 aa6.98□□□□□ -1.29
ABCF1-202ENST00000376545 PLA2G2DQ9UNK4 145 aa6.98□□□□□ -1.29
ABCF1-202ENST00000376545 PKD1L1Q8TDX9 2849 aa6.98□□□□□ -1.29
ABCF1-202ENST00000376545 LINC00474Q9P2X8 69 aa6.97□□□□□ -1.29
ABCF1-202ENST00000376545 TRAV7A0A075B6U4 112 aa6.96□□□□□ -1.29
ABCF1-202ENST00000376545 SYCNQ0VAF6 134 aa6.96□□□□□ -1.29
ABCF1-202ENST00000376545 DEFB131BA0A096LNP1 70 aa6.96□□□□□ -1.3
ABCF1-202ENST00000376545 HAMPP81172 84 aa6.96□□□□□ -1.3
ABCF1-202ENST00000376545 IGKV2D-24A0A075B6R9 120 aa6.95□□□□□ -1.3
ABCF1-202ENST00000376545 MPLKIPQ8TAP9 179 aa6.95□□□□□ -1.3
ABCF1-202ENST00000376545 IGLV5-37A0A075B6J1 123 aa6.94□□□□□ -1.3
ABCF1-202ENST00000376545 C11orf45Q8TAV5 145 aa6.94□□□□□ -1.3
ABCF1-202ENST00000376545 TRAV10A0A0B4J240 114 aa6.94□□□□□ -1.3
ABCF1-202ENST00000376545 SERTAD4-AS1Q5TG53 156 aa6.94□□□□□ -1.3
ABCF1-202ENST00000376545 FP248Q71RG6 208 aaPredicted RBP6.94□□□□□ -1.3
ABCF1-202ENST00000376545 KRTAP4-16G5E9R7 235 aaPredicted RBP6.94□□□□□ -1.3
ABCF1-202ENST00000376545 C7orf33Q8WU49 177 aa6.93□□□□□ -1.3
ABCF1-202ENST00000376545 SNURFQ9Y675 71 aa6.93□□□□□ -1.3
ABCF1-202ENST00000376545 IGLV5-48A0A075B6I7 105 aa6.92□□□□□ -1.3
ABCF1-202ENST00000376545 KLKP1Q107X0 134 aa6.92□□□□□ -1.3
ABCF1-202ENST00000376545 TENM3Q9P273 2699 aa6.92□□□□□ -1.3
ABCF1-202ENST00000376545 Q8N377 158 aa6.92□□□□□ -1.3
ABCF1-202ENST00000376545 SPRR1AP35321 89 aa6.92□□□□□ -1.3
ABCF1-202ENST00000376545 KRTAP24-1Q3LI83 254 aa6.91□□□□□ -1.3
ABCF1-202ENST00000376545 SERP1Q9Y6X1 66 aa6.91□□□□□ -1.3
ABCF1-202ENST00000376545 NKAPP1Q8N9T2 125 aa6.9□□□□□ -1.3
ABCF1-202ENST00000376545 HUWE1Q7Z6Z7 4374 aaKnown RBP6.9□□□□□ -1.3
ABCF1-202ENST00000376545 H7BZZ5 65 aa6.9□□□□□ -1.3
ABCF1-202ENST00000376545 KRTAP7-1Q8IUC3 87 aa6.9□□□□□ -1.3
ABCF1-202ENST00000376545 IGLV1-50A0A075B6I6 118 aa6.9□□□□□ -1.31
ABCF1-202ENST00000376545 A0A1B0GW54 56 aa6.89□□□□□ -1.31
ABCF1-202ENST00000376545 PRYO14603 147 aa6.89□□□□□ -1.31
ABCF1-202ENST00000376545 Q6ZRX8 168 aa6.89□□□□□ -1.31
ABCF1-202ENST00000376545 LINC00588Q9Y4M8 146 aa6.89□□□□□ -1.31
ABCF1-202ENST00000376545 EPM2AB3EWF7 344 aa6.89□□□□□ -1.31
ABCF1-202ENST00000376545 DHRS4-AS1Q9P1J3 65 aa6.89□□□□□ -1.31
ABCF1-202ENST00000376545 SMIM26A0A096LP01 95 aa6.88□□□□□ -1.31
ABCF1-202ENST00000376545 TNP2Q05952 138 aa6.88□□□□□ -1.31
ABCF1-202ENST00000376545 Q9BRP9 147 aa6.88□□□□□ -1.31
ABCF1-202ENST00000376545 IGKV4-1P06312 121 aa6.88□□□□□ -1.31
ABCF1-202ENST00000376545 RMI2Q96E14 147 aa6.88□□□□□ -1.31
ABCF1-202ENST00000376545 SCXQ7RTU7 201 aa6.87□□□□□ -1.31
ABCF1-202ENST00000376545 FBN1P35555 2871 aaKnown RBP6.87□□□□□ -1.31
ABCF1-202ENST00000376545 F8WEM9 126 aa6.87□□□□□ -1.31
ABCF1-202ENST00000376545 CASC10Q5T4H9 136 aa6.87□□□□□ -1.31
ABCF1-202ENST00000376545 FAM168BA1KXE4 195 aa6.86□□□□□ -1.31
ABCF1-202ENST00000376545 ERC2-IT1O76042 136 aa6.86□□□□□ -1.31
ABCF1-202ENST00000376545 TM2D3Q9BRN9 247 aa6.86□□□□□ -1.31
ABCF1-202ENST00000376545 F8P00451 2351 aa6.86□□□□□ -1.31
ABCF1-202ENST00000376545 NREPQ16612 68 aa6.85□□□□□ -1.31
ABCF1-202ENST00000376545 BPY2O14599 106 aa6.84□□□□□ -1.31
ABCF1-202ENST00000376545 A0A1W2PNM2 257 aa6.83□□□□□ -1.32
ABCF1-202ENST00000376545 RPL37AP8A6NKH3 93 aa6.83□□□□□ -1.32
ABCF1-202ENST00000376545 DEFB105AQ8NG35 78 aa6.83□□□□□ -1.32
ABCF1-202ENST00000376545 PMAIP1Q13794 54 aa6.83□□□□□ -1.32
ABCF1-202ENST00000376545 SPRR4Q96PI1 79 aa6.83□□□□□ -1.32
ABCF1-202ENST00000376545 OCR1Q9BZK8 76 aa6.83□□□□□ -1.32
ABCF1-202ENST00000376545 NDUFC1O43677 76 aa6.82□□□□□ -1.32
ABCF1-202ENST00000376545 MRPL55Q7Z7F7 128 aaKnown RBP6.82□□□□□ -1.32
ABCF1-202ENST00000376545 C3orf84H3BNL1 204 aa6.81□□□□□ -1.32
ABCF1-202ENST00000376545 KRTAP21-3Q3LHN1 58 aa6.81□□□□□ -1.32
ABCF1-202ENST00000376545 FAM229BQ4G0N7 80 aa6.81□□□□□ -1.32
ABCF1-202ENST00000376545 Q8N9L7 120 aa6.81□□□□□ -1.32
ABCF1-202ENST00000376545 ETDCA0A1B0GVM5 59 aa6.81□□□□□ -1.32
ABCF1-202ENST00000376545 DNAH9Q9NYC9 4486 aa6.81□□□□□ -1.32
ABCF1-202ENST00000376545 ST20-AS1Q8NBB2 130 aa6.81□□□□□ -1.32
ABCF1-202ENST00000376545 MAST4O15021 2626 aa6.81□□□□□ -1.32
ABCF1-202ENST00000376545 DYNC2H1Q8NCM8 4307 aaKnown RBP6.8□□□□□ -1.32
ABCF1-202ENST00000376545 DNAH10Q8IVF4 4471 aa6.8□□□□□ -1.32
ABCF1-202ENST00000376545 Q8NBF4 154 aa6.8□□□□□ -1.32
ABCF1-202ENST00000376545 STAB1Q9NY15 2570 aa6.79□□□□□ -1.32
ABCF1-202ENST00000376545 FUSP35637 526 aaKnown RBP eCLIP6.79□□□□□ -1.32
ABCF1-202ENST00000376545 C1orf137Q5JT78 98 aa6.79□□□□□ -1.32
ABCF1-202ENST00000376545 LRCOL1A6NCL2 159 aa6.79□□□□□ -1.32
ABCF1-202ENST00000376545 SMIM29Q86T20 159 aa6.79□□□□□ -1.32
ABCF1-202ENST00000376545 TMEM254Q8TBM7 123 aa6.78□□□□□ -1.32
ABCF1-202ENST00000376545 REG3GQ6UW15 175 aa6.77□□□□□ -1.33
ABCF1-202ENST00000376545 NOTCH1P46531 2555 aa6.77□□□□□ -1.33
ABCF1-202ENST00000376545 LCE6AA0A183 80 aa6.76□□□□□ -1.33
ABCF1-202ENST00000376545 K7EIL1 84 aa6.76□□□□□ -1.33
ABCF1-202ENST00000376545 ATP5EP56381 51 aaPredicted RBP6.76□□□□□ -1.33
ABCF1-202ENST00000376545 LYSTQ99698 3801 aa6.76□□□□□ -1.33
ABCF1-202ENST00000376545 BAHCC1Q9P281 2608 aa6.76□□□□□ -1.33
ABCF1-202ENST00000376545 CNBPP62633 177 aaKnown RBP6.76□□□□□ -1.33
ABCF1-202ENST00000376545 DSCR10P59022 87 aa6.75□□□□□ -1.33
ABCF1-202ENST00000376545 IGLV8-61A0A075B6I0 122 aa6.74□□□□□ -1.33
ABCF1-202ENST00000376545 C16orf90A8MZG2 172 aa6.74□□□□□ -1.33
ABCF1-202ENST00000376545 UBE2BP63146 152 aa6.74□□□□□ -1.33
ABCF1-202ENST00000376545 KRTAP1-5Q9BYS1 174 aa6.73□□□□□ -1.33
ABCF1-202ENST00000376545 NBEAL1Q6ZS30 2694 aa6.73□□□□□ -1.33
ABCF1-202ENST00000376545 PRB2P02812 416 aaPredicted RBP6.73□□□□□ -1.33
ABCF1-202ENST00000376545 A0A096LNI7 61 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms