RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 M0R2N4 97 aa7.99□□□□□ -1.13
USF1-203ENST00000368021 GHRHP01286 108 aa7.99□□□□□ -1.13
USF1-203ENST00000368021 COX17Q14061 63 aa7.99□□□□□ -1.13
USF1-203ENST00000368021 GVQW2A0A096LPI5 108 aaPredicted RBP7.98□□□□□ -1.13
USF1-203ENST00000368021 JMJD7-PLA2G4BH0Y9G9 81 aa7.98□□□□□ -1.13
USF1-203ENST00000368021 ZNF561-AS1K7EIQ3 104 aa7.98□□□□□ -1.13
USF1-203ENST00000368021 EPPK1P58107 5090 aaKnown RBP7.97□□□□□ -1.13
USF1-203ENST00000368021 NBDYA0A0U1RRE5 68 aa7.96□□□□□ -1.13
USF1-203ENST00000368021 RPL28P46779 137 aaKnown RBP7.96□□□□□ -1.13
USF1-203ENST00000368021 C6orf223Q8N319 242 aa7.96□□□□□ -1.13
USF1-203ENST00000368021 LINC00308Q8TCZ7 52 aa7.96□□□□□ -1.13
USF1-203ENST00000368021 A0A0U1RRA0 63 aa7.96□□□□□ -1.14
USF1-203ENST00000368021 LINC00158P58513 81 aa7.96□□□□□ -1.14
USF1-203ENST00000368021 MIR7-3HGQ8N6C7 128 aa7.96□□□□□ -1.14
USF1-203ENST00000368021 UNQ6190/PRO20217Q6UXQ8 127 aa7.95□□□□□ -1.14
USF1-203ENST00000368021 DNAH6Q9C0G6 4158 aa7.95□□□□□ -1.14
USF1-203ENST00000368021 TRBV7-6A0A0J9YX20 115 aa7.94□□□□□ -1.14
USF1-203ENST00000368021 H7BZZ5 65 aa7.94□□□□□ -1.14
USF1-203ENST00000368021 CD164Q04900 197 aa7.94□□□□□ -1.14
USF1-203ENST00000368021 HIGD2BQ4VC39 106 aa7.94□□□□□ -1.14
USF1-203ENST00000368021 C10orf25Q5T742 122 aa7.94□□□□□ -1.14
USF1-203ENST00000368021 PRR15Q8IV56 129 aa7.94□□□□□ -1.14
USF1-203ENST00000368021 CYSTM1Q9H1C7 97 aa7.94□□□□□ -1.14
USF1-203ENST00000368021 ERC2-IT1O76042 136 aa7.94□□□□□ -1.14
USF1-203ENST00000368021 CAMK2N2Q96S95 79 aa7.94□□□□□ -1.14
USF1-203ENST00000368021 DNAH10Q8IVF4 4471 aa7.93□□□□□ -1.14
USF1-203ENST00000368021 PMAIP1Q13794 54 aa7.93□□□□□ -1.14
USF1-203ENST00000368021 SOSTDC1Q6X4U4 206 aa7.93□□□□□ -1.14
USF1-203ENST00000368021 BRK1Q8WUW1 75 aa7.93□□□□□ -1.14
USF1-203ENST00000368021 CCKP06307 115 aa7.92□□□□□ -1.14
USF1-203ENST00000368021 UBL5Q9BZL1 73 aa7.92□□□□□ -1.14
USF1-203ENST00000368021 C6orf48Q9UBA6 75 aa7.92□□□□□ -1.14
USF1-203ENST00000368021 H3BQ85 93 aa7.92□□□□□ -1.14
USF1-203ENST00000368021 C9orf116Q5BN46 136 aaPredicted RBP7.92□□□□□ -1.14
USF1-203ENST00000368021 Q6ZRU5 148 aa7.92□□□□□ -1.14
USF1-203ENST00000368021 C20orf197Q8N268 126 aa7.92□□□□□ -1.14
USF1-203ENST00000368021 IGKV3D-7A0A0C4DH55 119 aa7.9□□□□□ -1.14
USF1-203ENST00000368021 PSCAO43653 123 aa7.9□□□□□ -1.14
USF1-203ENST00000368021 SYCNQ0VAF6 134 aa7.9□□□□□ -1.14
USF1-203ENST00000368021 LINC00846Q9NV44 126 aa7.89□□□□□ -1.15
USF1-203ENST00000368021 RBM3P98179 157 aaKnown RBP7.89□□□□□ -1.15
USF1-203ENST00000368021 SND1-IT1Q9HBX3 110 aa7.89□□□□□ -1.15
USF1-203ENST00000368021 FAT2Q9NYQ8 4349 aa7.88□□□□□ -1.15
USF1-203ENST00000368021 Q6ZR54 194 aa7.88□□□□□ -1.15
USF1-203ENST00000368021 Q6ZRN7 208 aaPredicted RBP7.88□□□□□ -1.15
USF1-203ENST00000368021 FP248Q71RG6 208 aaPredicted RBP7.88□□□□□ -1.15
USF1-203ENST00000368021 C14orf177Q52M58 125 aa7.87□□□□□ -1.15
USF1-203ENST00000368021 C22orf24Q9Y442 160 aa7.87□□□□□ -1.15
USF1-203ENST00000368021 LECT2O14960 151 aa7.87□□□□□ -1.15
USF1-203ENST00000368021 SLPIP03973 132 aa7.86□□□□□ -1.15
USF1-203ENST00000368021 ORMDL1Q9P0S3 153 aa7.86□□□□□ -1.15
USF1-203ENST00000368021 TLX1NBP0CAT3 122 aa7.85□□□□□ -1.15
USF1-203ENST00000368021 PDE6GP18545 87 aa7.85□□□□□ -1.15
USF1-203ENST00000368021 DNAH17Q9UFH2 4485 aa7.85□□□□□ -1.15
USF1-203ENST00000368021 IGKV2-28A0A075B6P5 120 aa7.85□□□□□ -1.15
USF1-203ENST00000368021 IGKV2D-28P01615 120 aa7.85□□□□□ -1.15
USF1-203ENST00000368021 CNBPP62633 177 aaKnown RBP7.85□□□□□ -1.15
USF1-203ENST00000368021 FAM19A1Q7Z5A9 133 aa7.85□□□□□ -1.15
USF1-203ENST00000368021 A0A0U1RQV1 116 aa7.84□□□□□ -1.15
USF1-203ENST00000368021 LRCOL1A6NCL2 159 aa7.84□□□□□ -1.15
USF1-203ENST00000368021 C1orf134Q5TEV5 83 aa7.84□□□□□ -1.15
USF1-203ENST00000368021 A0A087WVE0 104 aa7.83□□□□□ -1.16
USF1-203ENST00000368021 TMEM256-PLSCR3K7ERE1 68 aa7.83□□□□□ -1.16
USF1-203ENST00000368021 RTL8CO15255 209 aa7.83□□□□□ -1.16
USF1-203ENST00000368021 CXCL6P80162 114 aa7.83□□□□□ -1.16
USF1-203ENST00000368021 C14orf132Q9NPU4 83 aa7.83□□□□□ -1.16
USF1-203ENST00000368021 PKHD1P08F94 4074 aa7.83□□□□□ -1.16
USF1-203ENST00000368021 Q6ZRP5 223 aa7.82□□□□□ -1.16
USF1-203ENST00000368021 LINC00337Q8N6G1 96 aa7.82□□□□□ -1.16
USF1-203ENST00000368021 HECTD4Q9Y4D8 3996 aa7.82□□□□□ -1.16
USF1-203ENST00000368021 TRAV23DV6A0A075B6W5 121 aa7.81□□□□□ -1.16
USF1-203ENST00000368021 F8WEM9 126 aa7.8□□□□□ -1.16
USF1-203ENST00000368021 LINC00167Q96N53 147 aa7.8□□□□□ -1.16
USF1-203ENST00000368021 XAGE1AQ9HD64 81 aa7.8□□□□□ -1.16
USF1-203ENST00000368021 PKD1P98161 4303 aa7.8□□□□□ -1.16
USF1-203ENST00000368021 MRPL55Q7Z7F7 128 aaKnown RBP7.79□□□□□ -1.16
USF1-203ENST00000368021 Q8NDZ9 215 aa7.79□□□□□ -1.16
USF1-203ENST00000368021 BIRC6Q9NR09 4857 aa7.79□□□□□ -1.16
USF1-203ENST00000368021 DNAH11Q96DT5 4516 aa7.78□□□□□ -1.16
USF1-203ENST00000368021 TNP2Q05952 138 aa7.78□□□□□ -1.16
USF1-203ENST00000368021 Q8N814 137 aa7.78□□□□□ -1.16
USF1-203ENST00000368021 FAM218AQ96MZ4 157 aa7.78□□□□□ -1.16
USF1-203ENST00000368021 A0A087WTM6 91 aa7.77□□□□□ -1.17
USF1-203ENST00000368021 VPREB1P12018 145 aa7.77□□□□□ -1.17
USF1-203ENST00000368021 PRR3P79522 188 aaKnown RBP7.77□□□□□ -1.17
USF1-203ENST00000368021 C9orf129Q5T035 196 aaKnown RBP7.77□□□□□ -1.17
USF1-203ENST00000368021 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.76□□□□□ -1.17
USF1-203ENST00000368021 PLA2G2DQ9UNK4 145 aa7.76□□□□□ -1.17
USF1-203ENST00000368021 LOC110117498A0A087WWA1 95 aa7.75□□□□□ -1.17
USF1-203ENST00000368021 Q1T7F1 81 aa7.75□□□□□ -1.17
USF1-203ENST00000368021 C9orf163Q8N9P6 203 aa7.75□□□□□ -1.17
USF1-203ENST00000368021 NCR3O14931 201 aa7.75□□□□□ -1.17
USF1-203ENST00000368021 C16orf90A8MZG2 172 aa7.74□□□□□ -1.17
USF1-203ENST00000368021 IGLV6-57P01721 117 aa7.74□□□□□ -1.17
USF1-203ENST00000368021 SMIM11BQ8TCY0 68 aa7.74□□□□□ -1.17
USF1-203ENST00000368021 TRBV7-4A0A0J9YYF1 115 aa7.73□□□□□ -1.17
USF1-203ENST00000368021 M0R378 163 aa7.73□□□□□ -1.17
USF1-203ENST00000368021 IGLV5-37A0A075B6J1 123 aa7.72□□□□□ -1.17
USF1-203ENST00000368021 A0A1B0GVY2 172 aa7.72□□□□□ -1.17
USF1-203ENST00000368021 A0A096LNI7 61 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms