RNA–Protein interactions for RNA: ENST00000366442.2

SHC1-201, Transcript of SHC adaptor protein 1, humanhuman

TSL 3

Gene SHC1, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-201ENST00000366442 TPRXLQ17RH7 258 aa13.54□□□□□ -0.24
SHC1-201ENST00000366442 C4orf48Q5BLP8 95 aa13.54□□□□□ -0.24
SHC1-201ENST00000366442 IGLV7-46A0A075B6I9 117 aa13.53□□□□□ -0.24
SHC1-201ENST00000366442 TIMM17BO60830 172 aa13.53□□□□□ -0.24
SHC1-201ENST00000366442 COA6Q5JTJ3 125 aaKnown RBP13.53□□□□□ -0.24
SHC1-201ENST00000366442 GAGE2AQ6NT46 116 aa13.53□□□□□ -0.24
SHC1-201ENST00000366442 Q8NBF4 154 aa13.53□□□□□ -0.24
SHC1-201ENST00000366442 LITAFQ99732 161 aa13.53□□□□□ -0.24
SHC1-201ENST00000366442 JOSD1Q15040 202 aaPredicted RBP13.52□□□□□ -0.25
SHC1-201ENST00000366442 CBY1Q9Y3M2 126 aa13.51□□□□□ -0.25
SHC1-201ENST00000366442 ZNF73O43830 326 aaPredicted RBP13.5□□□□□ -0.25
SHC1-201ENST00000366442 C3orf79P0CE67 100 aa13.5□□□□□ -0.25
SHC1-201ENST00000366442 LINC00308Q8TCZ7 52 aa13.5□□□□□ -0.25
SHC1-201ENST00000366442 SPANXCQ9NY87 97 aa13.5□□□□□ -0.25
SHC1-201ENST00000366442 ZNF815PA8K554 130 aa13.48□□□□□ -0.25
SHC1-201ENST00000366442 SPINK1P00995 79 aa13.47□□□□□ -0.25
SHC1-201ENST00000366442 FP248Q71RG6 208 aaPredicted RBP13.47□□□□□ -0.25
SHC1-201ENST00000366442 CDIP1Q9H305 208 aa13.46□□□□□ -0.25
SHC1-201ENST00000366442 SSBP3-AS1Q7Z2R9 100 aa13.45□□□□□ -0.26
SHC1-201ENST00000366442 HINT1P49773 126 aaPredicted RBP13.44□□□□□ -0.26
SHC1-201ENST00000366442 KRTDAPP60985 99 aa13.44□□□□□ -0.26
SHC1-201ENST00000366442 MOBPQ13875 183 aa13.44□□□□□ -0.26
SHC1-201ENST00000366442 MUC17Q685J3 4493 aa13.43□□□□□ -0.26
SHC1-201ENST00000366442 IGLV9-49A0A0B4J1Y8 123 aa13.43□□□□□ -0.26
SHC1-201ENST00000366442 C5orf52A6NGY3 159 aa13.43□□□□□ -0.26
SHC1-201ENST00000366442 TTTY13Q9BZ97 58 aa13.43□□□□□ -0.26
SHC1-201ENST00000366442 C20orf202A1L168 122 aa13.41□□□□□ -0.26
SHC1-201ENST00000366442 RPS29P62273 56 aaKnown RBP13.41□□□□□ -0.26
SHC1-201ENST00000366442 SPANXDQ9BXN6 97 aa13.41□□□□□ -0.26
SHC1-201ENST00000366442 A0A0U1RQV1 116 aa13.4□□□□□ -0.26
SHC1-201ENST00000366442 OR13C6PQ8NH95 151 aa13.4□□□□□ -0.26
SHC1-201ENST00000366442 LINC00518Q8N0U6 118 aa13.38□□□□□ -0.27
SHC1-201ENST00000366442 ST20-AS1Q8NBB2 130 aa13.36□□□□□ -0.27
SHC1-201ENST00000366442 AKR1D1P51857 326 aa13.35□□□□□ -0.27
SHC1-201ENST00000366442 SCGB1D4Q6XE38 83 aa13.35□□□□□ -0.27
SHC1-201ENST00000366442 DHRS4-AS1Q9P1J3 65 aa13.35□□□□□ -0.27
SHC1-201ENST00000366442 ANKRD39Q53RE8 183 aa13.34□□□□□ -0.27
SHC1-201ENST00000366442 COPS9Q8WXC6 57 aa13.33□□□□□ -0.28
SHC1-201ENST00000366442 C9orf153Q5TBE3 101 aa13.32□□□□□ -0.28
SHC1-201ENST00000366442 Q8N377 158 aa13.32□□□□□ -0.28
SHC1-201ENST00000366442 SPRR1BP22528 89 aa13.31□□□□□ -0.28
SHC1-201ENST00000366442 KRTAP13-3Q3SY46 172 aa13.31□□□□□ -0.28
SHC1-201ENST00000366442 IFITM1P13164 125 aa13.3□□□□□ -0.28
SHC1-201ENST00000366442 ELOF1P60002 83 aaKnown RBP13.3□□□□□ -0.28
SHC1-201ENST00000366442 Q6ZVH6 145 aa13.3□□□□□ -0.28
SHC1-201ENST00000366442 SLC25A20O43772 301 aa13.29□□□□□ -0.28
SHC1-201ENST00000366442 SLC25A34Q6PIV7 304 aa13.29□□□□□ -0.28
SHC1-201ENST00000366442 ATOH7Q8N100 152 aa13.29□□□□□ -0.28
SHC1-201ENST00000366442 COX7BP24311 80 aa13.28□□□□□ -0.28
SHC1-201ENST00000366442 C6orf99Q4VX62 202 aa13.28□□□□□ -0.28
SHC1-201ENST00000366442 TRBV7-6A0A0J9YX20 115 aa13.26□□□□□ -0.29
SHC1-201ENST00000366442 SNRPEP62304 92 aaKnown RBP13.26□□□□□ -0.29
SHC1-201ENST00000366442 PCP2Q8IVA1 136 aa13.25□□□□□ -0.29
SHC1-201ENST00000366442 FAT4Q6V0I7 4981 aa13.24□□□□□ -0.29
SHC1-201ENST00000366442 LAMTOR3Q9UHA4 124 aa13.22□□□□□ -0.29
SHC1-201ENST00000366442 MUSTN1Q8IVN3 82 aa13.21□□□□□ -0.29
SHC1-201ENST00000366442 A0A1B0GWB2 263 aa13.2□□□□□ -0.3
SHC1-201ENST00000366442 HIST3H2BBQ8N257 126 aa13.2□□□□□ -0.3
SHC1-201ENST00000366442 A6NDN8 102 aa13.19□□□□□ -0.3
SHC1-201ENST00000366442 HIST1H2BLQ99880 126 aa13.18□□□□□ -0.3
SHC1-201ENST00000366442 S100A2P29034 98 aa13.17□□□□□ -0.3
SHC1-201ENST00000366442 TAL2Q16559 108 aa13.17□□□□□ -0.3
SHC1-201ENST00000366442 ASB16-AS1Q495Z4 193 aa13.17□□□□□ -0.3
SHC1-201ENST00000366442 TEX49A0A1B0GTD5 131 aa13.16□□□□□ -0.3
SHC1-201ENST00000366442 TRAV13-2A0A0B4J235 113 aa13.15□□□□□ -0.3
SHC1-201ENST00000366442 LIMD2Q9BT23 127 aa13.15□□□□□ -0.3
SHC1-201ENST00000366442 A4D1N5 150 aa13.14□□□□□ -0.31
SHC1-201ENST00000366442 S100A1P23297 94 aa13.14□□□□□ -0.31
SHC1-201ENST00000366442 DEFB105AQ8NG35 78 aa13.13□□□□□ -0.31
SHC1-201ENST00000366442 LCE2AQ5TA79 106 aaPredicted RBP13.12□□□□□ -0.31
SHC1-201ENST00000366442 IGLV5-48A0A075B6I7 105 aa13.11□□□□□ -0.31
SHC1-201ENST00000366442 HSBP1L1C9JCN9 74 aa13.11□□□□□ -0.31
SHC1-201ENST00000366442 Q1RN00 199 aa13.11□□□□□ -0.31
SHC1-201ENST00000366442 SEC61BP60468 96 aaKnown RBP13.1□□□□□ -0.31
SHC1-201ENST00000366442 CD164Q04900 197 aa13.1□□□□□ -0.31
SHC1-201ENST00000366442 LINC01547P58512 204 aaPredicted RBP13.09□□□□□ -0.31
SHC1-201ENST00000366442 HRCT1Q6UXD1 115 aa13.09□□□□□ -0.31
SHC1-201ENST00000366442 SMIM11BQ8TCY0 68 aa13.09□□□□□ -0.31
SHC1-201ENST00000366442 PRO1933Q9H354 126 aa13.09□□□□□ -0.31
SHC1-201ENST00000366442 S100A6P06703 90 aa13.08□□□□□ -0.32
SHC1-201ENST00000366442 SMIM29Q86T20 159 aa13.08□□□□□ -0.32
SHC1-201ENST00000366442 NHP2Q9NX24 153 aaKnown RBP13.08□□□□□ -0.32
SHC1-201ENST00000366442 XP32Q5T750 250 aa13.07□□□□□ -0.32
SHC1-201ENST00000366442 H7C2G1 150 aa13.02□□□□□ -0.33
SHC1-201ENST00000366442 VAMP3Q15836 100 aa13.01□□□□□ -0.33
SHC1-201ENST00000366442 Q5XG85 94 aa13.01□□□□□ -0.33
SHC1-201ENST00000366442 KRTAP4-1Q9BYQ7 146 aa12.97□□□□□ -0.33
SHC1-201ENST00000366442 SCGB1D1O95968 90 aa12.96□□□□□ -0.33
SHC1-201ENST00000366442 LINC00575Q6W349 94 aa12.96□□□□□ -0.33
SHC1-201ENST00000366442 COX8AP10176 69 aa12.92□□□□□ -0.34
SHC1-201ENST00000366442 hADV29S1A0JD25 119 aa12.91□□□□□ -0.34
SHC1-201ENST00000366442 HIST1H4GQ99525 98 aa12.91□□□□□ -0.34
SHC1-201ENST00000366442 A0A0G2JQZ4 141 aa12.9□□□□□ -0.34
SHC1-201ENST00000366442 F8WEM9 126 aa12.89□□□□□ -0.35
SHC1-201ENST00000366442 DLEU1O43261 78 aa12.89□□□□□ -0.35
SHC1-201ENST00000366442 C1orf195Q5TG92 126 aa12.89□□□□□ -0.35
SHC1-201ENST00000366442 Q6ZQY7 126 aa12.89□□□□□ -0.35
SHC1-201ENST00000366442 C9orf92A6NGG3 77 aa12.88□□□□□ -0.35
SHC1-201ENST00000366442 BVES-AS1Q5T3Y7 98 aa12.86□□□□□ -0.35
SHC1-201ENST00000366442 C12orf57Q99622 126 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms