RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 PKIGQ9Y2B9 76 aa9.57□□□□□ -0.88
NEK2-201ENST00000366998 C3orf84H3BNL1 204 aa9.56□□□□□ -0.88
NEK2-201ENST00000366998 IGLV1-50A0A075B6I6 118 aa9.55□□□□□ -0.88
NEK2-201ENST00000366998 CHTF8P0CG12 524 aa9.55□□□□□ -0.88
NEK2-201ENST00000366998 PRYO14603 147 aa9.55□□□□□ -0.88
NEK2-201ENST00000366998 ALMS1Q8TCU4 4167 aa9.55□□□□□ -0.88
NEK2-201ENST00000366998 DNAH6Q9C0G6 4158 aa9.55□□□□□ -0.88
NEK2-201ENST00000366998 A0A1W2PNN7 141 aa9.53□□□□□ -0.88
NEK2-201ENST00000366998 LINC00528Q8N1L1 170 aa9.53□□□□□ -0.88
NEK2-201ENST00000366998 Q6ZQY7 126 aa9.53□□□□□ -0.88
NEK2-201ENST00000366998 DNAH2Q9P225 4427 aa9.52□□□□□ -0.89
NEK2-201ENST00000366998 TMEM256-PLSCR3K7ERE1 68 aa9.52□□□□□ -0.89
NEK2-201ENST00000366998 SDIM1Q6ZPB5 146 aa9.52□□□□□ -0.89
NEK2-201ENST00000366998 A0A1B0GV72 72 aa9.51□□□□□ -0.89
NEK2-201ENST00000366998 ETDCA0A1B0GVM5 59 aa9.51□□□□□ -0.89
NEK2-201ENST00000366998 INAFM2P0DMQ5 153 aa9.5□□□□□ -0.89
NEK2-201ENST00000366998 FUSP35637 526 aaKnown RBP eCLIP9.5□□□□□ -0.89
NEK2-201ENST00000366998 RTL8CO15255 209 aa9.49□□□□□ -0.89
NEK2-201ENST00000366998 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.49□□□□□ -0.89
NEK2-201ENST00000366998 LINC00474Q9P2X8 69 aa9.49□□□□□ -0.89
NEK2-201ENST00000366998 SPRR1AP35321 89 aa9.48□□□□□ -0.89
NEK2-201ENST00000366998 REG3GQ6UW15 175 aa9.48□□□□□ -0.89
NEK2-201ENST00000366998 DPH3Q96FX2 82 aa9.48□□□□□ -0.89
NEK2-201ENST00000366998 B5MCH6 92 aa9.47□□□□□ -0.89
NEK2-201ENST00000366998 C14orf132Q9NPU4 83 aa9.47□□□□□ -0.89
NEK2-201ENST00000366998 KRTAP4-16G5E9R7 235 aaPredicted RBP9.47□□□□□ -0.89
NEK2-201ENST00000366998 Q6ZRX8 168 aa9.47□□□□□ -0.89
NEK2-201ENST00000366998 PHF5AQ7RTV0 110 aaKnown RBP9.47□□□□□ -0.89
NEK2-201ENST00000366998 DNAH17Q9UFH2 4485 aa9.46□□□□□ -0.89
NEK2-201ENST00000366998 HECTD4Q9Y4D8 3996 aa9.46□□□□□ -0.89
NEK2-201ENST00000366998 H3BQ85 93 aa9.46□□□□□ -0.9
NEK2-201ENST00000366998 PANO1I0J062 215 aa9.46□□□□□ -0.9
NEK2-201ENST00000366998 UBE2BP63146 152 aa9.46□□□□□ -0.9
NEK2-201ENST00000366998 OBSCN-AS1Q96MR7 158 aa9.46□□□□□ -0.9
NEK2-201ENST00000366998 CDIP1Q9H305 208 aa9.45□□□□□ -0.9
NEK2-201ENST00000366998 LAMTOR3Q9UHA4 124 aa9.45□□□□□ -0.9
NEK2-201ENST00000366998 IGLV5-52A0A0A0MRZ9 124 aa9.45□□□□□ -0.9
NEK2-201ENST00000366998 JMJD7-PLA2G4BH0Y9G9 81 aa9.45□□□□□ -0.9
NEK2-201ENST00000366998 GHRHP01286 108 aa9.45□□□□□ -0.9
NEK2-201ENST00000366998 TNP2Q05952 138 aa9.45□□□□□ -0.9
NEK2-201ENST00000366998 DHRS4-AS1Q9P1J3 65 aa9.45□□□□□ -0.9
NEK2-201ENST00000366998 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.44□□□□□ -0.9
NEK2-201ENST00000366998 GAGE2AQ6NT46 116 aa9.43□□□□□ -0.9
NEK2-201ENST00000366998 SPACA4Q8TDM5 124 aa9.43□□□□□ -0.9
NEK2-201ENST00000366998 Q9BRP9 147 aa9.43□□□□□ -0.9
NEK2-201ENST00000366998 FAM240AA0A1B0GVK7 77 aa9.42□□□□□ -0.9
NEK2-201ENST00000366998 FAM19A1Q7Z5A9 133 aa9.41□□□□□ -0.9
NEK2-201ENST00000366998 FRAS1Q86XX4 4008 aa9.4□□□□□ -0.9
NEK2-201ENST00000366998 DEFB105AQ8NG35 78 aa9.4□□□□□ -0.91
NEK2-201ENST00000366998 ACYP1P07311 99 aa9.39□□□□□ -0.91
NEK2-201ENST00000366998 RBM3P98179 157 aaKnown RBP9.39□□□□□ -0.91
NEK2-201ENST00000366998 KRTAP11-1Q8IUC1 163 aa9.39□□□□□ -0.91
NEK2-201ENST00000366998 SIGMAR1Q99720 223 aa9.39□□□□□ -0.91
NEK2-201ENST00000366998 PRLHP81277 87 aa9.38□□□□□ -0.91
NEK2-201ENST00000366998 XGP55808 180 aa9.37□□□□□ -0.91
NEK2-201ENST00000366998 NDUFV3P56181 108 aaKnown RBP9.37□□□□□ -0.91
NEK2-201ENST00000366998 HYDINQ4G0P3 5121 aa9.37□□□□□ -0.91
NEK2-201ENST00000366998 ERC2-IT1O76042 136 aa9.36□□□□□ -0.91
NEK2-201ENST00000366998 ST20-AS1Q8NBB2 130 aa9.36□□□□□ -0.91
NEK2-201ENST00000366998 CCKP06307 115 aa9.35□□□□□ -0.91
NEK2-201ENST00000366998 SMCR5Q8TEV8 140 aa9.35□□□□□ -0.91
NEK2-201ENST00000366998 DSCR8Q96T75 97 aa9.35□□□□□ -0.91
NEK2-201ENST00000366998 MT-ATP8P03928 68 aa9.34□□□□□ -0.91
NEK2-201ENST00000366998 Q8N377 158 aa9.34□□□□□ -0.91
NEK2-201ENST00000366998 HIGD2AQ9BW72 106 aa9.34□□□□□ -0.91
NEK2-201ENST00000366998 LINC01547P58512 204 aaPredicted RBP9.34□□□□□ -0.91
NEK2-201ENST00000366998 EPM2AB3EWF7 344 aa9.33□□□□□ -0.92
NEK2-201ENST00000366998 KRTAP10-2P60368 255 aa9.33□□□□□ -0.92
NEK2-201ENST00000366998 UBE2AP49459 152 aa9.32□□□□□ -0.92
NEK2-201ENST00000366998 LOC110117498A0A087WWA1 95 aa9.32□□□□□ -0.92
NEK2-201ENST00000366998 Q6ZQT0 140 aa9.32□□□□□ -0.92
NEK2-201ENST00000366998 PLAC8Q9NZF1 115 aa9.32□□□□□ -0.92
NEK2-201ENST00000366998 DNAH11Q96DT5 4516 aa9.31□□□□□ -0.92
NEK2-201ENST00000366998 IGLV5-48A0A075B6I7 105 aa9.3□□□□□ -0.92
NEK2-201ENST00000366998 BCE1O60756 84 aa9.3□□□□□ -0.92
NEK2-201ENST00000366998 C3orf22Q8N5N4 141 aa9.3□□□□□ -0.92
NEK2-201ENST00000366998 H0Y9J4 135 aa9.29□□□□□ -0.92
NEK2-201ENST00000366998 PDE6GP18545 87 aa9.29□□□□□ -0.92
NEK2-201ENST00000366998 TRBV7-4A0A0J9YYF1 115 aa9.28□□□□□ -0.92
NEK2-201ENST00000366998 LINC00846Q9NV44 126 aa9.28□□□□□ -0.92
NEK2-201ENST00000366998 LCE6AA0A183 80 aa9.28□□□□□ -0.92
NEK2-201ENST00000366998 SACSQ9NZJ4 4579 aa9.27□□□□□ -0.93
NEK2-201ENST00000366998 DNAH5Q8TE73 4624 aa9.26□□□□□ -0.93
NEK2-201ENST00000366998 LINC00643Q86TS7 51 aa9.25□□□□□ -0.93
NEK2-201ENST00000366998 FAT2Q9NYQ8 4349 aa9.25□□□□□ -0.93
NEK2-201ENST00000366998 DNAH8Q96JB1 4490 aa9.25□□□□□ -0.93
NEK2-201ENST00000366998 PKD1P98161 4303 aa9.24□□□□□ -0.93
NEK2-201ENST00000366998 PSORS1C2Q9UIG4 136 aa9.24□□□□□ -0.93
NEK2-201ENST00000366998 FAM30AQ9NZY2 134 aa9.23□□□□□ -0.93
NEK2-201ENST00000366998 KRTAP13-1Q8IUC0 172 aa9.23□□□□□ -0.93
NEK2-201ENST00000366998 F8WEM9 126 aa9.22□□□□□ -0.93
NEK2-201ENST00000366998 KRTAP10-1P60331 282 aa9.21□□□□□ -0.93
NEK2-201ENST00000366998 C1orf137Q5JT78 98 aa9.21□□□□□ -0.93
NEK2-201ENST00000366998 SMIM29Q86T20 159 aa9.21□□□□□ -0.93
NEK2-201ENST00000366998 C21orf62-AS1Q17RA5 79 aa9.21□□□□□ -0.94
NEK2-201ENST00000366998 CIRBP-AS1Q8TBR5 109 aa9.2□□□□□ -0.94
NEK2-201ENST00000366998 UBL5Q9BZL1 73 aa9.2□□□□□ -0.94
NEK2-201ENST00000366998 SCGB1A1P11684 91 aa9.19□□□□□ -0.94
NEK2-201ENST00000366998 SCXQ7RTU7 201 aa9.18□□□□□ -0.94
NEK2-201ENST00000366998 SRRM2Q9UQ35 2752 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms