RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 MUC2Q02817 5179 aa9.01□□□□□ -0.97
SDHB-201ENST00000375499 PPDPFQ9H3Y8 114 aa9□□□□□ -0.97
SDHB-201ENST00000375499 ZNF815PA8K554 130 aa8.99□□□□□ -0.97
SDHB-201ENST00000375499 LCE2AQ5TA79 106 aaPredicted RBP8.98□□□□□ -0.97
SDHB-201ENST00000375499 LINC00308Q8TCZ7 52 aa8.98□□□□□ -0.97
SDHB-201ENST00000375499 ZNF706Q9Y5V0 76 aaPredicted RBP8.98□□□□□ -0.97
SDHB-201ENST00000375499 ANKRD39Q53RE8 183 aa8.97□□□□□ -0.97
SDHB-201ENST00000375499 S100A7L2Q5SY68 101 aa8.97□□□□□ -0.97
SDHB-201ENST00000375499 Q6ZRX8 168 aa8.97□□□□□ -0.97
SDHB-201ENST00000375499 FAT4Q6V0I7 4981 aa8.97□□□□□ -0.97
SDHB-201ENST00000375499 TRAV23DV6A0A075B6W5 121 aa8.96□□□□□ -0.98
SDHB-201ENST00000375499 TIMM17BO60830 172 aa8.96□□□□□ -0.98
SDHB-201ENST00000375499 LINC00483Q53H64 154 aa8.96□□□□□ -0.98
SDHB-201ENST00000375499 ATOH7Q8N100 152 aa8.96□□□□□ -0.98
SDHB-201ENST00000375499 S100A12P80511 92 aa8.95□□□□□ -0.98
SDHB-201ENST00000375499 GAGE2AQ6NT46 116 aa8.95□□□□□ -0.98
SDHB-201ENST00000375499 SPANXCQ9NY87 97 aa8.94□□□□□ -0.98
SDHB-201ENST00000375499 ZNF73O43830 326 aaPredicted RBP8.93□□□□□ -0.98
SDHB-201ENST00000375499 Q8NBF4 154 aa8.93□□□□□ -0.98
SDHB-201ENST00000375499 S100A1P23297 94 aa8.91□□□□□ -0.98
SDHB-201ENST00000375499 MUC17Q685J3 4493 aa8.9□□□□□ -0.98
SDHB-201ENST00000375499 C20orf202A1L168 122 aa8.9□□□□□ -0.98
SDHB-201ENST00000375499 PCP2Q8IVA1 136 aa8.9□□□□□ -0.98
SDHB-201ENST00000375499 HIST3H2BBQ8N257 126 aa8.9□□□□□ -0.98
SDHB-201ENST00000375499 ST20-AS1Q8NBB2 130 aa8.9□□□□□ -0.98
SDHB-201ENST00000375499 IGLV9-49A0A0B4J1Y8 123 aa8.89□□□□□ -0.99
SDHB-201ENST00000375499 MOBPQ13875 183 aa8.89□□□□□ -0.99
SDHB-201ENST00000375499 OR13C6PQ8NH95 151 aa8.89□□□□□ -0.99
SDHB-201ENST00000375499 SPANXDQ9BXN6 97 aa8.89□□□□□ -0.99
SDHB-201ENST00000375499 CTAG1AP78358 180 aa8.88□□□□□ -0.99
SDHB-201ENST00000375499 SPAG11AQ6PDA7 123 aa8.87□□□□□ -0.99
SDHB-201ENST00000375499 SCGB1D4Q6XE38 83 aa8.87□□□□□ -0.99
SDHB-201ENST00000375499 HIST1H2BLQ99880 126 aa8.87□□□□□ -0.99
SDHB-201ENST00000375499 IGLV7-46A0A075B6I9 117 aa8.86□□□□□ -0.99
SDHB-201ENST00000375499 JOSD1Q15040 202 aaPredicted RBP8.86□□□□□ -0.99
SDHB-201ENST00000375499 TPRXLQ17RH7 258 aa8.85□□□□□ -0.99
SDHB-201ENST00000375499 C6orf99Q4VX62 202 aa8.83□□□□□ -1
SDHB-201ENST00000375499 C4orf48Q5BLP8 95 aa8.83□□□□□ -1
SDHB-201ENST00000375499 ELOF1P60002 83 aaKnown RBP8.82□□□□□ -1
SDHB-201ENST00000375499 MUSTN1Q8IVN3 82 aa8.82□□□□□ -1
SDHB-201ENST00000375499 LINC00518Q8N0U6 118 aa8.82□□□□□ -1
SDHB-201ENST00000375499 SPINK1P00995 79 aa8.81□□□□□ -1
SDHB-201ENST00000375499 S100A2P29034 98 aa8.81□□□□□ -1
SDHB-201ENST00000375499 CBY1Q9Y3M2 126 aa8.81□□□□□ -1
SDHB-201ENST00000375499 IFITM1P13164 125 aa8.8□□□□□ -1
SDHB-201ENST00000375499 HINT1P49773 126 aaPredicted RBP8.8□□□□□ -1
SDHB-201ENST00000375499 C9orf153Q5TBE3 101 aa8.8□□□□□ -1
SDHB-201ENST00000375499 SSBP3-AS1Q7Z2R9 100 aa8.8□□□□□ -1
SDHB-201ENST00000375499 COX7BP24311 80 aa8.79□□□□□ -1
SDHB-201ENST00000375499 SPRR1BP22528 89 aa8.78□□□□□ -1
SDHB-201ENST00000375499 Q8N377 158 aa8.78□□□□□ -1
SDHB-201ENST00000375499 CDIP1Q9H305 208 aa8.78□□□□□ -1
SDHB-201ENST00000375499 DHRS4-AS1Q9P1J3 65 aa8.78□□□□□ -1
SDHB-201ENST00000375499 C5orf52A6NGY3 159 aa8.77□□□□□ -1.01
SDHB-201ENST00000375499 AKR1D1P51857 326 aa8.77□□□□□ -1.01
SDHB-201ENST00000375499 Q6ZVH6 145 aa8.77□□□□□ -1.01
SDHB-201ENST00000375499 FP248Q71RG6 208 aaPredicted RBP8.77□□□□□ -1.01
SDHB-201ENST00000375499 SNRPEP62304 92 aaKnown RBP8.76□□□□□ -1.01
SDHB-201ENST00000375499 A6NDN8 102 aa8.75□□□□□ -1.01
SDHB-201ENST00000375499 S100A6P06703 90 aa8.75□□□□□ -1.01
SDHB-201ENST00000375499 RPS29P62273 56 aaKnown RBP8.75□□□□□ -1.01
SDHB-201ENST00000375499 KRTAP13-3Q3SY46 172 aa8.75□□□□□ -1.01
SDHB-201ENST00000375499 COPS9Q8WXC6 57 aa8.74□□□□□ -1.01
SDHB-201ENST00000375499 TRBV7-6A0A0J9YX20 115 aa8.73□□□□□ -1.01
SDHB-201ENST00000375499 A0A1B0GWB2 263 aa8.72□□□□□ -1.01
SDHB-201ENST00000375499 HSBP1L1C9JCN9 74 aa8.72□□□□□ -1.01
SDHB-201ENST00000375499 LINC01547P58512 204 aaPredicted RBP8.72□□□□□ -1.01
SDHB-201ENST00000375499 SMIM11BQ8TCY0 68 aa8.72□□□□□ -1.01
SDHB-201ENST00000375499 Q1RN00 199 aa8.71□□□□□ -1.02
SDHB-201ENST00000375499 DEFB105AQ8NG35 78 aa8.71□□□□□ -1.02
SDHB-201ENST00000375499 TRAV13-2A0A0B4J235 113 aa8.7□□□□□ -1.02
SDHB-201ENST00000375499 SMIM29Q86T20 159 aa8.7□□□□□ -1.02
SDHB-201ENST00000375499 A4D1N5 150 aa8.69□□□□□ -1.02
SDHB-201ENST00000375499 SCGB1D1O95968 90 aa8.69□□□□□ -1.02
SDHB-201ENST00000375499 TAL2Q16559 108 aa8.69□□□□□ -1.02
SDHB-201ENST00000375499 HRCT1Q6UXD1 115 aa8.69□□□□□ -1.02
SDHB-201ENST00000375499 LAMTOR3Q9UHA4 124 aa8.69□□□□□ -1.02
SDHB-201ENST00000375499 IGLV5-48A0A075B6I7 105 aa8.68□□□□□ -1.02
SDHB-201ENST00000375499 SLC25A20O43772 301 aa8.68□□□□□ -1.02
SDHB-201ENST00000375499 SLC25A34Q6PIV7 304 aa8.68□□□□□ -1.02
SDHB-201ENST00000375499 TEX49A0A1B0GTD5 131 aa8.67□□□□□ -1.02
SDHB-201ENST00000375499 A0A0G2JQZ4 141 aa8.66□□□□□ -1.02
SDHB-201ENST00000375499 COX8AP10176 69 aa8.65□□□□□ -1.02
SDHB-201ENST00000375499 C12orf57Q99622 126 aa8.65□□□□□ -1.02
SDHB-201ENST00000375499 CRCT1Q9UGL9 99 aa8.62□□□□□ -1.03
SDHB-201ENST00000375499 LINC00575Q6W349 94 aa8.61□□□□□ -1.03
SDHB-201ENST00000375499 KRTAP4-1Q9BYQ7 146 aa8.61□□□□□ -1.03
SDHB-201ENST00000375499 H7C2G1 150 aa8.6□□□□□ -1.03
SDHB-201ENST00000375499 LCE2BO14633 110 aa8.6□□□□□ -1.03
SDHB-201ENST00000375499 ASB16-AS1Q495Z4 193 aa8.6□□□□□ -1.03
SDHB-201ENST00000375499 C14orf144Q96I85 54 aa8.6□□□□□ -1.03
SDHB-201ENST00000375499 HIST1H4GQ99525 98 aa8.6□□□□□ -1.03
SDHB-201ENST00000375499 LIMD2Q9BT23 127 aa8.6□□□□□ -1.03
SDHB-201ENST00000375499 PRO1933Q9H354 126 aa8.6□□□□□ -1.03
SDHB-201ENST00000375499 PAM16Q9Y3D7 125 aa8.6□□□□□ -1.03
SDHB-201ENST00000375499 FSIP2Q5CZC0 6907 aa8.59□□□□□ -1.03
SDHB-201ENST00000375499 DLEU1O43261 78 aa8.59□□□□□ -1.03
SDHB-201ENST00000375499 XP32Q5T750 250 aa8.59□□□□□ -1.03
SDHB-201ENST00000375499 NHP2Q9NX24 153 aaKnown RBP8.59□□□□□ -1.03
SDHB-201ENST00000375499 CD164Q04900 197 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms