RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 DSCR8Q96T75 97 aa14.77□□□□□ -0.04
LDB1-201ENST00000361198 COX7BP24311 80 aa14.77□□□□□ -0.05
LDB1-201ENST00000361198 M0R378 163 aa14.76□□□□□ -0.05
LDB1-201ENST00000361198 FAM19A1Q7Z5A9 133 aa14.76□□□□□ -0.05
LDB1-201ENST00000361198 M0R2N4 97 aa14.75□□□□□ -0.05
LDB1-201ENST00000361198 GHRHP01286 108 aa14.74□□□□□ -0.05
LDB1-201ENST00000361198 CYSTM1Q9H1C7 97 aa14.73□□□□□ -0.05
LDB1-201ENST00000361198 RMI2Q96E14 147 aa14.72□□□□□ -0.05
LDB1-201ENST00000361198 TRBV7-4A0A0J9YYF1 115 aa14.71□□□□□ -0.05
LDB1-201ENST00000361198 Q6ZVQ6 151 aa14.69□□□□□ -0.06
LDB1-201ENST00000361198 LINC01547P58512 204 aaPredicted RBP14.69□□□□□ -0.06
LDB1-201ENST00000361198 TLX1NBP0CAT3 122 aa14.68□□□□□ -0.06
LDB1-201ENST00000361198 LINC00528Q8N1L1 170 aa14.68□□□□□ -0.06
LDB1-201ENST00000361198 SERTAD4-AS1Q5TG53 156 aa14.68□□□□□ -0.06
LDB1-201ENST00000361198 DNAH10Q8IVF4 4471 aa14.68□□□□□ -0.06
LDB1-201ENST00000361198 B9D2Q9BPU9 175 aa14.66□□□□□ -0.06
LDB1-201ENST00000361198 CSMD3Q7Z407 3707 aa14.65□□□□□ -0.06
LDB1-201ENST00000361198 KRTAP1-5Q9BYS1 174 aa14.65□□□□□ -0.06
LDB1-201ENST00000361198 CXCL6P80162 114 aa14.64□□□□□ -0.07
LDB1-201ENST00000361198 NKAPP1Q8N9T2 125 aa14.64□□□□□ -0.07
LDB1-201ENST00000361198 DYNC2H1Q8NCM8 4307 aaKnown RBP14.63□□□□□ -0.07
LDB1-201ENST00000361198 BCE1O60756 84 aa14.63□□□□□ -0.07
LDB1-201ENST00000361198 TMEM258P61165 79 aa14.63□□□□□ -0.07
LDB1-201ENST00000361198 HAMPP81172 84 aa14.62□□□□□ -0.07
LDB1-201ENST00000361198 APLNQ9ULZ1 77 aa14.62□□□□□ -0.07
LDB1-201ENST00000361198 C7orf33Q8WU49 177 aa14.62□□□□□ -0.07
LDB1-201ENST00000361198 TENM2Q9NT68 2774 aa14.6□□□□□ -0.07
LDB1-201ENST00000361198 FAM168BA1KXE4 195 aa14.6□□□□□ -0.07
LDB1-201ENST00000361198 DNAH7Q8WXX0 4024 aa14.6□□□□□ -0.07
LDB1-201ENST00000361198 RPS28P62857 69 aaKnown RBP14.59□□□□□ -0.07
LDB1-201ENST00000361198 PLA2G2DQ9UNK4 145 aa14.59□□□□□ -0.07
LDB1-201ENST00000361198 KCNQ1DNQ9H478 68 aa14.58□□□□□ -0.08
LDB1-201ENST00000361198 PLECQ15149 4684 aaKnown RBP14.58□□□□□ -0.08
LDB1-201ENST00000361198 UBE2DNLQ8IWF7 75 aa14.58□□□□□ -0.08
LDB1-201ENST00000361198 J3KT08 172 aa14.57□□□□□ -0.08
LDB1-201ENST00000361198 KRTAP7-1Q8IUC3 87 aa14.55□□□□□ -0.08
LDB1-201ENST00000361198 TRAV7A0A075B6U4 112 aa14.53□□□□□ -0.08
LDB1-201ENST00000361198 LOC107984640A0A0U1RRK4 108 aa14.53□□□□□ -0.08
LDB1-201ENST00000361198 RPL37AP8A6NKH3 93 aa14.53□□□□□ -0.08
LDB1-201ENST00000361198 IGLV5-37A0A075B6J1 123 aa14.52□□□□□ -0.08
LDB1-201ENST00000361198 DPH3Q96FX2 82 aa14.5□□□□□ -0.09
LDB1-201ENST00000361198 IGLV1-50A0A075B6I6 118 aa14.49□□□□□ -0.09
LDB1-201ENST00000361198 PSCAO43653 123 aa14.49□□□□□ -0.09
LDB1-201ENST00000361198 PRKDCP78527 4128 aaKnown RBP14.49□□□□□ -0.09
LDB1-201ENST00000361198 FAM19A5Q7Z5A7 132 aaPredicted RBP14.48□□□□□ -0.09
LDB1-201ENST00000361198 C20orf197Q8N268 126 aa14.48□□□□□ -0.09
LDB1-201ENST00000361198 KRTAP4-16G5E9R7 235 aaPredicted RBP14.45□□□□□ -0.1
LDB1-201ENST00000361198 MRPL55Q7Z7F7 128 aaKnown RBP14.45□□□□□ -0.1
LDB1-201ENST00000361198 PRYO14603 147 aa14.44□□□□□ -0.1
LDB1-201ENST00000361198 Q8N377 158 aa14.44□□□□□ -0.1
LDB1-201ENST00000361198 SPRR1AP35321 89 aa14.43□□□□□ -0.1
LDB1-201ENST00000361198 CNBPP62633 177 aaKnown RBP14.43□□□□□ -0.1
LDB1-201ENST00000361198 SCXQ7RTU7 201 aa14.43□□□□□ -0.1
LDB1-201ENST00000361198 IGLV5-48A0A075B6I7 105 aa14.43□□□□□ -0.1
LDB1-201ENST00000361198 Q6ZRX8 168 aa14.43□□□□□ -0.1
LDB1-201ENST00000361198 STARD9Q9P2P6 4700 aa14.42□□□□□ -0.1
LDB1-201ENST00000361198 NUPR2A6NF83 97 aa14.41□□□□□ -0.1
LDB1-201ENST00000361198 A0A096LNI7 61 aa14.41□□□□□ -0.1
LDB1-201ENST00000361198 DHRS4-AS1Q9P1J3 65 aa14.41□□□□□ -0.1
LDB1-201ENST00000361198 KLKP1Q107X0 134 aa14.4□□□□□ -0.1
LDB1-201ENST00000361198 Q9BRP9 147 aa14.4□□□□□ -0.1
LDB1-201ENST00000361198 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.4□□□□□ -0.1
LDB1-201ENST00000361198 ETDCA0A1B0GVM5 59 aa14.39□□□□□ -0.11
LDB1-201ENST00000361198 IGKV2-24A0A0C4DH68 120 aa14.39□□□□□ -0.11
LDB1-201ENST00000361198 DNHD1Q96M86 4753 aa14.39□□□□□ -0.11
LDB1-201ENST00000361198 C16orf90A8MZG2 172 aa14.38□□□□□ -0.11
LDB1-201ENST00000361198 DEFB105AQ8NG35 78 aa14.38□□□□□ -0.11
LDB1-201ENST00000361198 H7BZZ5 65 aa14.37□□□□□ -0.11
LDB1-201ENST00000361198 NBDYA0A0U1RRE5 68 aa14.36□□□□□ -0.11
LDB1-201ENST00000361198 NREPQ16612 68 aa14.36□□□□□ -0.11
LDB1-201ENST00000361198 OXTP01178 125 aa14.34□□□□□ -0.11
LDB1-201ENST00000361198 C14orf177Q52M58 125 aa14.34□□□□□ -0.11
LDB1-201ENST00000361198 A0A1B0GW54 56 aa14.34□□□□□ -0.11
LDB1-201ENST00000361198 A0A1W2PNN7 141 aa14.34□□□□□ -0.11
LDB1-201ENST00000361198 MEGF8Q7Z7M0 2845 aa14.33□□□□□ -0.12
LDB1-201ENST00000361198 IGKV4-1P06312 121 aa14.32□□□□□ -0.12
LDB1-201ENST00000361198 TNP2Q05952 138 aa14.32□□□□□ -0.12
LDB1-201ENST00000361198 LRCOL1A6NCL2 159 aa14.31□□□□□ -0.12
LDB1-201ENST00000361198 REG3GQ6UW15 175 aa14.31□□□□□ -0.12
LDB1-201ENST00000361198 VPS13DQ5THJ4 4388 aa14.31□□□□□ -0.12
LDB1-201ENST00000361198 ST20-AS1Q8NBB2 130 aa14.3□□□□□ -0.12
LDB1-201ENST00000361198 C3orf84H3BNL1 204 aa14.3□□□□□ -0.12
LDB1-201ENST00000361198 BPY2O14599 106 aa14.3□□□□□ -0.12
LDB1-201ENST00000361198 FAM236DA0A1B0GTK5 79 aa14.29□□□□□ -0.12
LDB1-201ENST00000361198 ERC2-IT1O76042 136 aa14.29□□□□□ -0.12
LDB1-201ENST00000361198 FAM236CP0DP71 79 aa14.29□□□□□ -0.12
LDB1-201ENST00000361198 Q8N9L7 120 aa14.29□□□□□ -0.12
LDB1-201ENST00000361198 Q6ZRN7 208 aaPredicted RBP14.28□□□□□ -0.12
LDB1-201ENST00000361198 CHTF8P0CG12 524 aa14.27□□□□□ -0.12
LDB1-201ENST00000361198 UBE2BP63146 152 aa14.27□□□□□ -0.12
LDB1-201ENST00000361198 FUSP35637 526 aaKnown RBP eCLIP14.27□□□□□ -0.131e-7■□□□□ 9.1
LDB1-201ENST00000361198 SNURFQ9Y675 71 aa14.27□□□□□ -0.13
LDB1-201ENST00000361198 A0A1W2PNM2 257 aa14.26□□□□□ -0.13
LDB1-201ENST00000361198 C9orf163Q8N9P6 203 aa14.25□□□□□ -0.13
LDB1-201ENST00000361198 C1orf137Q5JT78 98 aa14.24□□□□□ -0.13
LDB1-201ENST00000361198 NDUFC1O43677 76 aa14.22□□□□□ -0.13
LDB1-201ENST00000361198 EPM2AB3EWF7 344 aa14.22□□□□□ -0.13
LDB1-201ENST00000361198 Q8NBF4 154 aa14.22□□□□□ -0.13
LDB1-201ENST00000361198 SPRR4Q96PI1 79 aa14.21□□□□□ -0.14
LDB1-201ENST00000361198 OCR1Q9BZK8 76 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 179.7 ms